EY685303

Overview
NameEY685303
Unique NameEY685303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_TOBAC (Translationally-controlled tumor protein homolog OS=Nicotiana tabacum GN=TCTP PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.935e-41
Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLL+GDEL SDSF Y E  NG+LWEV+GKWVVQGAVDV+IGANPS               KVVDIVDTFRLQEQP+FDKKQFV YMK++IK LTPKL  E++E+FK  ++GAT  LLS+
Sbjct:    1 MLVYQDLLSGDELPSDSFSYTELGNGVLWEVQGKWVVQGAVDVNIGANPSAEGADEDEGVDDQAIKVVDIVDTFRLQEQPSFDKKQFVAYMKKYIKNLTPKLGAEQEEVFKNNIQGATKYLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_MEDSA (Translationally-controlled tumor protein homolog OS=Medicago sativa GN=TCTP PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 1.012e-40
Identity = 84/122 (68.85%), Postives = 96/122 (78.69%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLL 422
            MLVYQDLLTGDELLSDS+PYKE ENG+LWEVEGKWV +G V+VDIGAN S               KVVDIVD FRLQEQPAFDKKQF+ ++KR+IKLLTPKL  E+QE+FK+ +EGAT  LL
Sbjct:    1 MLVYQDLLTGDELLSDSYPYKEIENGMLWEVEGKWVTKGVVEVDIGANAS-AEGGEDEGVDDTAVKVVDIVDVFRLQEQPAFDKKQFLGFVKRYIKLLTPKLDAEKQELFKKHIEGATKYLL 121          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_HORVU (Translationally-controlled tumor protein homolog OS=Hordeum vulgare GN=TCTP PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 1.012e-40
Identity = 84/124 (67.74%), Postives = 94/124 (75.81%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQD L+GDELLSDSFPY+E ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF+ Y+KR+IK LT KL  E  + FK+ VE AT  LLS+
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKYLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_BRAOL (Translationally-controlled tumor protein homolog OS=Brassica oleracea GN=TCTP PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.322e-40
Identity = 82/122 (67.21%), Postives = 94/122 (77.05%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLL 422
            MLVY DLLTGDELLSDSFPYKE ENGILWEVEGKW  +G V+V+IGANPS               KVVDIVDTFRLQEQP +DKK F+ Y+K++IKLLTPKL+ E+QE FK+ +EGAT  LL
Sbjct:    1 MLVYTDLLTGDELLSDSFPYKEIENGILWEVEGKWTTKGCVEVNIGANPSAEEGGEDEGVDDSVEKVVDIVDTFRLQEQPTYDKKGFIAYIKKYIKLLTPKLTPEQQEEFKKGIEGATKFLL 122          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_PSEMZ (Translationally-controlled tumor protein homolog OS=Pseudotsuga menziesii GN=TCTP PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 2.255e-40
Identity = 86/124 (69.35%), Postives = 96/124 (77.42%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            M+VYQDLL+GDELLSDSFPYKE  NG+LWEVEGKWVVQGAVDVDIGANPS               KVVDIVDTFRLQEQP FDKKQF+ ++KR+IK L  KLSEERQ  FK+ VEGA   L+S+
Sbjct:    1 MIVYQDLLSGDELLSDSFPYKELYNGVLWEVEGKWVVQGAVDVDIGANPS-AEGGDEEGVKIRLVKVVDIVDTFRLQEQPPFDKKQFLGFIKRYIKNLATKLSEERQAEFKKNVEGAAKMLVSK 123          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_WHEAT (Translationally-controlled tumor protein homolog OS=Triticum aestivum GN=TCTP PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.847e-40
Identity = 82/124 (66.13%), Postives = 96/124 (77.42%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQD L+GDELLSDSFPY+E ENG+LWEV+G WVVQGAVDVDIGANPS               KVVDIVDTFRLQEQPAFDKKQF+++MKR+IK L+ KL  +  ++FK+ VE AT  LLS+
Sbjct:    1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGVDDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKYLLSK 124          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_CUCME (Translationally-controlled tumor protein homolog OS=Cucumis melo GN=TCTP PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 4.253e-39
Identity = 80/122 (65.57%), Postives = 94/122 (77.05%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLL 422
            MLVYQDL++GDELLSDSFPYKE ENG++WEVEGKWVV+GAVDVDIGANPS               KVVDIVDTFRLQEQP+ DKK F++ +K++IK LTP L  E+QE FK ++EGA   LL
