EY685325

Overview
NameEY685325
Unique NameEY685325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1047
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_ECO27 (Betaine aldehyde dehydrogenase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=betB PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.216e-20
Identity = 53/102 (51.96%), Postives = 68/102 (66.67%), Query Frame = 1
Query:   55 SGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVN-GGAFNTNAPFGGYKHSG-GRARG 354
            +G +V PTVF + ++DMTI REEIFGPV+SI+ Y+ E + +R AN T+YGLA G+ + D +RA RV  QL AG   +N  G      P GGYKHSG GR  G
Sbjct:  365 NGAWVAPTVFTDCSDDMTIVREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: PUUC_ECOLI (Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase OS=Escherichia coli (strain K12) GN=puuC PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.894e-20
Identity = 52/114 (45.61%), Postives = 75/114 (65.79%), Query Frame = 1
Query:   28 VDGRETGLASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNG-GAFNTNAPFGGYKHSG-GRARGPHA 363
            +DGR  GLA+   +GPT+F +V  + +++REEIFGPVL +  +  E  A+++AN ++YGL   VW+ D  RA R++R+L+AG V VN     +   PFGGYK SG GR +  HA
Sbjct:  368 LDGRNAGLAAA--IGPTIFVDVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYNDGDMTVPFGGYKQSGNGRDKSLHA 479          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_PSEF5 (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=betB PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.894e-20
Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   13 GPDSRVDGRETGLASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNG-GAFNTNAPFGGYKHSG-GRARG 354
            G +   DG     A G FV PTVF + T+DMTI REEIFGPV++I+ Y+ E + +R AN T++GLA G+ + D +RA RV  QL AG   +N  G  +   P GGYK SG GR  G
Sbjct:  354 GGERLTDGE---FAKGAFVAPTVFTDCTDDMTIVREEIFGPVMAILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_PSEPK (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain KT2440) GN=betB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.780e-20
Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 1
Query:   52 ASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNG-GAFNTNAPFGGYKHSG-GRARG 354
            A G FV PTVF + T+DMTI +EEIFGPV+SI+ Y+ E + +R AN T+YGLA GV + D  RA R+  +L AG   +N  G      P GGYK SG GR  G
Sbjct:  364 AKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_PSEP1 (Betaine aldehyde dehydrogenase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=betB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.780e-20
Identity = 53/103 (51.46%), Postives = 66/103 (64.08%), Query Frame = 1
Query:   52 ASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNG-GAFNTNAPFGGYKHSG-GRARG 354
            A G FV PTVF + T+DMTI +EEIFGPV+SI+ Y+ E + +R AN T+YGLA GV + D  RA R+  +L AG   +N  G      P GGYK SG GR  G
Sbjct:  364 AKGAFVAPTVFTDCTDDMTIVKEEIFGPVMSILTYETEEEVIRRANDTDYGLAAGVCTNDITRAHRIIHKLEAGICWINAWGESPAEMPVGGYKQSGVGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_PSEFS (Betaine aldehyde dehydrogenase OS=Pseudomonas fluorescens (strain SBW25) GN=betB PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.780e-20
Identity = 56/116 (48.28%), Postives = 72/116 (62.07%), Query Frame = 1
Query:   13 GPDSRVDGRETGLASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNG-GAFNTNAPFGGYKHSG-GRARG 354
            G D   DG     A G +V PTVF + T++MTI REEIFGPV+SI+ Y+ E + +R AN T++GLA G+ + D +RA RV  QL AG   +N  G  +   P GGYK SG GR  G
Sbjct:  354 GGDRLTDG---DFAKGAYVAPTVFTDCTDEMTIVREEIFGPVMSILTYETEEEVIRRANDTDFGLAAGLVTKDLNRAHRVIHQLEAGICWINAWGESDAKMPVGGYKQSGVGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.937e-20
Identity = 56/106 (52.83%), Postives = 69/106 (65.09%), Query Frame = 1
Query:   58 GYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNGGAFNT---NAPFGGYKHSG-GRARGPHA 363
            GYF+ PT+F+NVTEDM I +EEIFGPV +I  +K +AD ++I N T YGLA  V + +   A  VA  LRAG V VN  ++NT     PFGGYK SG GR  G  A
Sbjct:  374 GYFIEPTIFSNVTEDMKIQQEEIFGPVCTISKFKTKADVIKIGNNTTYGLAAAVHTSNLTTAIEVANALRAGTVWVN--SYNTLHWQLPFGGYKESGIGRELGEAA 477          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 4.937e-20
Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 1
Query:   58 GYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVNGG-AFNTNAPFGGYKHSG-GRARGPH 360
            G+FV PTVF+NVT++M IA+EEIFGPV  IM +K   D ++ AN T YGLA GV++ D D+A  V+  L+AG V VN   A     PFGG+K SG GR  G H
Sbjct:  379 GFFVQPTVFSNVTDEMRIAKEEIFGPVQQIMKFKSMDDVIKRANNTTYGLAAGVFTKDLDKAITVSSALQAGMVWVNCYLAVPVQCPFGGFKMSGNGRELGEH 481          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_SHIF8 (Betaine aldehyde dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) GN=betB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.448e-20
Identity = 52/105 (49.52%), Postives = 68/105 (64.76%), Query Frame = 1
Query:   46 GLASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVN-GGAFNTNAPFGGYKHSG-GRARG 354
            G  +G +V PTVF +  ++MTI REEIFGPV+S++ Y+ E + +R AN T+YGLA G+ + D +RA RV  QL AG   +N  G      P GGYKHSG GR  G
Sbjct:  362 GFDNGAWVAPTVFTDCRDEMTIVREEIFGPVMSLLTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVMHQLEAGICWINTWGESPAEMPVGGYKHSGIGRENG 466          
BLAST of EY685325 vs. ExPASy Swiss-Prot
Match: BETB_ERWCT (Betaine aldehyde dehydrogenase OS=Erwinia carotovora subsp. atroseptica GN=betB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.448e-20
Identity = 53/103 (51.46%), Postives = 67/103 (65.05%), Query Frame = 1
Query:   52 ASGYFVGPTVFANVTEDMTIAREEIFGPVLSIMGYKDEADAVRIANGTEYGLAGGVWSGDPDRADRVARQLRAGQVEVN-GGAFNTNAPFGGYKHSG-GRARG 354
            A G +V PTVF +  +DM I R+EIFGPV+SI+ Y+DE + +R AN +EYGLA G+ + D +RA RV  QL AG   +N  G      P GGYKHSG GR  G
Sbjct:  364 AQGAYVAPTVFTDCRDDMKIVRKEIFGPVMSILTYQDEDEVIRRANDSEYGLAAGIVTRDLNRAHRVIHQLEAGICWINTWGESPAEMPVGGYKHSGVGRENG 466          
The following BLAST results are available for this feature:
BLAST of EY685325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
BETB_ECO272.216e-2051.96Betaine aldehyde dehydrogenase OS=Escherichia coli... [more]
PUUC_ECOLI2.894e-2045.61Gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen... [more]
BETB_PSEF52.894e-2048.28Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
BETB_PSEPK3.780e-2051.46Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEP13.780e-2051.46Betaine aldehyde dehydrogenase OS=Pseudomonas puti... [more]
BETB_PSEFS3.780e-2048.28Betaine aldehyde dehydrogenase OS=Pseudomonas fluo... [more]
ALDH_ALTAL4.937e-2052.83Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
AL1A7_MOUSE4.937e-2053.40Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
BETB_SHIF86.448e-2049.52Betaine aldehyde dehydrogenase OS=Shigella flexner... [more]
BETB_ERWCT6.448e-2051.46Betaine aldehyde dehydrogenase OS=Erwinia carotovo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-F05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685325 ID=EY685325; Name=EY685325; organism=Citrus sinensis; type=EST; length=1047bp
ACACTGCAGTACGGTCCGGATTCCCGGGTCGACGGTCGCGAAACCGGACT
GGCCAGTGGATATTTCGTCGGACCGACGGTGTTCGCGAACGTGACCGAAG
ACATGACCATTGCGCGCGAGGAGATCTTCGGACCGGTCCTCTCGATCATG
GGTTACAAAGACGAGGCCGACGCAGTGCGGATCGCCAACGGCACCGAGTA
CGGACTGGCCGGTGGCGTTTGGTCAGGTGACCCCGATCGCGCGGATCGCG
TCGCCCGGCAACTGCGGGCCGGGCAGGTCGAGGTGAACGGCGGAGCATTC
AACACGAATGCTCCGTTCGGTGGGTACAAACACTCGGGGGGGCGGGCGCG
AGGCCCGCACGCTGGGGGCGAGACATTACTCGATGATCACGGCGATTCCC
AAGCTCCCTCTACCCAATGTTCACCCAGCGGAGGGGGGGGGGGGGGGGGG
GGGGGGGGAACGGAACCACGGCGGCGGACAGGAGACAGGTCAAGGAAGCA
TAACGCCCTGATCATCGCGGGGGGGAGCTAAGTGACGGGGGGGCGAGGGG
GCGCCGGAGGGCGGCCCCGTGAGCCCCCACGCTGGCGGGGGGGGCGAGGG
GGCGGGGCCAGATAGGACCAGCAGGGGCGCACGACACGCGAGGCGGATGT
TGGATGGAAGGTCAGAACGCACTCCCACCAAGGGAACGCGGGCCGGCGGT
GAGAAAACGTGGCTCCTCGGAGCCCAAGGCAGTCCGCGCCGCGCACGTGC
GGGGATCGGATCTCCGAGCCGCGTCACGGGGCGGCGGGCCCAGCGCTGGG
GGCGCGGTGGCCGACGGCATGCGCGGCGCCCGCCTCGCTAAAGGAGTGCG
CCTACGCCTCGTCGGCGTGAAACGCTAACTAACGCTAAACCGCAGCAGAA
AGAAACAGCCACCATGCAATACTGAGCGAGGCGAGGAGACACAACAAACG
ACCACAGCACTAGAACGCGACTACGCCTCACGAACAATACGACTGCCGCG
GAGAACGCACGGCGTGAGAAACGGCACAACCGAGGCAAAGGAAATGA
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