EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_MOUSE (GTPase KRas OS=Mus musculus GN=Kras PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19
Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + ++++  + + ++ M L GNK DL  +R V  ++AQ  A+  G+ F+ETSAKT   V D FY + + +
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_MELGA (GTPase KRas OS=Meleagris gallopavo GN=KRAS PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19
Identity = 54/161 (33.54%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + ++++  + + ++ M L GNK DL  +R V  ++AQ  A+  G+ F+ETSAKT   V+D FY + + +
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASH_MSVHA (Transforming protein p29 OS=Harvey murine sarcoma virus GN=H-RAS PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19
Identity = 60/193 (31.09%), Postives = 105/193 (54.40%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSGMVLMDRPGGKDSECIM 675
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DT GQE Y ++   Y R     + V+ I N  SFE   ++ +++ + + + ++ M L GNK DL   R V + +AQ  A+  G+ ++ETSAKT   V D FY + +     +L ++ P P+ SG      PG    +C++
Sbjct:   57 KLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-GRTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG------PGCMSCKCVL 240          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: GSP1_ASHGO (GTP-binding nuclear protein GSP1/Ran OS=Ashbya gossypii GN=GSP1 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.691e-19
Identity = 55/160 (34.38%), Postives = 92/160 (57.50%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLVL+GD G GK++ V R + G+F +   +TIG          N   +KF++WDTAGQE++  L   YY  A   II++D+T++ +++    W ++L  +   N+ + L GNK D+ + RKV A+    + ++N L + + SAK+  N    F  +A++L
Sbjct:    9 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLAFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCGIIMFDVTSRITYKNVPNWHRDL-VRVCENIPIVLCGNKVDVKE-RKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 165          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASS_DICDI (Ras-like protein rasS OS=Dictyostelium discoideum GN=rasS PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 1
Query:  109 NAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLM--DRPGGKDSECIML 678
            N KLVL+G  G GKS L ++F+  +F++  + T+  ++  QT  V+      +I+DTAGQE + ++   Y R     + VY IT   SF+   +    L + +   ++   L GNK DL + R+V+  E +  A++    F+ETSAK   NV++ FYE+ + + + + +   S       D+P  K   C +L
Sbjct:    3 NFKLVLVGPGGVGKSCLTIQFIAQKFVDEYDPTLEDSYRKQT-TVDGEECLLDIYDTAGQEDFSAVRDQYMRTGEGFLCVYSITYLQSFKEIHRLHNHLLKVKDLDSVPFVLVGNKCDLNEYREVSTAEGEELAKKLNCKFLETSAKERINVSESFYELVREVKKARQSNQHSNSQEQNTDQPIKKKKSCNLL 194          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_MSVKI (GTPase KRas OS=Kirsten murine sarcoma virus GN=K-RAS PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 54/161 (33.54%), Postives = 91/161 (56.52%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DT GQE Y ++   Y R     + V+ I N  SFE    + ++L+  + + ++ M L GNK DL  +R V  ++AQ  A+  G+ F+ETSAKT   V D FY + + +
Sbjct:    5 KLVVVGASGVGKSALTIQLIQNHFVDEYDPTIQDSYRKQVV-IDGETCLLDILDTTGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQLKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQELARSYGIPFIETSAKTRQRVEDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_HUMAN (GTPase KRas OS=Homo sapiens GN=KRAS PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + ++++  + + ++ M L GNK DL  +R V  ++AQ  A+  G+ F+ETSAKT   V D FY + + +
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAS2_HYDMA (Ras-like protein RAS2 OS=Hydra magnipapillata GN=RAS2 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 51/175 (29.14%), Postives = 100/175 (57.14%), Query Frame = 1
Query:   91 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKW-VQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPA 612
            +G+ +   KLV++G  G GKS+L ++F++  F++  + TI  ++  Q + ++D     +I DTAGQE + ++   Y R     ++V+ +T+++SF+   ++  Q L+ +      M L GNK+DL + R V+  EAQ   ++  + ++E+SAK   NV+  F+++ + +     A
Sbjct:    2 SGDLDRQYKLVVVGGGGVGKSALTIQFIQSHFVQDYDPTIEDSYRKQCV-IDDKVAHLDILDTAGQEEFSAMRDEYMRTGEGFLLVFSVTDRSSFDEIPRFHTQILRVKDIEEFPMILVGNKSDLENERTVSTAEAQELGRKLKVSYLESSAKQRINVDAAFHDLVRAIRNANKA 175          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAPC_DICDI (Ras-related protein rapC OS=Dictyostelium discoideum GN=rapC PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 56/157 (35.67%), Postives = 87/157 (55.41%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQAS---FERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIF 573
            K+V+LG  G GK+SL +RFV G F+E  + TI   +           +  EI DT+G ERY ++  +Y R A A ++VY IT++ S    E  K ++ +++ +    + M + GNK DL D R V  EE +A  ++ G+  F+ETSAK   N+   +
Sbjct:    5 KVVVLGASGTGKTSLTVRFVNGDFVETYDPTIEDLYRKVIETNKGEHIMLEIMDTSGTERYLAMRDLYIRNAQAFVLVYSITSRVSLLELENIKNYICQVKDRPISQIPMVVLGNKCDLEDTRVVFPEEVEALTKKWGIEDFLETSAKIDMNIQSAY 161          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAN_CAEEL (GTP-binding nuclear protein ran-1 OS=Caenorhabditis elegans GN=ran-1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 55/160 (34.38%), Postives = 91/160 (56.88%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLVL+GD G GK++ V R + G+F +   +T+G          N   ++F +WDTAGQE++  L   YY     AII++D+T + +++    W ++L A+   N+ + L GNK D+ D RKV A+    + ++N L + + SAK+  N    F  +A++L
Sbjct:   11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-ARVCENIPIVLCGNKVDVKD-RKVKAKTITFHRKKN-LQYYDISAKSNYNFEKPFLWLARKL 167          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RASK_MOUSE7.691e-1933.54GTPase KRas OS=Mus musculus GN=Kras PE=1 SV=1[more]
RASK_MELGA7.691e-1933.54GTPase KRas OS=Meleagris gallopavo GN=KRAS PE=2 SV... [more]
RASH_MSVHA7.691e-1931.09Transforming protein p29 OS=Harvey murine sarcoma ... [more]
GSP1_ASHGO7.691e-1934.38GTP-binding nuclear protein GSP1/Ran OS=Ashbya gos... [more]
RASS_DICDI1.004e-1831.09Ras-like protein rasS OS=Dictyostelium discoideum ... [more]
RASK_MSVKI1.004e-1833.54GTPase KRas OS=Kirsten murine sarcoma virus GN=K-R... [more]
RASK_HUMAN1.004e-1833.54GTPase KRas OS=Homo sapiens GN=KRAS PE=1 SV=1[more]
RAS2_HYDMA1.004e-1829.14Ras-like protein RAS2 OS=Hydra magnipapillata GN=R... [more]
RAPC_DICDI1.004e-1835.67Ras-related protein rapC OS=Dictyostelium discoide... [more]
RAN_CAEEL1.004e-1834.38GTP-binding nuclear protein ran-1 OS=Caenorhabditi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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