EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.015e-35
Identity = 81/193 (41.97%), Postives = 111/193 (57.51%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFY----EIAKRLPRVQPAPNPSGMVLMDRPG----GKDSEC 669
            KL+L+GD G GKS L+LRF    + E   STIG  F  +T+ ++   +K +IWDTAGQER+ ++   YYRGA   I+VYD+T+Q SF   K+W+ E+    + N+   L GNK+DL   + V  + A+A+A E G+ F+ETSAK ATNV   F     EI  R+      P P G V+    G     K S C
Sbjct:   10 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVPPKPGGPVVRPTEGKPINNKSSSC 202          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.015e-35
Identity = 81/191 (42.41%), Postives = 114/191 (59.69%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIA---KRLPRVQPA---PNPSGMVLMDRPGGKDSEC 669
            KL+L+GD G GKS L+LRF    +++   STIG  F  +T+  +  T+K +IWDTAGQER+ ++   YYRGA   IIVYD+T+Q SF   K+W+ E+    + N+   L GNK+DL   + V  E A+A+A E G+ FMETSAK ATNV   F  +A   K     QPA     P+ + +  +P  + + C
Sbjct:   10 KLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQIRGQPVNQKTSC 200          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.015e-35
Identity = 79/193 (40.93%), Postives = 117/193 (60.62%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK----RLPRVQPAPNPSGMVLMD----RPGGKDSEC 669
            K++L+GD G GKS L+LRF    + +   STIG  F  +TL ++  T+K +IWDTAGQER+ ++   YYRGA   I+VYD T+Q SF   K+W+ E+      N+   L GNK DL++ + V + +A+++A+  G+ F+ETSAK ATNV + F  +A+    RL  +Q  P P  + +      + GGK S C
Sbjct:   12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLADIQETPKPDEVDIKSKNKTKSGGKKSFC 204          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 3.436e-35
Identity = 71/162 (43.83%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 600
            K +++GD G GKS L+L+F   +F    + TIG  F ++ + ++   +K +IWDTAGQE + S+   YYRGAA A++VYDIT + +F     W+++ +   + NMV+ L GNK+DL   R V  EE +A+A+E+GL FMETSAKTA NV + +   AK + R
Sbjct:    8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYR 169          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RABJ_DICDI (Ras-related protein RabJ OS=Dictyostelium discoideum GN=rabJ PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.488e-35
Identity = 75/164 (45.73%), Postives = 109/164 (66.46%), Query Frame = 1
Query:  103 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            ++ +K+VLLG    GK++L LR+V G F +   STIGA+F ++T+ +    +K+ IWD+AGQ+R+ SLA +YYRGA  AI+V+DIT Q +F+  K WV+EL+A     ++M L GNK DL   R+V +E A+ YA E    ++ETSAK    V  +F EI K+L
Sbjct:    7 SMESKVVLLGSSDVGKTALSLRYVDGIFPKRLTSTIGASFLTRTINIEGNKIKYLIWDSAGQDRFRSLATLYYRGACVAILVFDITQQKTFDIVKGWVEELKANIQEEIIMVLCGNKIDLEQNRQVKSETAKLYADEINAMYVETSAKENEGVEGMFLEIGKKL 170          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB17_MOUSE (Ras-related protein Rab-17 OS=Mus musculus GN=Rab17 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 7.656e-35
Identity = 75/171 (43.86%), Postives = 115/171 (67.25%), Query Frame = 1
Query:   85 ATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNP-NMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            +T   +   +KLVLLG    GK+SL LR++K  F      T+G AFF++ L +  +++K EIWDTAGQE+Y S+  +Y+RGA AA++VYDIT + SF +A++W+++L+ +  P  +V+ L GNK DL + R+VT +E + +A+   L FMETSAK    V++IF  +A+ L
Sbjct:   11 STASGQPYVSKLVLLGSSSVGKTSLALRYMKQDF-SNVLPTVGCAFFTKVLDLGSSSLKLEIWDTAGQEKYQSVCHLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFQPGEVVVMLVGNKTDLGEEREVTFQEGKEFAESKSLLFMETSAKLNYQVSEIFNTVAQEL 180          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB17_HUMAN (Ras-related protein Rab-17 OS=Homo sapiens GN=RAB17 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.656e-35
