EY685267

Overview
NameEY685267
Unique NameEY685267
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RABL_DICDI (Ras-related protein RabL OS=Dictyostelium discoideum GN=rabL PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.004e-18
Identity = 53/166 (31.93%), Postives = 85/166 (51.20%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADL----LDARKVTAEEAQAYAQENGLF----FMETSAKTATNVNDIFYEIAK 588
            K++ LGD   GK+SL   +V G++      +IG  +F + L V +  V   +WDT GQER+ + +P Y+RGA    + +DI N+ SF    KW+ E+      N+   L G K+D+        K   E+     ++ G+     + ETSAK + NV +++   AK
Sbjct:    9 KIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWDTCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYCYGNIPFVLVGTKSDIPRTDKSISKARIEQWCKNIEDQGIIDKVHYFETSAKLSQNVTELYNVAAK 174          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 54/163 (33.13%), Postives = 91/163 (55.83%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 600
            KLV+LG  G GKS++ ++F+  +F E  + TI  A+  + + ++D     +I DTAGQ  + ++   Y R     II Y IT++ SF   +++ Q + + +   +  + L GNK+DL   R+VT EE  A A+E    F ETSA     ++D+F+ + + + R
Sbjct:   23 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDLKQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRR 184          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASZ_DICDI (Ras-like protein rasZ OS=Dictyostelium discoideum GN=rasZ PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 50/174 (28.74%), Postives = 103/174 (59.20%), Query Frame = 1
Query:   82 IATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPR 600
            +A+  N N+  +L ++GD G GK+++ ++F+   F+   + TI  ++  Q + ++D     +I DTAGQ+   ++   + R     ++VY IT+++SF++ + + +++ +     ++ + + GNK+DL D R+VT +E +  A+  G+ FME SAK+  N+ ++F E  + + R
Sbjct:    1 MASYKNNNL-VRLCIMGDGGVGKTAVTIQFISNHFVYYYDPTIEDSYRKQCV-IDDQVYMLDILDTAGQDELTAMRDQWIRSCEGFVLVYSITSRSSFDQVQFFREQIIRVLDRDDVPIMMIGNKSDLDDERQVTYQEGKDLARCLGMSFMEVSAKSRANIEEVFNETVRSVKR 172          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_XENLA (GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 54/161 (33.54%), Postives = 93/161 (57.76%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G VG GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + +++ + + + ++ M L GNK   L +R V  ++AQ  A+  G+ F+ETSAKT   V+D FY + + +
Sbjct:    5 KLVVVGAVGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNIKSFEDIHHYREQIKRVKDSEDVPMVLVGNKC-ALPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_ORYLA (GTPase KRas OS=Oryzias latipes GN=kras1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + ++++  + + ++ M L GNK DL   R V  ++AQ  A+  G+ F+ETSAKT   V+D FY + + +
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PTRTVDTKQAQDLARSFGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RANL_DROME (GTP-binding nuclear protein Ran-like OS=Drosophila melanogaster GN=ran-like PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.312e-18
Identity = 56/183 (30.60%), Postives = 98/183 (53.55%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL---PRVQ----PAPNPSGMVLMD 642
            KL+L+GD G GK++LV R + G+F     +T+G          N    + ++WDTAGQERY  L   Y+  +  AII++D+ +  ++   K+W ++L  +   N+ + + GNK D++   K T ++   + ++  ++ +E SAK+  NV   F  + ++L   P +Q    PA  P  +V  D
Sbjct:   12 KLILIGDGGTGKTTLVKRHLTGEFKMQYNATLGVEVEQLLFNTNRGVFRIDVWDTAGQERYGGLRDGYFVQSQCAIIMFDVASSNTYNNVKRWHRDL-VRVCGNIPIVICGNKVDIM--HKKTWKKGVDFDRKTNIYLIEMSAKSNYNVEKPFVYLLRKLVGDPSLQLVQSPAIQPPKVVFTD 191          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RB32C_DICDI (Ras-related protein Rab-32C OS=Dictyostelium discoideum GN=rab32C PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.713e-18
Identity = 58/191 (30.37%), Postives = 94/191 (49.21%), Query Frame = 1
Query:   97 NKN-----INAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGL-FFMETSAKTATNVNDIFYEIAK-RLPRVQPAPNPSGMVLMDR 645
            NKN     I+ K++++G +  GK+S++ R+    F    + TIG  F  + L +    V  ++WD AGQER+  +  +Y++ A  A+IV+D T   +F  AK W  ++     N N+   L  NK DLL       E+   + ++N    +  TSAK  T +N+   E+ K  L   Q     +G  L D+
