EY685320

Overview
NameEY685320
Unique NameEY685320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685320_ssr617 microsatellite EY685320_ssr617:617..628. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8839 contig Csv1_Contig8839:1..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 1.211e-91
Identity = 170/196 (86.73%), Postives = 178/196 (90.82%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 598
            +QVFTTYQDQQTTV+IQVFEGERSLTKDCRLLGKFDL+GI PAPRGTPQIEVTFEVDANGILNVKAEDK +GKSEKITITNDKGRLSQ            FAEEDKKVKEKIDARNSLETY+YNMKNQI+D DKLADKLESDEK+KIE AVKEALEWLDDNQSAEKEDY+EKLKEVEAVCNPIITAVYQRSGG  G
Sbjct:  457 SQVFTTYQDQQTTVTIQVFEGERSLTKDCRLLGKFDLTGIAPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGPSG 652          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 5.651e-73
Identity = 139/158 (87.97%), Postives = 142/158 (89.87%), Query Frame = 2
Query:  134 PAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 607
            PAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQ            FAEEDKKVKE+IDARN LETYVYNMKNQINDKDKLADKLESDEK+KIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGA G  +
Sbjct:    1 PAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASGGSS 158          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP7C_DROME (Heat shock 70 kDa protein cognate 3 OS=Drosophila melanogaster GN=Hsc70-3 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.181e-62
Identity = 112/195 (57.44%), Postives = 150/195 (76.92%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 595
            +QVF+T  D Q TV+IQV+EGER +TKD  LLGKFDL+GIPPAPRG PQIEV+FE+DANGIL V AEDKGTG  EKI ITND+ RL+             FA+EDKK+KE++++RN LE+Y Y++KNQI DKDKL  KL  DEK+K+E+A+ E+++WL+ N  A+ E+Y+++ K++EA+  P+I  +YQ +GGAP
Sbjct:  448 SQVFSTASDNQHTVTIQVYEGERPMTKDNHLLGKFDLTGIPPAPRGIPQIEVSFEIDANGILQVSAEDKGTGNKEKIVITNDQNRLTPEDIDRMIRDAEKFADEDKKLKERVESRNELESYAYSLKNQIGDKDKLGAKLSDDEKNKLESAIDESIKWLEQNPDADPEEYKKQKKDLEAIVQPVIAKLYQGAGGAP 642          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.543e-62
Identity = 117/201 (58.21%), Postives = 150/201 (74.63%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP-GAGTE 610
            +QVF+TYQD Q  VSIQ++EGERS+TKD  LLGKFDLSGIPPA RG PQIEVTFE+D NGIL+V AEDK +G  E ITITNDK RLSQ             A+EDK  KE+++A+N+LE Y+Y +KN I DKDK+  K+ESD+K+ IETA+ +AL WLD N SAEKE+++E+ K +E +  PI + +Y  +GG+P GAG +
Sbjct:  451 SQVFSTYQDNQDRVSIQIYEGERSMTKDNNLLGKFDLSGIPPAQRGVPQIEVTFEMDVNGILHVSAEDKASGSKESITITNDKERLSQADIDRMVKEAADAADEDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLYGAAGGSPNGAGED 651          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: GRP78_APLCA (78 kDa glucose-regulated protein OS=Aplysia californica PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.228e-61
Identity = 113/195 (57.95%), Postives = 144/195 (73.85%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAP 595
            +Q+F+T  D Q TV+IQV+EGERS+TKD  LLGKFDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   +I I ND+ RLS             +A+EDKKVKEK+DA+N LE+Y Y++KNQI DK+KL  KL  ++K+KI  AV EA++WL+ N  AE E + EK  E+E +  PI+T +Y++SGGAP
Sbjct:  457 SQIFSTAADNQPTVTIQVYEGERSMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILKVTAEDKGTGSKNQIVIQNDQNRLSPEDIERMINDAEKYADEDKKVKEKVDAKNELESYAYSLKNQIGDKEKLGAKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLYEQSGGAP 651          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.444e-60
Identity = 113/193 (58.55%), Postives = 149/193 (77.20%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 589
            +Q F+TYQD Q  V IQVFEGER+LTKD  LLGKF+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+            FA+EDK ++EK++A+N+L+ Y+ +MK  + DKDKLADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:   71 SQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 263          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: GRP78_CHICK (78 kDa glucose-regulated protein OS=Gallus gallus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.444e-60
Identity = 116/200 (58.00%), Postives = 146/200 (73.00%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 610
            +Q+F+T  D Q TV+I+V+EGER LTKD  LLG FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+             FAEEDKK+KE+IDARN LE+Y Y++KNQI DK+KL  KL S++K+ IE AV+E +EWL+ +Q A+ ED++ K KE+E V  PI++ +Y  S G P  G E
