EY685334

Overview
NameEY685334
Unique NameEY685334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length493
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25_PUCGR (60S ribosomal protein L25 OS=Puccinia graminis PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 6.194e-20
Identity = 49/86 (56.98%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            +D Y+ L  PL TESAMKKIEDNNTL+F                 +YD+   +VNTLIRPDG KKA+VRLTP+ DALD+ANKIG I
Sbjct:   73 MDAYRTLVRPLNTESAMKKIEDNNTLLFIVDLKANKRQIADAVKKLYDVTPLRVNTLIRPDGKKKAFVRLTPEVDALDIANKIGFI 158          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25_KLULA (60S ribosomal protein L25 OS=Kluyveromyces lactis GN=RPL25 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.015e-19
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD Y++++ P+T+E+AMKK+ED NTLVF                 +Y++    VNTL+RP+GTKKAYVRLT D DALD+AN+IG I
Sbjct:   57 LDSYKVIEQPITSETAMKKVEDGNTLVFKVSLKANKYQIKKAVKELYEVDVLSVNTLVRPNGTKKAYVRLTADFDALDIANRIGYI 142          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25_YEAST (60S ribosomal protein L25 OS=Saccharomyces cerevisiae GN=RPL25 PE=1 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 5.244e-19
Identity = 44/86 (51.16%), Postives = 59/86 (68.60%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD Y++++ P+T+E+AMKK+ED N LVF                 +Y++   KVNTL+RP+GTKKAYVRLT D DALD+AN+IG I
Sbjct:   57 LDSYKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTKKAYVRLTADYDALDIANRIGYI 142          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25_PICJA (60S ribosomal protein L25 OS=Pichia jadinii GN=RPL25 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-19
Identity = 45/86 (52.33%), Postives = 58/86 (67.44%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD+Y+++  P+ +E+AMKK+ED NTLVF                 +Y++    VNTLIRP+GTKKAYVRLT D DALD+ANKIG I
Sbjct:   57 LDNYKVIVAPIASETAMKKVEDGNTLVFQVDIKANKHQIKQAVKDLYEVDVLAVNTLIRPNGTKKAYVRLTADHDALDIANKIGYI 142          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25B_SCHPO (60S ribosomal protein L25-B OS=Schizosaccharomyces pombe GN=rpl25b PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.944e-19
Identity = 45/86 (52.33%), Postives = 60/86 (69.77%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD Y+I+  P+ +ESAMKKIED+NTLVF                 +Y + A K+NTLIRP+GTKKA+V+L+ D+DALDVAN+IG +
Sbjct:   56 LDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKNAVKKLYSVDAVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL25A_SCHPO (60S ribosomal protein L25-A OS=Schizosaccharomyces pombe GN=rpl25a PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.993e-18
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD Y+I+  P+ +ESAMKKIED+NTLVF                 +Y ++  K+NTLIRP+GTKKA+V+L+ D+DALDVAN+IG +
Sbjct:   56 LDEYKIIVNPINSESAMKKIEDDNTLVFHVHLKANKFTIKEAVRKLYSVEPVKINTLIRPNGTKKAFVKLSADADALDVANRIGFL 141          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL23A_TRYBB (60S ribosomal protein L23a OS=Trypanosoma brucei brucei GN=RPL23A PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.993e-18
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1
Query:    4 DHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            D ++I++YPLTT+ AMKKIE+NNTL F                 +Y ++  KVNTLIRPDG KKAY+RL+   DALD ANK+G++
