EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_ANASO (Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.654e-24
Identity = 35/49 (71.43%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLVSG+VDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87

HSP 2 Score: 54.299 bits (129), Expect = 2.654e-24
Identity = 25/44 (56.82%), Postives = 32/44 (72.73%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA +K+ LI   +G +HE E  +D+YILDA EE G DLP+SCRA
Sbjct:    1 MATFKVTLINEAEGTKHEIEVPDDEYILDAAEEQGYDLPFSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_MASLA (Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.654e-24
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKL+SG+VDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87

HSP 2 Score: 55.0694 bits (131), Expect = 2.654e-24
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI   +G     E  +DQYILDA EEAG+DLPYSCRA
Sbjct:    1 MATYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SYNY3 (Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803) GN=petF PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 2.654e-24
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ +GSVDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   37 PYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 85

HSP 2 Score: 56.9954 bits (136), Expect = 2.654e-24
Identity = 28/43 (65.12%), Postives = 31/43 (72.09%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA Y +KLI P GE    E  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 MASYTVKLITPDGES-SIECSDDTYILDAAEEAGLDLPYSCRA 42
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.617e-24
Identity = 33/49 (67.35%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLV+G++DQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   38 PYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSD 86

HSP 2 Score: 55.0694 bits (131), Expect = 7.617e-24
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI  +G     +  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 MATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRA 43
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_MESCR (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.759e-23
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ SGSV+Q DGSFLDD+Q++ G++LTC+ YP  +
Sbjct:   87 PYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGD 135

HSP 2 Score: 62.7734 bits (151), Expect = 2.759e-23
Identity = 35/70 (50.00%), Postives = 46/70 (65.71%), Query Frame = 3 
Query:  162 PTSLGSVKGIS*TFGLKCSPNFQ--ASMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            PT++G        FGLK S +     +MA YK+ L+ P+G++ E E  +D YILDA EEAG+DLPYSCRA
Sbjct:   29 PTNVGRA-----LFGLKSSASRGRVTAMAAYKVTLVTPEGKQ-ELECPDDVYILDAAEEAGIDLPYSCRA 92
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_THEVL (Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.819e-23
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC+ YP S+
Sbjct:   38 PFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSD 86

HSP 2 Score: 56.6102 bits (135), Expect = 4.819e-23
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ L+ P G E   +  ED+YILD  EE G+DLP+SCRA
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRA 43
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_THEEB (Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.819e-23
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC+ YP S+
Sbjct:   38 PFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSD 86

HSP 2 Score: 56.6102 bits (135), Expect = 4.819e-23
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ L+ P G E   +  ED+YILD  EE G+DLP+SCRA
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRA 43
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SYNEN (Ferredoxin-1 OS=Synechococcus elongatus naegeli GN=petF1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.819e-23
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKL+ G VDQSD SFLDD+Q+E G++LTC+ YP S+
Sbjct:   38 PFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSD 86

HSP 2 Score: 56.6102 bits (135), Expect = 4.819e-23
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ L+ P G E   +  ED+YILD  EE G+DLP+SCRA
Sbjct:    1 MATYKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRA 43
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SPIMA (Ferredoxin OS=Spirulina maxima PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.271e-23
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ SGS+DQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87

HSP 2 Score: 51.6026 bits (122), Expect = 6.271e-23
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI   +G     +  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 MATYKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_CHLFR (Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 8.162e-23
Identity = 33/49 (67.35%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ SG+VDQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSD 87

HSP 2 Score: 52.7582 bits (125), Expect = 8.162e-23
Identity = 26/44 (59.09%), Postives = 30/44 (68.18%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI   +G     E  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 MATYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRA 44
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER1_ANASO2.654e-2471.43Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=... [more]
FER_MASLA2.654e-2469.39Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1... [more]
FER_SYNY32.654e-2467.35Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803... [more]
FER1_APHFL7.617e-2467.35Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2[more]
FER1_MESCR2.759e-2355.10Ferredoxin-1, chloroplastic OS=Mesembryanthemum cr... [more]
FER_THEVL4.819e-2363.27Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=pe... [more]
FER_THEEB4.819e-2363.27Ferredoxin-1 OS=Thermosynechococcus elongatus (str... [more]
FER_SYNEN4.819e-2363.27Ferredoxin-1 OS=Synechococcus elongatus naegeli GN... [more]
FER_SPIMA6.271e-2367.35Ferredoxin OS=Spirulina maxima PE=1 SV=2[more]
FER_CHLFR8.162e-2367.35Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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