Sbjct:  446 SQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKSKKKELEEVVQPIVSKLY-GSAGPPPTGEE 644          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.886e-60
Identity = 112/197 (56.85%), Postives = 146/197 (74.11%), Query Frame = 2
Query:    8 SAQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 598
            +++ FTTY D Q  V IQV+EGER+LTKD  LLGKF+LSGIPPAPRG PQIEVTF++DANGILNV A+DK TGK  KITITNDKGRLS+            +  +D+  K++I A+N+LE+Y +NMK  I D +KL DK+  ++K KI+    E + WLD NQ+AEK+++E + KE+E+VCNPIIT +YQ +GG PG
Sbjct:  423 TSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIED-EKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPG 618          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.886e-60
Identity = 113/193 (58.55%), Postives = 148/193 (76.68%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGG 589
            +Q F+TYQD Q  V IQVFEGER+LTKD  LLGKF+LSGIPPA RG P+IEVTF VD NGIL+V+AEDKGTGKS  ITITNDKGRLS+            FA+EDK ++EK++A+N L+ Y+ +MK  + DKDKLADK+E ++K+ I +AVK+A +WL++N +A+ E  ++KLK++EAVC PII  +Y + GG
Sbjct:  447 SQTFSTYQDNQPAVLIQVFEGERALTKDNHLLGKFELSGIPPAQRGVPKIEVTFTVDKNGILHVEAEDKGTGKSRGITITNDKGRLSKEQIEKMINDAEKFADEDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLYGQPGG 639          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.463e-60
Identity = 113/200 (56.50%), Postives = 144/200 (72.00%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGTE 610
            +Q+F+T  D Q TV+I+V+EGER LTKD  LLG FDL+GIPPAPRG PQIEVTFE+D NGIL V AEDKGTG   KITITND+ RL+             FAEEDKK+KE+ID RN LE+Y Y++KNQI DK+KL  KL S++K+ IE AV+E +EWL+ +Q A+ ED++ K KE+E +  PI+  +Y  +G  P  G E
Sbjct:  449 SQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKITITNDQNRLTPEEIERMVTDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIGDKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIVGKLYGGAGAPPPEGAE 648          
The following BLAST results are available for this feature:
BLAST of EY685320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BIP_SPIOL1.211e-9186.73Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP3_TOBAC5.651e-7387.97Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP7C_DROME1.181e-6257.44Heat shock 70 kDa protein cognate 3 OS=Drosophila ... [more]
BIP2_DICDI1.543e-6258.21Luminal-binding protein 2 OS=Dictyostelium discoid... [more]
GRP78_APLCA2.228e-6157.9578 kDa glucose-regulated protein OS=Aplysia califo... [more]
GRP78_PLAFA1.444e-6058.5578 kDa glucose-regulated protein homolog (Fragment... [more]
GRP78_CHICK1.444e-6058.0078 kDa glucose-regulated protein OS=Gallus gallus ... [more]
HSP70_BRUMA1.886e-6056.85Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
GRP78_PLAFO1.886e-6058.5578 kDa glucose-regulated protein homolog OS=Plasmo... [more]
GRP78_XENLA2.463e-6056.5078 kDa glucose-regulated protein OS=Xenopus laevis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-E06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685320 ID=EY685320; Name=EY685320; organism=Citrus sinensis; type=EST; length=947bp
CCACGCGTCCGCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTACAG
TTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCAGA
TTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGAAC
CCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAATG
TAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCACA
AATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGTGA
GGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCGATG
CTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATTAAT
GACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAAGAT
TGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGAGCG
CAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTTTGC
AACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGGTGC
TGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAAGAA
ATTTTTACTTTCGATTGACCATATTGCCAAAACTGGTCAAGAGGCTAAAA
TTGAGTAAAATAGGCTTTTTAGATTATCTGAGGGAACTTACTGGTATTTT
TTCTCGTGGTAAGAGAAATAAAAGGGAGGGGGAATTTCCCTTTCTTCCCG
GGTTTTTTGGGATGGGAAAAACCTTTAAGGGATTTTTTCTTATTTTCTTT
ACTAGGGGTTTCCTTCAAAATTAATTGAACGTTTCTTCCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG
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