EY685320

Overview
NameEY685320
Unique NameEY685320
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length947
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685320_ssr617 microsatellite EY685320_ssr617:617..628. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig8839 contig Csv1_Contig8839:1..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.494e-57
Identity = 109/198 (55.05%), Postives = 142/198 (71.72%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAGT 607
            Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+  ++++ A+N+LE+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G+
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGGS 622          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP70_SCHMA (Heat shock 70 kDa protein homolog OS=Schistosoma mansoni PE=2 SV=2)

HSP 1 Score: 223.402 bits (568), Expect = 1.494e-57
Identity = 113/195 (57.95%), Postives = 142/195 (72.82%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 598
            Q FTTY D Q  V IQVFEGER+LTKD  LLGKF+LSGIPPAPRGTPQIEVTF++DANGILNV A DKGTGK  KITITNDKGRLS+            +  ED+K ++++ A+NSLE+YVY MK Q+  + +L +K+   ++  I +  ++ + WLD +QSAEK +YE K +E+E VC PIIT VYQ +GG PG
Sbjct:  424 QTFTTYSDNQPGVLIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEEIERMVADADKYKAEDEKQRDRVSAKNSLESYVYTMKQQV--EGELKEKIPESDRQVIISKCEDTISWLDVHQSAEKHEYESKREELEKVCAPIITKVYQ-AGGMPG 615          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.951e-57
Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGA 592
            +Q+F+TY D Q  V IQVFEGER++TKDC LLG F+LSGIPP PRG PQIEVTF++DANGILNV AE+KGTGK  +I +TNDKGRLS+            +  EDK    +IDA+N LE Y ++MKN +ND + +A K+E  +K  I +AV+EALEWL++NQ A KE+YE + KE+E +C PI+T +YQ   GA
Sbjct:  428 SQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKNAVNDPN-VAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQGMAGA 620          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.329e-57
Identity = 108/195 (55.38%), Postives = 139/195 (71.28%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 598
            Q FTTY D Q  V IQV+EGER++TKD  LLGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+K ++K+ ++NSL++Y +NMK  + D +KL  K+  ++   I     E + WLD NQ+AEKE++E + KE+E VCNPIIT +YQ +GG PG
Sbjct:  426 QTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVED-EKLPGKILDEDHQNILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.329e-57
Identity = 111/197 (56.35%), Postives = 144/197 (73.10%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 604
            QVF+TY D Q  V IQVFEGERS TKD  +LGKF+L+GIPPAPRG PQIEVTF++DANGILNV A DK TGKS KITITNDKGRLS+            +  ED+K+ +K++A+NSLE Y YN++N + D +KL +K++ ++K  IE  VKE LE+++ N+  EKE+YEEK KE++   NPII+ +YQ+ G  P  G
Sbjct:  432 QVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSASDKSTGKSNKITITNDKGRLSKEEIERMVEEAEKYKTEDEKLDKKLEAKNSLENYAYNIRNTVRD-EKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQQ-GSVPDMG 626          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.329e-57
Identity = 112/196 (57.14%), Postives = 137/196 (69.90%), Query Frame = 2
Query:   11 AQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPG 598
            +QVFTTY D Q  V IQVFEGERS+T    LLGKF+LSGIP APRG PQIEVTF+VDANGILNV A DK TGK  KITITNDKGRLS+            +  +D+  ++K+ A+NSLE+Y YNMK  + D +K+  K+  ++K  I     E +EW+D NQ+AEK+ YE K KE+E VCNPIIT +YQ  GG PG
Sbjct:  432 SQVFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELSGIPLAPRGVPQIEVTFDVDANGILNVSALDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKADDELQRDKVQAKNSLESYCYNMKQTVED-EKVKGKISEEDKKTIIKKCNETVEWVDKNQTAEKDQYEHKQKELEKVCNPIITKLYQAGGGMPG 626          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 4.347e-57
