EY685269
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 1.669e-11 Identity = 31/78 (39.74%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 94 VAFDISLAGKMEDLDASSPNCNDPHVARTHYQESVLSDDGFVIFLNDNARTGAHWRIPTSETMLLSLSDSVSAAE*LI 327 VA DI K+ED+ SS NC+ PHV RT YQ +S+DGFV L + T R+PT ET++ + + + + L+ Sbjct: 62 VAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLV 139 HSP 2 Score: 28.1054 bits (61), Expect = 1.669e-11 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 23 RPCKVVEISTSKYWK 67 RPCKVVE+STSK K Sbjct: 39 RPCKVVEVSTSKTGK 53
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 1.669e-11 Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 1 Query: 94 VAFDISLAGKMEDLDASSPNCNDPHVARTHYQESVLSDDGFVIFLNDNARTGAHWRIPTSETMLLSLSDSVSAAE*LI 327 VA DI K+ED+ SS NC+ PHV RT YQ +S+DGFV L ++ T R+PT E++L + D + L+ Sbjct: 61 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLV 138 HSP 2 Score: 28.1054 bits (61), Expect = 1.669e-11 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 23 RPCKVVEISTSKYWK 67 RPCKVVE+STSK K Sbjct: 38 RPCKVVEVSTSKTGK 52
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 2.167e-11 Identity = 32/78 (41.03%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 94 VAFDISLAGKMEDLDASSPNCNDPHVARTHYQESVLSDDGFVIFLNDNARTGAHWRIPTSETMLLSLSDSVSAAE*LI 327 VA DI K+ED+ SS NC+ PHV RT YQ +S+DGFV L ++ T R+PT E +L + D + L+ Sbjct: 61 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLV 138 HSP 2 Score: 28.1054 bits (61), Expect = 2.167e-11 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 23 RPCKVVEISTSKYWK 67 RPCKVVE+STSK K Sbjct: 38 RPCKVVEVSTSKTGK 52
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.169e-11 Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 1 Query: 94 VAFDISLAGKMEDLDASSPNCNDPHVARTHYQESVLSDDGFVIFLNDNARTGAHWRIPTSETMLLSLSDSVSAAE*LI 327 VA DI + K+ED+ SS NC+ PHV RT YQ +S+DG+V L DN T ++P +T+L + + L+ Sbjct: 60 VAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLV 137 HSP 2 Score: 28.1054 bits (61), Expect = 6.169e-11 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 23 RPCKVVEISTSKYWK 67 RPCKVVE+STSK K Sbjct: 37 RPCKVVEVSTSKTGK 51
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 7.334e-11 Identity = 33/70 (47.14%), Postives = 48/70 (68.57%), Query Frame = 1 Query: 337 TLTGKTITLYVDSSNSIDNVKAKIRDYEGIPPDHQRLIFTGKQLEDGRTLADYNIQKESTLHLVLLLRGG 546 TLTGK I++ + S+ + ++K + + EGIPP QRLIF GKQ++D T+ D ++ + LHLVL LRGG Sbjct: 7 TLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
BLAST of EY685269 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLTU (Eukaryotic translation initiation factor 5A-1/2 OS=Solanum tuberosum GN=EIF5A1 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 7.997e-11 Identity = 30/64 (46.88%), Postives = 39/64 (60.94%), Query Frame = 1 Query: 94 VAFDISLAGKMEDLDASSPNCNDPHVARTHYQESVLSDDGFVIFLNDNARTGAHWRIPTSETML 285 VA DI K+ED+ SS NC+ PHV RT YQ +S+DGFV L +N T R+PT + +L Sbjct: 61 VAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDDALL 124 HSP 2 Score: 28.1054 bits (61), Expect = 7.997e-11 Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 23 RPCKVVEISTSKYWK 67 RPCKVVE+STSK K Sbjct: 38 RPCKVVEVSTSKTGK 52 The following BLAST results are available for this feature:
BLAST of EY685269 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 106
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685269 ID=EY685269; Name=EY685269; organism=Citrus sinensis; type=EST; length=889bpback to top |