EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.896e-50
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 1
Query:   79 NIATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARK-VTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 597
            N A      IN KLVLLGD   GKSSLVLRFVK QF +  ESTIGAAF +QTL +++ T VK EIWDTAGQERY SLAPMYYR A  AI+VYDIT  AS E+AK W++ELQ Q    +V+ALAGNK DL   R+ V   +A+AYA E  L F ETSAKTA NVN++F  IAK+LP
Sbjct:    4 NTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.997e-47
Identity = 93/164 (56.71%), Postives = 118/164 (71.95%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLD---ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 597
            KLVLLG+   GKSS+VLRFV   F E  E TIGAAF +Q + +N+ TVKFEIWDTAGQER+ SLAPMYYR A AA++VYD+T   SF +A+ WV+EL  Q + ++++AL GNK D+L     RKV  EE +  A+E GL F ETSAKT  NVND+F  I +++P
Sbjct:    9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIP 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB31_HUMAN (Ras-related protein Rab-31 OS=Homo sapiens GN=RAB31 PE=1 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 7.381e-46
Identity = 92/179 (51.40%), Postives = 126/179 (70.39%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN-PSGMVLMDRP 648
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF   KKWV+EL+  G  N+VMA+AGNK DL D R+V  ++A+ YA+  G   +ETSAK A N+ ++F  I++++P + P  N  +G + +++P
Sbjct:    7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGTIKVEKP 185          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2)

HSP 1 Score: 183.341 bits (464), Expect = 1.644e-45
Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 618
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF   KKWV+EL+  G  N+VMA+AGNK DL D R+V  ++A+ YA+  G   +ETSAK A N+ ++F  I++++P + P  N
Sbjct:    7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGALVVETSAKNAINIEELFQGISRQIPPLDPHEN 174          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.147e-45
Identity = 90/168 (53.57%), Postives = 119/168 (70.83%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPN 618
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQER+HSLAPMYYRG+AAA+IVYDIT Q SF   KKWV+EL+  G  N+VMA+AGNK DL D R+V  ++A+ YA+  G   +ETSAK A N+ ++F  I++++P + P  N
Sbjct:    7 KVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQEN 174          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB22A_MOUSE (Ras-related protein Rab-22A OS=Mus musculus GN=Rab22a PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.066e-44
Identity = 92/187 (49.20%), Postives = 122/187 (65.24%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR--VQPAPNPSGMVLMDRPGGKDSEC 669
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQER+ +LAPMYYRG+AAAIIVYDIT + +F   K WV+EL+  G P++V+A+AGNK DL D R+V   +A+ YA      F+ETSAK A N+N++F EI++R+P     PA    G  L  +P      C
Sbjct:    7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQHGPPSIVVAIAGNKCDLTDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTDANPASGGKGFKLRRQPSEPKRSC 193          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB22A_HUMAN (Ras-related protein Rab-22A OS=Homo sapiens GN=RAB22A PE=1 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.066e-44
Identity = 91/171 (53.22%), Postives = 120/171 (70.18%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 627
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQER+ +LAPMYYRG+AAAIIVYDIT + +F   K WV+EL+  G PN+V+A+AGNK DL+D R+V   +A+ YA      F+ETSAK A N+N++F EI++R+P    A  PSG
Sbjct:    7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSTD-ANLPSG 176          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB22A_CANFA (Ras-related protein Rab-22A OS=Canis familiaris GN=RAB22A PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.392e-44
Identity = 90/171 (52.63%), Postives = 119/171 (69.59%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSG 627
            K+ LLGD G GKSS+V RFV+  F      TIGA+F ++T+   +   KF IWDTAGQE + +LAPMYYRG+AAAIIVYDIT + +F   K WV+EL+  G PN+V+A+AGNK DL+D R+V   +A+ YA      F+ETSAK A N+N++F EI++R+P     P PSG
Sbjct:    7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQEAFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGPPNIVVAIAGNKCDLIDVREVMERDAKDYADSIHAIFVETSAKNAININELFIEISRRIPSADANP-PSG 176          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: YPT52_YEAST (GTP-binding protein YPT52 OS=Saccharomyces cerevisiae GN=YPT52 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.548e-40
Identity = 93/189 (49.21%), Postives = 118/189 (62.43%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVN--------DATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-GNPNMVMALAGNKADLLD--------------------ARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLVLLGD   GKSS+V RFVK  F E  ESTIGAAF SQ++ ++        D  +KFEIWDTAGQERY SLAPMYYR A AA++VYDIT + S ++A+ WV EL+ + G+ ++V+ L GNK DL                       R ++ EEA+ YAQE GL F E SAKT   V +IF +I ++L
Sbjct:    5 KLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKL 193          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB5B_DICDI (Putative ras-related protein Rab-5B OS=Dictyostelium discoideum GN=rab5B PE=5 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.548e-40
Identity = 84/161 (52.17%), Postives = 114/161 (70.81%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENG-LFFMETSAKTATNVNDIFYEIAKRL 594
            KLVLLG++  GK+ +  R V+ +F    +STIGAAF  +++ V++  +K EIWDTAGQERY SL PMYYRGAAAA++VYDIT + +FE  K+WV ELQ   +PN+++ALAGNK DL + R+V  +E   Y  E G   F ETSA +  N+N++F EI +RL
Sbjct:   51 KLVLLGEMNTGKTCISSRLVRNEF-GPTDSTIGAAFLVKSMVVDNINIKLEIWDTAGQERYRSLTPMYYRGAAAAVVVYDITKKNTFETLKRWVSELQKHASPNLILALAGNKVDLPN-REVQVDEVNRYISELGNAIFFETSAASGQNINELFTEICRRL 209          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
YPT5_SCHPO2.896e-5062.29GTP-binding protein ypt5 OS=Schizosaccharomyces po... [more]
VPS21_YEAST2.997e-4756.71Vacuolar protein sorting-associated protein 21 OS=... [more]
RAB31_HUMAN7.381e-4651.40Ras-related protein Rab-31 OS=Homo sapiens GN=RAB3... [more]
RAB31_RAT1.644e-4553.57Ras-related protein Rab-31 OS=Rattus norvegicus GN... [more]
RAB31_MOUSE2.147e-4553.57Ras-related protein Rab-31 OS=Mus musculus GN=Rab3... [more]
RB22A_MOUSE1.066e-4449.20Ras-related protein Rab-22A OS=Mus musculus GN=Rab... [more]
RB22A_HUMAN1.066e-4453.22Ras-related protein Rab-22A OS=Homo sapiens GN=RAB... [more]
RB22A_CANFA1.392e-4452.63Ras-related protein Rab-22A OS=Canis familiaris GN... [more]
YPT52_YEAST3.548e-4049.21GTP-binding protein YPT52 OS=Saccharomyces cerevis... [more]
RAB5B_DICDI3.548e-4052.17Putative ras-related protein Rab-5B OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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