Identity = 108/197 (54.82%), Postives = 141/197 (71.57%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 604
            Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+  ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.347e-57
Identity = 108/197 (54.82%), Postives = 141/197 (71.57%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 604
            Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+  ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVED-EKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 4.347e-57
Identity = 108/197 (54.82%), Postives = 141/197 (71.57%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 604
            Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+  ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVED-EKLRGKISDQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
BLAST of EY685320 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 4.347e-57
Identity = 108/197 (54.82%), Postives = 141/197 (71.57%), Query Frame = 2
Query:   14 QVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLSGIPPAPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQXXXXXXXXXXXXFAEEDKKVKEKIDARNSLETYVYNMKNQINDKDKLADKLESDEKDKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGAPGAG 604
            Q FTTY D Q++V +QV+EGER++TKD  LLGKFDL+GIPPAPRG PQIEVTF++DANGILNV A DK TGK  KITITNDKGRLS+            +  ED+  ++++ A+N++E+Y YN+K  + D +KL  K+   +K+KI    +E + WLD NQ AEK++YE K KE+E VCNPII+ +YQ   G PG G
Sbjct:  429 QTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVED-EKLRGKISDQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ---GGPGGG 621          
The following BLAST results are available for this feature:
BLAST of EY685320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_HUMAN1.494e-5755.05Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_SCHMA1.494e-5757.95Heat shock 70 kDa protein homolog OS=Schistosoma m... [more]
HSP70_TRYCR1.951e-5756.19Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP7C_CHICK3.329e-5755.38Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HSP70_PYRSA3.329e-5756.35Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_HYDMA3.329e-5757.14Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP72_RAT4.347e-5754.82Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE4.347e-5754.82Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_CAPHI4.347e-5754.82Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN4.347e-5754.82Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-E06-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685320 ID=EY685320; Name=EY685320; organism=Citrus sinensis; type=EST; length=947bp
CCACGCGTCCGCTCAAGTTTTCACCACTTATCAAGACCAGCAGACTACAG
TTTCCATTCAGGTTTTTGAAGGTGAAAGGAGTCTCACAAAGGATTGCAGA
TTGCTTGGGAAATTCGATCTTTCTGGAATTCCTCCAGCTCCTAGGGGAAC
CCCTCAAATTGAAGTCACATTTGAAGTTGATGCAAATGGTATCTTAAATG
TAAAGGCAGAAGACAAGGGCACAGGCAAATCAGAGAAAATTACCATCACA
AATGACAAGGGTCGCCTGAGCCAGGAGGAGATTGAGCGTATGGTTCGTGA
GGCTGAAGAATTTGCCGAGGAGGACAAGAAAGTAAAGGAGAAGATCGATG
CTCGCAACAGCCTTGAGACCTATGTCTATAACATGAAAAACCAGATTAAT
GACAAGGACAAGCTTGCCGACAAGCTCGAATCTGATGAGAAGGACAAGAT
TGAAACTGCTGTAAAGGAAGCCCTTGAATGGCTCGATGACAACCAGAGCG
CAGAGAAAGAGGACTATGAAGAGAAGCTCAAGGAGGTTGAAGCCGTTTGC
AACCCCATCATCACTGCTGTATATCAGAGATCTGGCGGAGCCCCCGGTGC
TGGCACTGAATCATCGGATGATGATGATTCACACGATGAGCTCTAAAGAA
ATTTTTACTTTCGATTGACCATATTGCCAAAACTGGTCAAGAGGCTAAAA
TTGAGTAAAATAGGCTTTTTAGATTATCTGAGGGAACTTACTGGTATTTT
TTCTCGTGGTAAGAGAAATAAAAGGGAGGGGGAATTTCCCTTTCTTCCCG
GGTTTTTTGGGATGGGAAAAACCTTTAAGGGATTTTTTCTTATTTTCTTT
ACTAGGGGTTTCCTTCAAAATTAATTGAACGTTTCTTCCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGG
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