EY685303

Overview
NameEY685303
Unique NameEY685303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685303 vs. ExPASy Swiss-Prot
Match: TCTP_AEDAL (Translationally-controlled tumor protein homolog OS=Aedes albopictus GN=Tctp PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.358e-11
Identity = 50/150 (33.33%), Postives = 74/150 (49.33%), Query Frame = 3 
Query:   57 MLVYQDLLTGDELLSDSFPYKETENGILWEVEGKWVVQGAVDVDI-GANPSXXXXXXXXXXXXXXXKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLSEERQ---EIFKRRVEGATNSLLSQ------APGALILCWGKLVMMQ 476
            M +++D+ TGDE+ SD++  K  +N +++EV GK V +   DV + GANPS                 VDIV   RL E    DKKQF TY+K ++K L  +L E      E+FK  +      LL +        G  + C G + M++
Sbjct:    1 MKIWKDIFTGDEMFSDTYKVKLIDN-VMYEVYGKHVSRTLGDVQLDGANPSAEEADEGTDAATESG--VDIVLNHRLVETGFADKKQFTTYLKDYMKKLVTRLEENNPSEVEVFKTNINKVMKDLLGRFKDLQFFTGESMDCEGLIAMLE 147
The following BLAST results are available for this feature:
BLAST of EY685303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
TCTP_AEDAL8.358e-1133.33Translationally-controlled tumor protein homolog O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-013-C07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685303 ID=EY685303; Name=EY685303; organism=Citrus sinensis; type=EST; length=972bp
CCAGTTTTCTCCGTTGATTATTTTTCTTTTTTGTGTTCGCGAGAGAGACT
GCAATCATGTTGGTCTATCAAGATCTCCTCACCGGTGATGAGCTTCTCTC
CGACTCTTTTCCCTACAAGGAAACTGAGAATGGGATTCTGTGGGAAGTTG
AGGGAAAGTGGGTTGTACAAGGAGCCGTTGATGTTGACATTGGTGCAAAT
CCTTCTGCCGAAGGAGCTGATGAGGATGAGGGTGTTGATGACCAAGCCGT
GAAGGTGGTCGACATTGTCGACACATTCAGGCTGCAGGAGCAACCTGCTT
TTGACAAGAAGCAGTTTGTAACATACATGAAGAGATTCATCAAGTTGCTG
ACGCCCAAGCTGAGTGAGGAGAGGCAGGAGATATTTAAGAGGAGGGTGGA
GGGAGCCACCAACTCCTTGCTCTCGCAGGCTCCGGGGGCCCTCATTCTCT
GTTGGGGCAAACTTGTCATGATGCAGGTTGACCTGCCCTTACTTACTCCA
AGGCATCCACCCCCGACCCCCCACTCTACACTATCGATACATACCTCGTC
AGGGCCCGCACCGCCACCCATCCTACTACAAATCGCAAACAACGCTGATC
CTCAGGGGCGCCAATAGGAACCGAGGACAATCCCCCCGAACCCCGTACGG
ACAGCACCCTTATATCCCGTATCGACACCGCCTGTCTGACAGATTTCGAG
GCGCGAGCCAGAAAGCTAGCCAGTCGACGCCACAGCGACACGCTACGGGC
AGCGAGACATACATCACGCCCGTCCTGCTGGCTTATAACCTCTATACTCG
GCGTCGTCCGCGCCCCCCTCCCCATCACCCAGCTCGCCTCCCGCCTGCCC
ACTGCGTCGCGCCCCGCATAAGCGGCTACACTACGGCAGACCAGACCTCA
ATGTATGCAGCGACAGCTGCCCAACATGGAAGTGACCAACCCCCAGCCTC
CACTCACCCTTTTCTACACCTG
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