EY685340

Overview
NameEY685340
Unique NameEY685340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5655 contig Csv1_Contig5655:145..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX12_ORYSI (Homeobox-leucine zipper protein HOX12 OS=Oryza sativa subsp. indica GN=HOX12 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15
Identity = 46/104 (44.23%), Postives = 64/104 (61.54%), Query Frame = 1
Query:  178 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSR 489
            + G     KKRRL+ EQ + LE +F+   KLE  RK+QLA  LGL  +QVA+WFQNRRAR K+K +E+++  L+  ++AV         QN  L  E++ LK R
Sbjct:   53 ESGGDEQAKKRRLSDEQARFLEMSFKKERKLETPRKVQLAAELGLDAKQVAVWFQNRRARHKSKLMEEEFAKLRSAHDAV-------VLQNCHLETELLKLKER 149          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.264e-15
Identity = 55/146 (37.67%), Postives = 80/146 (54.79%), Query Frame = 1
Query:   91 GVASFLGKRSMSFSGIDAGEEANGEDDFS---------DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKSREVTE 501
            GV+SF   R +     D GEE+  E++ +         D+   +  KK RL  +Q   LE++F+  + L P++K  LAR L L+PRQV +WFQNRRAR K KQ E D + LK+         E L  +N +L  EI  LK+ ++T+
Sbjct:   68 GVSSFSSGRVVKRER-DGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCC-------ETLADENIRLQKEIQELKTLKLTQ 205          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.957e-15
Identity = 44/101 (43.56%), Postives = 62/101 (61.39%), Query Frame = 1
Query:  163 EDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            ++D S +G  +  KK RL+ EQ   LE+ F+  + L P++KM LA+ L L+ RQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ +  +L A
Sbjct:  149 DEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRA 249          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.957e-15
Identity = 48/116 (41.38%), Postives = 64/116 (55.17%), Query Frame = 1
Query:  136 IDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALK 483
            +D        D+  D G +   KK RL+ +Q   LE  F+  N L P++K+ LA+ LGL  RQV +WFQNRRAR K KQ E D + LKR  E +  +   L    +K  AE+ ALK
Sbjct:  113 LDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRL----EKEAAELRALK 224          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSJ (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. japonica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 48/110 (43.64%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  142 AGEEANGEDDFSDDGS--QAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            AG    G  D  D G       KK RL+ +Q   LE +F     L P +K  LA+ LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ + Q+L A
Sbjct:   60 AGLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRA 169          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.862e-15
Identity = 48/110 (43.64%), Postives = 60/110 (54.55%), Query Frame = 1
Query:  142 AGEEANGEDDFSDDGS--QAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            AG    G  D  D G       KK RL+ +Q   LE +F     L P +K  LA+ LGL+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ + Q+L A
Sbjct:   60 AGLRGGGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRA 169          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  178 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 486
            DD      KK RL+ EQ   LE  F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:   86 DDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTEENRRLHRELQQLRA 181          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.045e-15
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 1
Query:  178 DDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 486
            DD      KK RL+ EQ   LE  F+  + L P++K+ LA+ L L+PRQV +WFQNRRAR K KQ E D +LLKR         E L  +N++LH E+  L++
Sbjct:   86 DDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCC-------ETLTEENRRLHRELQQLRA 181          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.468e-14
Identity = 50/124 (40.32%), Postives = 68/124 (54.84%), Query Frame = 1
Query:   94 VASFLGKRSMSFSGIDAGEEANGEDDFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHA 465
            V+S  GKRS      D        DD   D S+   KK RL+ +Q   LE+ F+  + L P++K  LA+ LGL+ RQV +WFQNRRAR K KQ E D + L+R  E +  +   LQ +  +L A
Sbjct:   96 VSSSTGKRSEREEDTDPQGSRGISDDEDGDNSR---KKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRA 216          
BLAST of EY685340 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.270e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 1
Query:  169 DFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYEAVKADREALQAQNQKLHAEIMALKS 486
            D  D+G     KK RL+ EQ   LE +F+  + L P++K  LA  L L+PRQV +WFQNRRAR K KQ E D + LKR  E +  +   LQ +  +L   +    S
Sbjct:  142 DDEDNGGGGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTS 247          
The following BLAST results are available for this feature:
BLAST of EY685340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
HOX12_ORYSI2.264e-1544.23Homeobox-leucine zipper protein HOX12 OS=Oryza sat... [more]
HAT9_ARATH2.264e-1537.67Homeobox-leucine zipper protein HAT9 OS=Arabidopsi... [more]
HAT3_ARATH2.957e-1543.56Homeobox-leucine zipper protein HAT3 OS=Arabidopsi... [more]
HAT1_ARATH2.957e-1541.38Homeobox-leucine zipper protein HAT1 OS=Arabidopsi... [more]
HOX17_ORYSJ3.862e-1543.64Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HOX17_ORYSI3.862e-1543.64Homeobox-leucine zipper protein HOX17 OS=Oryza sat... [more]
HOX15_ORYSJ5.045e-1544.66Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]
HOX15_ORYSI5.045e-1544.66Homeobox-leucine zipper protein HOX15 OS=Oryza sat... [more]
HAT4_ARATH1.468e-1440.32Homeobox-leucine zipper protein HAT4 OS=Arabidopsi... [more]
HOX7_ORYSJ4.270e-1441.51Homeobox-leucine zipper protein HOX7 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-H03-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685340 ID=EY685340; Name=EY685340; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGAACTCCCCATGAAGATGAACATCAAACCCCCACTTCTCT
CAATCCAATTCTTCCCTCTTGTGCTCCCCAAGACTTTCATGGGGTTGCAT
CTTTCTTAGGGAAGCGATCAATGTCATTTTCAGGGATTGATGCGGGAGAA
GAAGCAAATGGGGAGGATGATTTTTCTGATGATGGATCACAAGCAGGAGA
GAAGAAGAGGAGGCTTAATATGGAACAAGTGAAGACTCTTGAGAAGAACT
TTGAATTGGGTAACAAGCTTGAGCCAGAGAGAAAAATGCAGTTGGCTAGG
GCTCTTGGGCTGCAACCAAGACAGGTTGCTATTTGGTTCCAAAACAGGAG
AGCCAGATGGAAGACCAAGCAGCTGGAGAAAGACTATGATCTTCTCAAGA
GACAATATGAAGCAGTCAAAGCCGATCGCGAAGCACTCCAAGCTCAAAAT
CAGAAGCTTCATGCAGAGATAATGGCTCTGAAAAGCAGGGAGGTGACTGA
ATCTATAAACCTCAATAAAGAAACTGAGGGGTCTTGCAGCAATAGAAGTG
AGAACAGTTCTGATATCAAGTTGGATATTTCAAGGACACCAGCCATTGAC
AGCCCTATGTCTACTCATCCAACAAGCAGAAACTTGTTTCCAACAAAATC
AACATCGTCGGTAAGGCCAACAGTAGCAGCACAACTTTTCCATAACTCAT
CATCGTCAAGGCCTGATCTTCAATGCCAGAAGATTGAACAGAATATGCCG
GGTACTAAAGATCAAGAAAGCCTTAACAACATGTTCTGTGGCATGGAGGA
TCCATCTGGATTCTGGCCCTGGGTTGGAACAAACCAATTTTCCGGTTGAA
TTAATTCTCCCTCGCCTCCCAAAAAACCTAAAGGGCCAAATTTGAAATAA
CCCCC
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