EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SYNP4 (Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.241e-21
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G +DQSD SFLDD+Q+EAGY+LTC+ YP S+
Sbjct:   39 PYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASD 87

HSP 2 Score: 50.0618 bits (118), Expect = 4.241e-21
Identity = 24/44 (54.55%), Postives = 29/44 (65.91%), Query Frame = 3 
Query:  237 MAVYKIKLIGPK-GEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI  + G     E  +D+YILD  EE G+DLPYSCRA
Sbjct:    1 MASYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SOLLY (Ferredoxin OS=Solanum lyratum PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.241e-21
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G+VDQSD SFLDD+Q+  G++LTC+ YP SN
Sbjct:   36 PYSCRAGACSSCAGKITAGNVDQSDNSFLDDDQVAEGFVLTCVAYPKSN 84

HSP 2 Score: 52.373 bits (124), Expect = 4.241e-21
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KLI P+G   EF   +D YILD+ EE G DLPYSCRA
Sbjct:    1 ATYKVKLITPEGPV-EFNCPDDVYILDSAEENGHDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_CAPAA (Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.241e-21
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+  G+VDQ+DG+FLDD+QLE G++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSD 84

HSP 2 Score: 52.7582 bits (125), Expect = 4.241e-21
Identity = 27/42 (64.29%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KLI P G   EF+  +D YILD  EEAG DLPYSCRA
Sbjct:    1 ASYKVKLITPDGPI-EFDCPDDVYILDQAEEAGHDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PANGI (Ferredoxin OS=Panax ginseng PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 5.518e-21
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+VSG VD SD SFL+D+ ++AGY+LTC  Y NS+
Sbjct:   37 PYSCRAGSCSSCAGKVVSGKVDNSDNSFLNDDNMDAGYVLTCHAYANSD 85

HSP 2 Score: 56.9954 bits (136), Expect = 5.518e-21
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 3 
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            YK+KL+ P+GE+ EFE  +D YILD  EE G+DLPYSCRA
Sbjct:    4 YKVKLLTPEGEK-EFECPDDVYILDNAEEIGIDLPYSCRA 42
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_COLES (Ferredoxin OS=Colocasia esculenta PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 5.518e-21
Identity = 28/49 (57.14%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+  G VDQSDGSFLDD Q+  G++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKVKVGDVDQSDGSFLDDEQIGEGWVLTCVAYPVSD 84

HSP 2 Score: 57.3806 bits (137), Expect = 5.518e-21
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KL+ P G++ EF+  +D YILD  EE G+DLPYSCRA
Sbjct:    1 ATYKVKLVTPSGQQ-EFQCPDDVYILDQAEEVGIDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_PLEBO (Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.342e-21
Identity = 31/49 (63.27%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+ +G+VDQSD SFLDD+Q++AGY+LTC+ YP S+
Sbjct:   39 PYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSD 87

HSP 2 Score: 47.3654 bits (111), Expect = 9.342e-21
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            M  +K+ LI   +G     E  +D+YILDA EE G+DLPYSCRA
Sbjct:    1 MPSFKVTLINETEGLNTTIEVPDDEYILDAAEEQGIDLPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_ARCLA (Ferredoxin OS=Arctium lappa PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.342e-21
Identity = 30/49 (61.22%), Postives = 41/49 (83.67%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +GSVDQSDGS+LDD+Q+EAG++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSD 84

HSP 2 Score: 48.1358 bits (113), Expect = 9.342e-21
Identity = 27/43 (62.79%), Postives = 32/43 (74.42%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILD-ATEEAGVDLPYSCRA 365
            A YK+ LI P+G++ EFE  +D YILD A EE G DLPYSCRA
Sbjct:    1 ATYKVTLITPEGKQ-EFEVPDDVYILDHAAEEVG-DLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_EUGVI (Ferredoxin OS=Euglena viridis PE=1 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 9.342e-21
Identity = 28/49 (57.14%), Postives = 34/49 (69.39%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+C G +  G+VDQSD SFLDD+Q+  G+ LTC TYP SN
Sbjct:   36 PYSCRAGACSSCTGIVKEGTVDQSDQSFLDDDQMAKGFCLTCTTYPTSN 84

HSP 2 Score: 58.151 bits (139), Expect = 9.342e-21
Identity = 28/42 (66.67%), Postives = 31/42 (73.81%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A Y +KLI P GE    E  EDQYILDA E+AG+DLPYSCRA
Sbjct:    1 ATYSVKLINPDGEV-TIECGEDQYILDAAEDAGIDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.215e-20
Identity = 30/49 (61.22%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ SGSVDQSD SFL+D Q+E G++LTCI YP  +
Sbjct:   36 PYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGD 84

HSP 2 Score: 52.373 bits (124), Expect = 1.215e-20
Identity = 24/42 (57.14%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+ L+ P G +   E  +D+YILDA EE G+DLPYSCRA
Sbjct:    1 ATYKVTLVTPSGSQ-VIECGDDEYILDAAEEKGMDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.581e-20
Identity = 31/49 (63.27%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLV GSVDQSD SFLD+ Q+  G++LTC+ YP S+
Sbjct:   37 PYSCRAGACSTCAGKLVKGSVDQSDQSFLDEEQINNGFILTCVAYPTSD 85

HSP 2 Score: 49.6766 bits (117), Expect = 1.581e-20
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 3 
Query:  243 VYKIKLIGPK-GEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            +YKI+L+  K G +       DQYILDA EE GVDLPYSCRA
Sbjct:    1 MYKIQLVNQKEGVDVTINCPGDQYILDAAEEQGVDLPYSCRA 42
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER_SYNP44.241e-2163.27Ferredoxin OS=Synechococcus sp. (strain PCC 7418) ... [more]
FER_SOLLY4.241e-2159.18Ferredoxin OS=Solanum lyratum PE=1 SV=1[more]
FER_CAPAA4.241e-2157.14Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=... [more]
FER_PANGI5.518e-2157.14Ferredoxin OS=Panax ginseng PE=1 SV=1[more]
FER_COLES5.518e-2157.14Ferredoxin OS=Colocasia esculenta PE=1 SV=1[more]
FER1_PLEBO9.342e-2163.27Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=3 ... [more]
FER_ARCLA9.342e-2161.22Ferredoxin OS=Arctium lappa PE=1 SV=1[more]
FER_EUGVI9.342e-2157.14Ferredoxin OS=Euglena viridis PE=1 SV=1[more]
FER2_SPIOL1.215e-2061.22Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER2_CYACA1.581e-2063.27Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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