Identity = 76/161 (47.20%), Postives = 110/161 (68.32%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMA-LAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLVLLG    GKSSL LR+VK  F +    T+G AFF++ + V   ++K EIWDTAGQE+YHS+  +Y+RGA AA++VYDIT + SF +A++W+++L+ + +P  V+  L GNK DL   R+VT +E + +A    L FMETSAK    V+++F  +A+ L
Sbjct:   21 KLVLLGSGSVGKSSLALRYVKNDF-KSILPTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSVCHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTFQEGKEFADSQKLLFMETSAKLNHQVSEVFNTVAQEL 180          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.998e-35
Identity = 70/160 (43.75%), Postives = 107/160 (66.88%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            K +++GD   GKS+L+L+FV  +F    + TIG  F S+++ +ND  +K +IWDTAGQE++ S+   YYRGA  A+IVYDIT + SFE    W+ + +   + ++   L GNKADL   R+V+  EA+ +A++NGL F ETSAKTA NV++ F +  +++
Sbjct:   26 KYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQI 185          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB25_RABIT (Ras-related protein Rab-25 OS=Oryctolagus cuniculus GN=RAB25 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.998e-35
Identity = 72/191 (37.70%), Postives = 116/191 (60.73%), Query Frame = 1
Query:  103 NINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL-----PRVQPAPNPSGMVLMDRPGGKD 660
            N   K+VL+G+ G GK++L+ RF + +F     +TIG  F ++T+ +  A VK +IWDTAG ERY ++   YYRGA  A++V+D+T   ++   ++W++EL       +V+ L GNK+DL  AR+V  EEA+ +A+ NGL F+ETSA  +TNV   F  + K +      ++Q +P  + + L     G++
Sbjct:   10 NFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVLLGTAAVKAQIWDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAEATIVVMLVGNKSDLSQAREVPTEEARMFAENNGLLFLETSALDSTNVELAFETVLKEIFAKVSKQIQNSPRSNAIALGSAQAGQE 200          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 1.306e-34
Identity = 72/191 (37.70%), Postives = 110/191 (57.59%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK----RLPRVQPAPNPSGMVLMDRPGGKDSECIM 675
            K + +GD G GKSS++LRF +  F E   STIG  F  +T+ +    +K +IWDTAGQER+       YRG  A ++VYD+T+Q SFE   KW+QE++     N++  + GNK+D++  + V    AQ +A    + F ETSAK A N+ D F  + K    R+   +P+   S  +++ +P  + S CI+
Sbjct:   10 KFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNKSDMISQKVVDPFLAQEFADSLDITFKETSAKQAINIEDAFISLVKLCIDRIEEFKPSSTSSSTIILKKPQSQKSNCII 200          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YPTV1_VOLCA2.015e-3541.97GTP-binding protein yptV1 OS=Volvox carteri GN=YPT... [more]
YPTM2_MAIZE2.015e-3542.41GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=... [more]
RAB1D_DICDI2.015e-3540.93Ras-related protein Rab-1D OS=Dictyostelium discoi... [more]
RAB2B_MOUSE3.436e-3543.83Ras-related protein Rab-2B OS=Mus musculus GN=Rab2... [more]
RABJ_DICDI4.488e-3545.73Ras-related protein RabJ OS=Dictyostelium discoide... [more]
RAB17_MOUSE7.656e-3543.86Ras-related protein Rab-17 OS=Mus musculus GN=Rab1... [more]
RAB17_HUMAN7.656e-3547.20Ras-related protein Rab-17 OS=Homo sapiens GN=RAB1... [more]
RAB2B_DICDI9.998e-3543.75Ras-related protein Rab-2B OS=Dictyostelium discoi... [more]
RAB25_RABIT9.998e-3537.70Ras-related protein Rab-25 OS=Oryctolagus cuniculu... [more]
RABA_DICDI1.306e-3437.70Ras-related protein RabA OS=Dictyostelium discoide... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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