EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.669e-20
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G+VDQSD SFLDD Q+  GY+LTCI YP S+
Sbjct:   38 PYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESD 86          

HSP 2 Score: 48.9062 bits (115), Expect = 7.669e-20
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 3
Query:  240 AVYKIKLIGPK-GEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YKI L+  + G +  F+  ED YILDA EE G++LPYSCRA
Sbjct:    1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRA 43          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_LEUGL (Ferredoxin OS=Leucaena glauca PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.669e-20
Identity = 29/49 (59.18%), Postives = 36/49 (73.47%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGKLV G +DQSD SFLDD Q+E G++LTC  YP S+
Sbjct:   35 PYSCRAGSCSSCAGKLVEGDLDQSDQSFLDDEQIEEGWVLTCAAYPRSD 83          

HSP 2 Score: 51.2174 bits (121), Expect = 7.669e-20
Identity = 23/40 (57.50%), Postives = 30/40 (75.00%), Query Frame = 3
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            +K+KL+ P G + EFE  +D YILD  EE G++LPYSCRA
Sbjct:    2 FKVKLLTPDGPK-EFECPDDVYILDQAEELGIELPYSCRA 40          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_THAWE (Ferredoxin OS=Thalassiosira weissflogii GN=petF PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 9.978e-20
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G++DQS+ +FLDD+Q+ AG++LTCI YP S+
Sbjct:   39 PYSCRAGACSTCAGKVTEGTIDQSEQTFLDDDQMGAGFVLTCIAYPKSD 87          

HSP 2 Score: 50.447 bits (119), Expect = 9.978e-20
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 3
Query:  237 MAVYKIKLIGPKGEEHEF----EAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ LI    EEH+     +  +D ++LDA EEAG+DLPYSCRA
Sbjct:    1 MATYKVTLIS---EEHDINTTIDCNDDVFVLDAAEEAGIDLPYSCRA 44          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_CHLRE (Ferredoxin, chloroplastic OS=Chlamydomonas reinhardtii GN=PETF PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 2.174e-19
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G+VDQSD SFLDD Q+  G++LTC+ YP S+
Sbjct:   66 PYSCRAGACSSCAGKVAAGTVDQSDQSFLDDAQMGNGFVLTCVAYPTSD 114          

HSP 2 Score: 51.2174 bits (121), Expect = 2.174e-19
Identity = 26/49 (53.06%), Postives = 31/49 (63.27%), Query Frame = 3
Query:  219 PNFQASMAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            P  + S   YK+ L  P G++   E   D YILDA EEAG+DLPYSCRA
Sbjct:   24 PASRMSCMAYKVTLKTPSGDK-TIECPADTYILDAAEEAGLDLPYSCRA 71          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_MARPO (Ferredoxin OS=Marchantia polymorpha PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.197e-19
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G VDQSD SFLDD+Q++ GY+LTCI YP S+
Sbjct:   35 PYSCRAGACSSCAGKVTAGEVDQSDESFLDDDQMDEGYVLTCIAYPTSD 83          

HSP 2 Score: 46.595 bits (109), Expect = 2.197e-19
Identity = 21/40 (52.50%), Postives = 29/40 (72.50%), Query Frame = 3
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            +K+ L  P G+    + ++D+YILDA EEAG+ LPYSCRA
Sbjct:    2 FKVTLNTPTGQS-VIDVEDDEYILDAAEEAGLSLPYSCRA 40          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_DUNSA (Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 2.858e-19
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+ SG+VDQSD SFLDD+Q+++G++LTC+ Y  S+
Sbjct:   35 PYSCRAGSCSSCAGKVESGTVDQSDQSFLDDDQMDSGFVLTCVAYATSD 83          

HSP 2 Score: 50.8322 bits (120), Expect = 2.858e-19
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 3
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            Y + L  P GE+ + E   D YILDA EEAGVDLPYSCRA
Sbjct:    2 YMVTLKTPSGEQ-KVEVSPDSYILDAAEEAGVDLPYSCRA 40          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_PHYAM (Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.858e-19
Identity = 25/49 (51.02%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+C GK+ +G+VDQ D SFLDD+Q+EAG++LTC+ +P  +
Sbjct:   36 PYSCRAGSCSSCTGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAFPKGD 84          

HSP 2 Score: 51.9878 bits (123), Expect = 2.858e-19
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 3
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+ L+ P G +   +  +D Y+LDA EEAG+DLPYSCRA
Sbjct:    1 ATYKVTLVTPSGTQ-TIDCPDDTYVLDAAEEAGLDLPYSCRA 41          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_GLEJA (Ferredoxin OS=Gleichenia japonica PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 3.717e-19
Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYP 486
            P     GACS+C GKL+ G VDQS+ SFLDD+Q+  G++LTC+ YP
Sbjct:   36 PYSCRAGACSSCTGKLLDGRVDQSEQSFLDDDQMAEGFVLTCVAYP 81          

HSP 2 Score: 53.1434 bits (126), Expect = 3.717e-19
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 3
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A++K+K + P GE    E  +D++ILDA EEAG+DLPYSCRA
Sbjct:    1 AIFKVKFLTPDGER-TIEVPDDKFILDAGEEAGLDLPYSCRA 41          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PHYPA (Ferredoxin, chloroplastic OS=Physcomitrella patens GN=PETF PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.676e-19
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAG + +G VDQSD SFLDD+Q++ G++LTC+ YP S+
Sbjct:   86 PYSCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASD 134          

HSP 2 Score: 51.9878 bits (123), Expect = 4.676e-19
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 3
Query:  162 PTSLGSVKGIS*TFGLKC-SPNFQASMAVYKIKLI-GPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            P+S+   K     FGLK  S      MA YK+  + G  G E+  E  +++Y LDA E AG+DLPYSCRA
Sbjct:   26 PSSVSVAKA----FGLKSRSMGRLTCMATYKVTFLDGETGAENVXECSDEEYXLDAAERAGMDLPYSCRA 91          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_APHSA (Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.836e-19
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 1
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGKLVSG     D SFLDD+Q++AGY+LTC+ YP  +
Sbjct:   37 PYSCRAGACSTCAGKLVSGPAPDEDQSFLDDDQIQAGYILTCVAYPTGD 85          

HSP 2 Score: 47.7506 bits (112), Expect = 4.836e-19
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 3
Query:  237 MAVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ L  P G+ +     +D+YILD  EE G+DLPYSCRA
Sbjct:    1 MASYKVTLKTPDGD-NVITVPDDEYILDVAEEEGLDLPYSCRA 42          
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER_PORUM7.669e-2063.27Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV... [more]
FER_LEUGL7.669e-2059.18Ferredoxin OS=Leucaena glauca PE=1 SV=1[more]
FER_THAWE9.978e-2057.14Ferredoxin OS=Thalassiosira weissflogii GN=petF PE... [more]
FER_CHLRE2.174e-1957.14Ferredoxin, chloroplastic OS=Chlamydomonas reinhar... [more]
FER_MARPO2.197e-1961.22Ferredoxin OS=Marchantia polymorpha PE=1 SV=1[more]
FER1_DUNSA2.858e-1955.10Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1[more]
FER1_PHYAM2.858e-1951.02Ferredoxin-1 OS=Phytolacca americana PE=1 SV=1[more]
FER_GLEJA3.717e-1956.52Ferredoxin OS=Gleichenia japonica PE=1 SV=1[more]
FER_PHYPA4.676e-1955.10Ferredoxin, chloroplastic OS=Physcomitrella patens... [more]
FER_APHSA4.836e-1959.18Ferredoxin-1 OS=Aphanothece sacrum PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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