EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SCEQU (Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.581e-20
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G+VDQSD SFLDD+Q++ G++LTC+ YP S+
Sbjct:   36 PYSCRAGACSSCAGKVEAGTVDQSDQSFLDDSQMDGGFVLTCVAYPTSD 84

HSP 2 Score: 52.373 bits (124), Expect = 1.581e-20
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+ L  P G++   E  +D YILDA EEAG+DLPYSCRA
Sbjct:    1 ATYKVTLKTPSGDQ-TIECPDDTYILDAAEEAGLDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_SPIOL (Ferredoxin-1, chloroplastic OS=Spinacia oleracea GN=PETF PE=1 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.993e-20
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGKL +GS++Q D SFLDD+Q++ G++LTC  YP S+
Sbjct:   86 PYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSD 134

HSP 2 Score: 58.9214 bits (141), Expect = 1.993e-20
Identity = 31/56 (55.36%), Postives = 38/56 (67.86%), Query Frame = 3 
Query:  201 FGLKC-SPNFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            FGLK  S   + +MA YK+ L+ P G   EF+  +D YILDA EE G+DLPYSCRA
Sbjct:   37 FGLKTGSRGGRMTMAAYKVTLVTPTGNV-EFQCPDDVYILDAAEEEGIDLPYSCRA 91
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.058e-20
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G+VDQ+D SFLDD+QL AGY+LTCI YP+S+
Sbjct:   39 PYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSD 87

HSP 2 Score: 48.521 bits (114), Expect = 2.058e-20
Identity = 25/44 (56.82%), Postives = 30/44 (68.18%), Query Frame = 3 
Query:  237 MAVYKIKLI-GPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YKI L+   +G +  F   ED YILDA EE G++LPYSCRA
Sbjct:    1 MADYKIHLLCEEEGIDVTFNCAEDTYILDAAEEEGIELPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_CHLFU (Ferredoxin OS=Chlorella fusca PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.058e-20
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ SG VDQSD SFLDD Q+  G++LTC+ YP S+
Sbjct:   34 PYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSD 82

HSP 2 Score: 54.299 bits (129), Expect = 2.058e-20
Identity = 27/40 (67.50%), Postives = 29/40 (72.50%), Query Frame = 3 
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            YK+ L  P GEE   E  ED YILDA EEAG+DLPYSCRA
Sbjct:    1 YKVTLKTPSGEE-TIECPEDTYILDAAEEAGLDLPYSCRA 39
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_TOBAC (Ferredoxin OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.677e-20
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSD 84

HSP 2 Score: 51.9878 bits (123), Expect = 2.677e-20
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KLI P+G   EF+  +D YILD  EE G DLPYSCRA
Sbjct:    1 ASYKVKLITPEGAV-EFDCPDDVYILDQAEEMGHDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.483e-20
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +G+VDQ D SFLDD+Q+EAG++LTC+ YP  +
Sbjct:   36 PYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGD 84

HSP 2 Score: 51.9878 bits (123), Expect = 3.483e-20
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+ L+ P G +   +  +D Y+LDA EEAG+DLPYSCRA
Sbjct:    1 ATYKVTLVTPSGTQ-TIDCPDDTYVLDAAEEAGLDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_MAIZE (Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.698e-20
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+VSGSVDQSD S+LDD Q+  G++LTC  YP S+
Sbjct:   88 PYSCRAGSCSSCAGKVVSGSVDQSDQSYLDDGQIADGWVLTCHAYPTSD 136

HSP 2 Score: 53.1434 bits (126), Expect = 5.698e-20
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 3 
Query:  234 SMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            + A Y +KLI P+GE  E +  +D YILD  EE G+DLPYSCRA
Sbjct:   51 AQATYNVKLITPEGEV-ELQVPDDVYILDQAEEDGIDLPYSCRA 93
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_DATME (Ferredoxin OS=Datura metel PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.895e-20
Identity = 26/49 (53.06%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +G+VDQSDG++LDD+Q+  G++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSD 84

HSP 2 Score: 51.6026 bits (122), Expect = 5.895e-20
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KL+ P G   EF+  +D YILD  EE G DLPYSCRA
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDRAEEEGHDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_DATIN (Ferredoxin OS=Datura inoxia PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.895e-20
Identity = 26/49 (53.06%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +G+VDQSDG++LDD+Q+  G++LTC+ YP S+
Sbjct:   36 PYSCRAGSCSSCAGKVTAGTVDQSDGNYLDDDQMAEGFVLTCVAYPQSD 84

HSP 2 Score: 51.6026 bits (122), Expect = 5.895e-20
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KL+ P G   EF+  +D YILD  EE G DLPYSCRA
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDRAEEEGHDLPYSCRA 41
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.895e-20
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ +G V+QSDGSFLDD+Q+E G++LTC+ Y  S+
Sbjct:   36 PYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSD 84

HSP 2 Score: 52.7582 bits (125), Expect = 5.895e-20
Identity = 25/42 (59.52%), Postives = 31/42 (73.81%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+KL+ P+G + EFE  +D YILD  EE G+ LPYSCRA
Sbjct:    1 ASYKVKLVTPEGTQ-EFECPDDVYILDHAEEEGIVLPYSCRA 41
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER_SCEQU1.581e-2057.14Ferredoxin OS=Scenedesmus quadricauda PE=1 SV=1[more]
FER1_SPIOL1.993e-2053.06Ferredoxin-1, chloroplastic OS=Spinacia oleracea G... [more]
FER_PORYE2.058e-2065.31Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER_CHLFU2.058e-2059.18Ferredoxin OS=Chlorella fusca PE=1 SV=1[more]
FER_TOBAC2.677e-2055.10Ferredoxin OS=Nicotiana tabacum PE=1 SV=1[more]
FER1_PHYES3.483e-2055.10Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]
FER1_MAIZE5.698e-2059.18Ferredoxin-1, chloroplastic OS=Zea mays GN=FDX1 PE... [more]
FER_DATME5.895e-2053.06Ferredoxin OS=Datura metel PE=1 SV=1[more]
FER_DATIN5.895e-2053.06Ferredoxin OS=Datura inoxia PE=1 SV=1[more]
FER_MEDSA5.895e-2055.10Ferredoxin OS=Medicago sativa PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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