Sbjct:    1 MLVYQDLVSGDELLSDSFPYKEIENGMIWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGVDDQAVKVVDIVDTFRLQEQPSMDKKVFLSCIKKYIKKLTPLLQGEQQEAFKNKIEGAVKYLL 122          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_MAIZE (Translationally-controlled tumor protein homolog OS=Zea mays GN=TCTP PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.600e-38
Identity = 83/124 (66.94%), Postives = 93/124 (75.00%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQEIFKRRVEGATNSLLSQ 428
            MLVYQDLL+GDELLSDSF YKE ENG+LWEVEGKWV QG VDVDIGANPS               KVVDIVDTFRLQEQP FDKK FV+Y+K++IK LT  L  E+ + FK+ VEGAT  LLS+
Sbjct:    1 MLVYQDLLSGDELLSDSFTYKELENGVLWEVEGKWVTQGPVDVDIGANPS-AEGGEDESVDDTAVKVVDIVDTFRLQEQPPFDKKSFVSYIKKYIKNLTAVLEPEKADEFKKGVEGATKFLLSK 123          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_GIBZE (Translationally-controlled tumor protein homolog OS=Gibberella zeae GN=FG02523 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.378e-13
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSE 368
            ML+Y D+L GDEL+SDS+  KE + GI++E +   + +GAV+V+IGAN S               KV +IV++FRLQ    FDKK ++ Y+K ++K +  KL E
Sbjct:    1 MLIYNDILNGDELISDSYDLKEVD-GIVYEADCAMIEEGAVEVNIGANAS--AEEAAEDLDDGAVKVNNIVNSFRLQ-STTFDKKSYLAYLKGYMKAIKAKLQE 100          
BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_CRYNE (Translationally-controlled tumor protein homolog OS=Cryptococcus neoformans GN=CNM01460 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.069e-13
Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 3
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDIGANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQE 380
            ML+YQD+LTGDE++SD+FP KE    I +EV+   ++    DVDIG NPS               +V ++V +FRLQ   +FDKK ++TY+K ++K +  KL E   +
Sbjct:    1 MLIYQDVLTGDEMISDAFPIKEI-GDIAYEVDCANIIIKEGDVDIGGNPS--AEEAAEALEEGAQQVNNVVHSFRLQ-STSFDKKSYLTYLKGYMKAIKSKLQESNPD 104          
The following BLAST results are available for this feature:
BLAST of EY685303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
TCTP_TOBAC5.935e-4166.94Translationally-controlled tumor protein homolog O... [more]
TCTP_MEDSA1.012e-4068.85Translationally-controlled tumor protein homolog O... [more]
TCTP_HORVU1.012e-4067.74Translationally-controlled tumor protein homolog O... [more]
TCTP_BRAOL1.322e-4067.21Translationally-controlled tumor protein homolog O... [more]
TCTP_PSEMZ2.255e-4069.35Translationally-controlled tumor protein homolog O... [more]
TCTP_WHEAT3.847e-4066.13Translationally-controlled tumor protein homolog O... [more]
TCTP_CUCME4.253e-3965.57Translationally-controlled tumor protein homolog O... [more]
TCTP_MAIZE3.600e-3866.94Translationally-controlled tumor protein homolog O... [more]
TCTP_GIBZE1.378e-1342.31Translationally-controlled tumor protein homolog O... [more]
TCTP_CRYNE3.069e-1340.74Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-C07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685303 ID=EY685303; Name=EY685303; organism=Citrus sinensis; type=EST; length=972bp
CCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACT
GCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTC
CGACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTG
AGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAAT
CCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGT
GAAGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTT
TTGACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTG
ACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAGGAGGGTGGA
GGGAGCCACCAACTCCTTGCTCTCGCAGGCTCCGGGGGCCCTCATTCTCT
GTTGGGGCAAACTTGTCATGATGCAGGTTGACCTGCCCTTACTTACTCCA
AGGCATCCACCCCCGACCCCCCACTCTACACTATCGATACATACCTCGTC
AGGGCCCGCACCGCCACCCATCCTACTACAAATCGCAAACAACGCTGATC
CTCAGGGGCGCCAATAGGAACCGAGGACAATCCCCCCGAACCCCGTACGG
ACAGCACCCTTATATCCCGTATCGACACCGCCTGTCTGACAGATTTCGAG
GCGCGAGCCAGAAAGCTAGCCAGTCGACGCCACAGCGACACGCTACGGGC
AGCGAGACATACATCACGCCCGTCCTGCTGGCTTATAACCTCTATACTCG
GCGTCGTCCGCGCCCCCCTCCCCATCACCCAGCTCGCCTCCCGCCTGCCC
ACTGCGTCGCGCCCCGCATAAGCGGCTACACTACGGCAGACCAGACCTCA
ATGTATGCAGCGACAGCTGCCCAACATGGAAGTGACCAACCCCCAGCCTC
CACTCACCCTTTTCTACACCTG
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