Sbjct:   80 DAFRIIRYPLTTDKAMKKIEENNTLTFIVDSRANKTEIKKAIRKLYQVKTVKVNTLIRPDGLKKAYIRLSASYDALDTANKMGLV 164          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: R23A2_CAEEL (60S ribosomal protein L23a 2 OS=Caenorhabditis elegans GN=rpl-25.2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.758e-17
Identity = 47/86 (54.65%), Postives = 56/86 (65.12%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            LD + ++K P TTES+MKKIED+NTLVF                 +Y+++A KVNTLI P   KKAYVRL  D DALDVANKIG I
Sbjct:   61 LDSFAVIKAPHTTESSMKKIEDHNTLVFIVDEKANKHHIKRAVHALYNVKAVKVNTLITPLQQKKAYVRLASDYDALDVANKIGFI 146          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RL23A_DICDI (60S ribosomal protein L23a OS=Dictyostelium discoideum GN=rpl23a PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 8.371e-17
Identity = 43/86 (50.00%), Postives = 57/86 (66.28%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGII 258
            +D ++ILK PLTTESA +KIE +NT+ F                 MYD++ K+VNTLI P G KKA+V L+P+ +A DVANKIG+I
Sbjct:   84 MDQFRILKAPLTTESATQKIEGSNTITFMVDMFANKSQVADAVAKMYDVKVKRVNTLITPRGEKKAFVTLSPEFEAADVANKIGLI 169          
BLAST of EY685334 vs. ExPASy Swiss-Prot
Match: RK23_SPIOL (50S ribosomal protein L23, chloroplastic OS=Spinacia oleracea GN=RPL23 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 1
Query:    1 LDHYQILKYPLTTESAMKKIEDNNTLVFXXXXXXXXXXXXXXXXXMYDIQAKKVNTLIRPDGTKKAYVRLTPDSDALDVANKIGI 255
            LD YQIL+ P+ TE+A+K I D N+L+F                  + ++ +KVNTLIRPDGTKKAY+ L  + +A ++A KIGI
Sbjct:  109 LDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPDGTKKAYIMLNKEYNASELAKKIGI 193          
The following BLAST results are available for this feature:
BLAST of EY685334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
RL25_PUCGR6.194e-2056.9860S ribosomal protein L25 OS=Puccinia graminis PE=... [more]
RL25_KLULA4.015e-1951.1660S ribosomal protein L25 OS=Kluyveromyces lactis ... [more]
RL25_YEAST5.244e-1951.1660S ribosomal protein L25 OS=Saccharomyces cerevis... [more]
RL25_PICJA8.944e-1952.3360S ribosomal protein L25 OS=Pichia jadinii GN=RPL... [more]
RL25B_SCHPO8.944e-1952.3360S ribosomal protein L25-B OS=Schizosaccharomyces... [more]
RL25A_SCHPO1.993e-1851.1660S ribosomal protein L25-A OS=Schizosaccharomyces... [more]
RL23A_TRYBB1.993e-1850.5960S ribosomal protein L23a OS=Trypanosoma brucei b... [more]
R23A2_CAEEL3.758e-1754.6560S ribosomal protein L23a 2 OS=Caenorhabditis ele... [more]
RL23A_DICDI8.371e-1750.0060S ribosomal protein L23a OS=Dictyostelium discoi... [more]
RK23_SPIOL1.131e-1344.7150S ribosomal protein L23, chloroplastic OS=Spinac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-G04-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685334 ID=EY685334; Name=EY685334; organism=Citrus sinensis; type=EST; length=493bp
CTTGACCATTATCAGATTCTCAAGTACCCACTCACCACTGAATCAGCAAT
GAAGAAAATTGAAGACAACAATACTCTGGTTTTCATTGTTGACATACGGG
CTGATAAGAAAAAGATAAAGGATGCAGTTAAGAAGATGTATGATATCCAG
GCTAAGAAAGTGAATACCTTGATCAGGCCCGATGGTACAAAGAAGGCTTA
TGTCAGGTTGACACCAGACTCTGATGCTTTGGACGTAGCAAACAAGATTG
GAATCATTTAAACAATTGATCTTTCATTCACATTTTTGTGTATTTTTTAA
TCCAAAAAGTTAGTTATGTTAAGACCTCAAACAAAGATTTCCAAATTTGT
TCCTGTTAACTGTTTATGAATTTTATCCCCTGCATTAACAAATTGGTGGG
TGCATGAAATAATGCACTGGTCTGATAATGCTATTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
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