EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAS_LENED (Ras-like protein OS=Lentinula edodes PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 54/181 (29.83%), Postives = 96/181 (53.04%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGG 654
            KLV++G  G GKS+L ++F++  F++  + TI  ++  Q + ++D     ++ DTAGQE Y ++   Y R     ++VY IT++ SFE    + Q+ L+ +      + +  NK DL   R+V   E +  A+  G  F+ETSAK   NV+  F ++ + + +       +G ++    GG
Sbjct:   12 KLVVVGGGGVGKSALTIQFIQSHFVDEYDPTIEDSYRKQCV-IDDEVALLDVLDTAGQEEYGAMREQYMRTGEGFLLVYSITSRNSFEEISTFHQQILRVKDQDTFPVVVVANKCDLEYERQVGMNEGRDLARHFGCKFVETSAKVRINVDQAFQDLVREIRKYNKEQQTTGRMMTGGGGG 191          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAN_CARAU (GTP-binding nuclear protein Ran OS=Carassius auratus GN=ran PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.643e-19
Identity = 55/163 (33.74%), Postives = 93/163 (57.06%), Query Frame = 1
Query:  106 INAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            +  KLVL+GD G GK++ V R + G+F +   +T+G          N   +K+ +WDTAGQE++  L   YY  A  AII++D+T++ +++    W ++L  +   N+ + L GNK D+ D RKV A+    + ++N L + + SAK+  N    F  +A++L
Sbjct:    8 VQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDL-VRVCENIPIVLCGNKVDIKD-RKVKAKSIVFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 167          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASW_DICDI (Ras-like protein rasW OS=Dictyostelium discoideum GN=rasW PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 61/202 (30.20%), Postives = 109/202 (53.96%), Query Frame = 1
Query:   91 TGNKNINA-KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMDRPGGKDSECIMLLLNT 690
            T  KN N   L ++GD G GK+++ ++F+   F+   + TI  ++  Q L V+D     +I DTAGQ+   ++   + R     I+VY +T+++SF++ + + +++ +   + ++ + + GNK DL D R+VT +E +  A+  G+ FME SAK  TNV ++F E  + + R +                KDS+    L+NT
Sbjct:    2 TSYKNNNVISLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCL-VDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFILVYSVTSRSSFDQIQFFREQIIRVLDSDDVPIMMIGNKIDLDDERQVTFQEGKDLARCLGMSFMEVSAKNRTNVEEVFNETVRIVKRKEDP--------QSHKPSKDSDSKKPLVNT 194          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASH_RRASV (Transforming protein p29 OS=Rasheed rat sarcoma virus GN=RAS PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 61/193 (31.61%), Postives = 106/193 (54.92%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSGMVLMDRPGGKDSECIM 675
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE   ++ +++ + + + ++ M L GNK DL  A  V + +AQ  A+  G+ ++ETSAKT   V D FY + +     +L ++ P P+ SG      PG    +C++
Sbjct:   64 KLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-AHTVESRQAQDLARSYGIPYIETSAKTRPGVEDAFYTLVREIRQHKLRKLNP-PDESG------PGCMSCKCVL 247          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASH_MOUSE (GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 61/193 (31.61%), Postives = 106/193 (54.92%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSGMVLMDRPGGKDSECIM 675
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +  DTAGQE Y ++   Y R     + V+ I N  SFE   ++ ++++  + + ++ M L GNK DL  AR V + +AQ  A+  G+ ++ETSAKT   V D FY + +     +L ++ P P+ SG      PG    +C++
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDYLDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG------PGCMSCKCVL 188          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: GSP1_ENCCU (GTP-binding nuclear protein GSP1 OS=Encephalitozoon cuniculi GN=GSP1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.452e-19
Identity = 51/164 (31.10%), Postives = 88/164 (53.66%), Query Frame = 1
Query:  100 KNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATV-KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            + +  K+ L+GD G GK++ + R + G+F +   +T+GA     T   +   V KF +WDTAGQE+   L  +YY GA+ AI  +D+T++ + +   +WV+E QA       + +  NK D+ + +K++ +      +     + E SAKTA N    F  +A+
Sbjct:    4 RELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIKFNVWDTAGQEKKAVLKDVYYIGASGAIFFFDVTSRITCQNLARWVKEFQAVVGNEAPIVVCANKIDIKNRQKISKKLVMEVLKGKNYEYFEISAKTAHNFGLPFLHLAR 167          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            K +L+GD   GKS ++     G          G  + + T+ ++   VK ++WDT+GQ R+ ++   Y RGA   I+VYDI N+ SFE   +W+++++    P +   L GN+  L   R+V  E+AQAYA+  G+ F E S     N+ + F E+A+
Sbjct:   16 KFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELAR 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB40C_MOUSE (Ras-related protein Rab-40C OS=Mus musculus GN=Rab40c PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            K +L+GD   GK  ++     G        + G  + + T+ ++   VK E+WDT+GQ R+ ++   Y RGA   ++VYDITN+ SF+   +W++E+     P +   L GN+  L   R+V  E+A+AYA++N + F E S     NV + F E+++
Sbjct:   16 KFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHA-PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSR 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB40C_HUMAN (Ras-related protein Rab-40C OS=Homo sapiens GN=RAB40C PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            K +L+GD   GK  ++     G        + G  + + T+ ++   VK E+WDT+GQ R+ ++   Y RGA   ++VYDITN+ SF+   +W++E+     P +   L GN+  L   R+V  E+A+AYA++N + F E S     NV + F E+++
Sbjct:   16 KFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHA-PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSR 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB40B_MOUSE (Ras-related protein Rab-40B OS=Mus musculus GN=Rab40b PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.509e-19
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            K +L+GD   GK  ++     G          G    + T+ ++   VK ++WDT+GQ R+ ++   Y RGA   ++VYDI N+ SF+   +W++E+     P +   L GN+  L   R+V  E+AQAYA+  G+ F E S     N+ + F E+A+
Sbjct:   16 KFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDHKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELAR 172          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAS_LENED2.643e-1929.83Ras-like protein OS=Lentinula edodes PE=3 SV=1[more]
RAN_CARAU2.643e-1933.74GTP-binding nuclear protein Ran OS=Carassius aurat... [more]
RASW_DICDI3.452e-1930.20Ras-like protein rasW OS=Dictyostelium discoideum ... [more]
RASH_RRASV3.452e-1931.61Transforming protein p29 OS=Rasheed rat sarcoma vi... [more]
RASH_MOUSE3.452e-1931.61GTPase HRas OS=Mus musculus GN=Hras1 PE=1 SV=1[more]
GSP1_ENCCU3.452e-1931.10GTP-binding nuclear protein GSP1 OS=Encephalitozoo... [more]
RB40L_HUMAN4.509e-1933.54Ras-related protein Rab-40A-like OS=Homo sapiens G... [more]
RB40C_MOUSE4.509e-1932.91Ras-related protein Rab-40C OS=Mus musculus GN=Rab... [more]
RB40C_HUMAN4.509e-1932.91Ras-related protein Rab-40C OS=Homo sapiens GN=RAB... [more]
RB40B_MOUSE4.509e-1932.28Ras-related protein Rab-40B OS=Mus musculus GN=Rab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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