EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RRAS_HUMAN (Ras-related protein R-Ras OS=Homo sapiens GN=RRAS PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 56/189 (29.63%), Postives = 100/189 (52.91%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASF-ERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGGKDSECIML 678
            KLV++G  G GKS+L ++F++  F+   + TI  ++ ++  +V+    + +I DTAGQE + ++   Y R     ++V+ I ++ SF E  K + Q L+ +   +  + L GNKADL   R+V   EA A+   + + + E SAK   NV++ F ++ + + + Q    P       R  G    C++L
Sbjct:   31 KLVVVGGGGVGKSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDGIPARLDILDTAGQEEFGAMREQYMRAGHGFLLVFAINDRQSFNEVGKLFTQILRVKDRDDFPVVLVGNKADLESQRQVPRSEASAFGASHHVAYFEASAKLRLNVDEAFEQLVRAVRKYQEQELPPSPPSAPRKKGGGCPCVLL 218          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: REBL1_RAT (GTPase RhebL1 OS=Rattus norvegicus GN=Rhebl1 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 56/165 (33.94%), Postives = 93/165 (56.36%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQ 606
            K+ +LG    GK+SL  +FV+G+F++G + T+   + S+T+ +        + DTAGQ++Y  L   +  G    ++VY++T+  SF+  K   Q+LQ   G   + + L GNKADL   R+V A E +  A+  G  FME+SA+    + DIF  + + + RV+
Sbjct:    8 KVAILGYRSVGKTSLAHQFVEGEFLKGYDPTVENTY-SKTVTLGKDEFHLHLVDTAGQDKYSILPYSFIIGVHGYVLVYNVTSLRSFQIVKNLYQKLQEGHGKTRLPVLLVGNKADLSADREVQAVEGKKLAESWGATFMESSARDNQLIQDIFIRVIQEIARVE 171          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB40B_HUMAN (Ras-related protein Rab-40B OS=Homo sapiens GN=RAB40B PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 52/158 (32.91%), Postives = 84/158 (53.16%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            K +L+GD   GK  ++     G          G  + + T+ ++   VK ++WDT+GQ R+ ++   Y RGA   I+VYDI N+ SF+   +W++E+     P +   L GN+  L   R+V  E+AQAYA+  G+ F E S     N+ + F E+A+
Sbjct:   16 KFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDYKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFDGIDRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELAR 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: GSP2_YEAST (GTP-binding nuclear protein GSP2/CNR2 OS=Saccharomyces cerevisiae GN=GSP2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 58/173 (33.53%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL---PRVQPAPNPS 624
            KLVL+GD G GK++ V R + G+F +   +TIG      +   N   +KF++WDTAGQE++  L   YY  A  AII++D+T++ +++    W ++L  +   N+ + L GNK D+ + RKV A+    + ++N L + + SAK+  N    F  +A++L   P+++   +P+
Sbjct:   15 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPA 184          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: GSP1_YEAST (GTP-binding nuclear protein GSP1/CNR1 OS=Saccharomyces cerevisiae GN=GSP1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.550e-19
Identity = 58/173 (33.53%), Postives = 101/173 (58.38%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL---PRVQPAPNPS 624
            KLVL+GD G GK++ V R + G+F +   +TIG      +   N   +KF++WDTAGQE++  L   YY  A  AII++D+T++ +++    W ++L  +   N+ + L GNK D+ + RKV A+    + ++N L + + SAK+  N    F  +A++L   P+++   +P+
Sbjct:   14 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKLAGNPQLEFVASPA 183          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASH_RAT (GTPase HRas OS=Rattus norvegicus GN=Hras1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 60/181 (33.15%), Postives = 103/181 (56.91%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSGMVLM 639
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE   ++ +++ + + + ++ M L GNK DL  AR V + +AQ  A+  G+ ++ETSAKT   V D FY + +     +L ++ P P+ SG+  M
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESGLGCM 182          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASH_MSVMO (GTPase HRas OS=Moloney murine sarcoma virus GN=H-RAS PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 61/193 (31.61%), Postives = 107/193 (55.44%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSGMVLMDRPGGKDSECIM 675
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE   ++ +++ + + + ++ M L GNK DL  AR V + +AQ  A+  G+ +++TSAKT   V D FY + +     +L ++ P P+ SG      PG    +C++
Sbjct:    5 KLVVVGAKGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIKTSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG------PGCMSCKCVL 188          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAN_DANRE (GTP-binding nuclear protein Ran OS=Danio rerio GN=ran PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 55/163 (33.74%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  106 INAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            +  KLVL+GD G GK++ V R + G+F +   +T+G          N   +K+ +WDTAGQE++  L   YY  A  AII++D+T++ +++    W ++L  +   N+ + L GNK D+ D RKV A+    + ++N L + + SAK+  N    F  +A++L
Sbjct:    8 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 167          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RANT_MOUSE (GTP-binding nuclear protein Ran, testis-specific isoform OS=Mus musculus GN=Rasl2-9 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 54/171 (31.58%), Postives = 97/171 (56.73%), Query Frame = 1
Query:   82 IATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            +A  G   +  K+VL+GD G GK++ + R + G+F +   +T+G    +     N   +KF +WDTAGQE++  L   YY  A  AII++D+T++ +++    W ++L  +   N+ + L GNK D+ D  KV A+    + ++N L + + SA++  N    F+ +A++L
Sbjct:    1 MAAQGEPQVQFKVVLVGDGGTGKTTFMKRHLTGEFEKEYVATLGVEVHTLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPSWHKDL-VRVCENIPIVLCGNKVDVKD-MKVKAKPILFHRKKN-LQYYDISARSNYNFEKPFFWLARKL 168          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB36_HUMAN (Ras-related protein Rab-36 OS=Homo sapiens GN=RAB36 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 2.024e-19
Identity = 59/172 (34.30%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   79 NIATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQA--YAQENGLFFMETSAKTATNVNDIFYEIA 585
            N  T G K   +K+V++GD+  GK+SL+ RF K  F    ++TIG  F  +   +       +IWDTAGQE++  +A  YYRGA   I  +D+T+  + E  ++W+++ L+     +  + L G K DLL        EA A   A+E    +   SAKT  NV   F  +A
Sbjct:  115 NTGTVGLKL--SKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVA 284          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RRAS_HUMAN1.550e-1929.63Ras-related protein R-Ras OS=Homo sapiens GN=RRAS ... [more]
REBL1_RAT1.550e-1933.94GTPase RhebL1 OS=Rattus norvegicus GN=Rhebl1 PE=2 ... [more]
RB40B_HUMAN1.550e-1932.91Ras-related protein Rab-40B OS=Homo sapiens GN=RAB... [more]
GSP2_YEAST1.550e-1933.53GTP-binding nuclear protein GSP2/CNR2 OS=Saccharom... [more]
GSP1_YEAST1.550e-1933.53GTP-binding nuclear protein GSP1/CNR1 OS=Saccharom... [more]
RASH_RAT2.024e-1933.15GTPase HRas OS=Rattus norvegicus GN=Hras1 PE=1 SV=... [more]
RASH_MSVMO2.024e-1931.61GTPase HRas OS=Moloney murine sarcoma virus GN=H-R... [more]
RAN_DANRE2.024e-1933.74GTP-binding nuclear protein Ran OS=Danio rerio GN=... [more]
RANT_MOUSE2.024e-1931.58GTP-binding nuclear protein Ran, testis-specific i... [more]
RAB36_HUMAN2.024e-1934.30Ras-related protein Rab-36 OS=Homo sapiens GN=RAB3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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