Sbjct:   19 NKNNDDEAISLKILVVGKLACGKTSIIQRYCHNNFQPKYKPTIGVDFQQKVLEIMGQKVLLQLWDIAGQERFGHMTRVYFQNAHGAVIVFDATRSGTFLGAKAWKDDIDYCFNNENLPTILLANKCDLLTPPYTFPEDINTFCEQNRFNKYFYTSAKEDTGINEALEELVKIILESYQTQEQSTGFKLSDQ 209          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RASK_RIVMA (GTPase KRas OS=Rivulus marmoratus GN=kras PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.713e-18
Identity = 54/161 (33.54%), Postives = 92/161 (57.14%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 594
            KLV++G  G GKS+L ++ ++  F++  + TI  ++  Q + ++  T   +I DTAGQE Y ++   Y R     + V+ I N  SFE    + ++++  + + ++ M L GNK DL   R V  ++AQ  A+  G+ F+ETSAKT   V+D FY + + +
Sbjct:    5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKYDL-PTRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 93.5893 bits (231), Expect = 1.713e-18
Identity = 50/159 (31.45%), Postives = 93/159 (58.49%), Query Frame = 1
Query:  115 KLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 588
            KLV++G  G GKS+L ++  +  F++  + TI  ++  Q + ++D     +I DTAGQE Y ++   Y R     ++VY IT+++S +    + Q+ L+ +    + + + GNK+DL + ++V+ ++    A++    F+ETSAK A NV + FY +A+
Sbjct:   12 KLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVV-IDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTLAR 169          
BLAST of EY685267 vs. ExPASy Swiss-Prot
Match: RAB38_MOUSE (Ras-related protein Rab-38 OS=Mus musculus GN=Rab38 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.713e-18
Identity = 56/166 (33.73%), Postives = 90/166 (54.22%), Query Frame = 1
Query:   91 TGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEGGESTIGAAFFSQTLAVNDATV-KFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLF-FMETSAKTATNVND 567
            T +K    KL+++GD+G GK+S++ R+V   F     +TIG  F  + L  +  TV + ++WD AGQER+ ++  +YYR A  A IV+D+T  A+FE   KW  +L ++     G P  V+ LA       D       +   + +E+G   + ETSAK   N+++
Sbjct:    3 TPHKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWDIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLLANKCDQGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDE 168          
The following BLAST results are available for this feature:
BLAST of EY685267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RABL_DICDI1.004e-1831.93Ras-related protein RabL OS=Dictyostelium discoide... [more]
RIT1_HUMAN1.312e-1833.13GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 P... [more]
RASZ_DICDI1.312e-1828.74Ras-like protein rasZ OS=Dictyostelium discoideum ... [more]
RASK_XENLA1.312e-1833.54GTPase KRas OS=Xenopus laevis GN=kras PE=2 SV=1[more]
RASK_ORYLA1.312e-1833.54GTPase KRas OS=Oryzias latipes GN=kras1 PE=2 SV=1[more]
RANL_DROME1.312e-1830.60GTP-binding nuclear protein Ran-like OS=Drosophila... [more]
RB32C_DICDI1.713e-1830.37Ras-related protein Rab-32C OS=Dictyostelium disco... [more]
RASK_RIVMA1.713e-1833.54GTPase KRas OS=Rivulus marmoratus GN=kras PE=2 SV=... [more]
RAS2_YEAST1.713e-1831.45Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RAB38_MOUSE1.713e-1833.73Ras-related protein Rab-38 OS=Mus musculus GN=Rab3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685267 ID=EY685267; Name=EY685267; organism=Citrus sinensis; type=EST; length=921bp
CCACGCGTCCGTTTTTTTTTCCTTAATTTCCCCTTTAACCCCCCGATCCA
ATTTTGATTCGGTCTTCGATCACATTAAAACATCGCCACCACTGGAAACA
AAAACATCAATGCTAAATTGGTGCTGCTTGGAGATGTTGGAGCTGGAAAG
TCTAGTCTTGTACTGCGCTTTGTTAAAGGCCAATTCATTGAGGGGGGGGA
ATCAACCATTGGAGCTGCCTTTTTCTCACAAACATTAGCTGTAAATGATG
CTACTGTAAAATTTGAGATTTGGGATACAGCAGGACAAGAGAGATACCAT
AGCTTGGCTCCAATGTACTATAGAGGAGCTGCCGCAGCAATTATTGTGTA
CGATATAACAAATCAAGCCTCATTTGAGCGTGCTAAGAAATGGGTCCAAG
AACTTCAGGCACAAGGCAATCCAAATATGGTTATGGCACTTGCTGGTAAC
AAAGCTGACTTGTTGGATGCGAGGAAGGTCACGGCAGAGGAAGCACAAGC
TTATGCCCAGGAAAATGGCCTATTCTTTATGGAAACCTCTGCAAAAACAG
CAACCAATGTGAATGACATTTTCTATGAAATAGCAAAGAGATTGCCTCGA
GTGCAGCCAGCACCAAATCCATCAGGAATGGTTCTTATGGATAGACCTGG
GGGAAAGGACAGCGAGTGCATCATGTTGCTCTTAAATACTTGGGTGGTGA
TGGACCCTGTCTGTTTTTATCTTCTAAATGGCTTCCTCTAACTTTACTAG
GAACTTTTTTGAGTCTTATCCTTCCCAGGTTTGCTATCCCGGGTATTTTT
TTGTTTAAAATATCCCAACATTTAACTTGCCTTTCTGCCATTTTGGATTA
AACCTGGAAAATTAAATTTGGAAAGGGGGTTTCCCCTGGAAATCAAATTC
CCGGGGGGATGTTTCCCCTTT
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