EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER4_ARATH (Probable ferredoxin-4, chloroplastic OS=Arabidopsis thaliana GN=FD4 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 6.072e-19
Identity = 27/46 (58.70%), Postives = 32/46 (69.57%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYP 486
            P     G C TC GKLVSG VDQS GSFL++ Q++ GY+LTCI  P
Sbjct:   88 PYSCRSGTCGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALP 133

HSP 2 Score: 53.5286 bits (127), Expect = 6.072e-19
Identity = 23/39 (58.97%), Postives = 30/39 (76.92%), Query Frame = 3 
Query:  249 KIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            K+KLI P+GEE E E  ED  IL++ E AG++LPYSCR+
Sbjct:   55 KVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRS 93
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_PHYES (Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.064e-18
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +GSV+Q DGSFLD+ Q+EAG++LTC+ YP S+
Sbjct:   37 PYSCRAGACSSCAGKVTAGSVNQEDGSFLDEEQMEAGWVLTCVAYPTSD 85

HSP 2 Score: 44.2838 bits (103), Expect = 1.064e-18
Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+  + P G +       D Y+LDA E+ G+DLPYSCRA
Sbjct:    2 ASYKVTFVTPSGTK-TITCPADTYVLDAAEDTGLDLPYSCRA 42
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_ODOSI (Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.384e-18
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK+  G +DQS+ +FLDD+Q+ AG++LTCI YP S+
Sbjct:   39 PYSCRAGACSTCAGKVTEGDIDQSEQTFLDDDQVGAGFVLTCIAYPKSD 87

HSP 2 Score: 47.3654 bits (111), Expect = 1.384e-18
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 3 
Query:  237 MAVYKIKLIGPKGEEHEFEA----QEDQYILDATEEAGVDLPYSCRA 365
            MA YK+ L+    EEH+ +A     +D ++LDA EE G++LPYSCRA
Sbjct:    1 MATYKVTLLS---EEHDIDATIDCNDDVFLLDAAEEQGIELPYSCRA 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_PHYAM (Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.342e-18
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G+V+Q DGSFL++ Q+EAG++LTC+ YP S+
Sbjct:   37 PYSCRAGACSSCAGKVTAGAVNQEDGSFLEEEQMEAGWVLTCVAYPTSD 85

HSP 2 Score: 45.8246 bits (107), Expect = 2.342e-18
Identity = 21/42 (50.00%), Postives = 27/42 (64.29%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+  + P G  +      D Y+LDA EE+G+DLPYSCRA
Sbjct:    2 ASYKVTFVTPSGT-NTITCPADTYVLDAAEESGLDLPYSCRA 42
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_NOSMU (Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2)

HSP 1 Score: 62.3882 bits (150), Expect = 3.047e-18
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+C G L  G+VDQSD +FLDD+Q+ AG +LTC+ YP SN
Sbjct:   39 PFSCRSGSCSSCNGILKKGTVDQSDQNFLDDDQIAAGNVLTCVAYPTSN 87

HSP 2 Score: 51.2174 bits (121), Expect = 3.047e-18
Identity = 23/44 (52.27%), Postives = 32/44 (72.73%), Query Frame = 3 
Query:  237 MAVYKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            MA YK++L    +G +   E  +D+YILDA EEAG+DLP+SCR+
Sbjct:    1 MATYKVRLFNAAEGLDETIEVPDDEYILDAAEEAGLDLPFSCRS 44
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_BUMFI (Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.963e-18
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACSTCAGK++SG++DQS+ SFLDD+Q+ AG+LLTC+ YP S+
Sbjct:   38 PYSCRAGACSTCAGKVLSGTIDQSEQSFLDDDQMGAGFLLTCVAYPTSD 86

HSP 2 Score: 41.2022 bits (95), Expect = 3.963e-18
Identity = 19/41 (46.34%), Postives = 26/41 (63.41%), Query Frame = 3 
Query:  246 YKIKLIGP-KGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            Y + L+   K      +  +DQ+ILDA EE G++LPYSCRA
Sbjct:    3 YSVTLVNEEKNINAVIKCPDDQFILDAAEEQGIELPYSCRA 43
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_BRYMA (Ferredoxin OS=Bryopsis maxima PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.963e-18
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CSTCAGK+  G+VDQS+ +FLDD+Q+E GY+LTC+ YP S+
Sbjct:   37 PFSCRSGSCSTCAGKIEGGTVDQSEQTFLDDDQMEEGYVLTCVAYPTSD 85

HSP 2 Score: 44.2838 bits (103), Expect = 3.963e-18
Identity = 19/42 (45.24%), Postives = 26/42 (61.90%), Query Frame = 3 
Query:  240 AVYKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            A YK+ L    G E   +  ED +ILD  EE G+D+P+SCR+
Sbjct:    1 ASYKVTLKLDDGSEAVIDCDEDSFILDVAEEEGIDIPFSCRS 42
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_DUNSA (Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 8.718e-18
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+CAGK+ +G++DQSD SFLDD+Q   G++LTC+ Y  S+
Sbjct:   35 PYSCRAGACSSCAGKVEAGTIDQSDQSFLDDDQQGRGFVLTCVAYATSD 83

HSP 2 Score: 50.0618 bits (118), Expect = 8.718e-18
Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 3 
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            YK+ L  P G++   E   D YILDA EEAG+DLPYSCRA
Sbjct:    2 YKVTLKTPSGDQ-TIEVSPDAYILDAAEEAGLDLPYSCRA 40
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER1_EQUTE (Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.134e-17
Identity = 31/49 (63.27%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     GACS+C GK+VSGSVDQS+GSFLDD Q+E G++LTCI  P S+
Sbjct:   35 PFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIPESD 83

HSP 2 Score: 40.4318 bits (93), Expect = 1.134e-17
Identity = 22/40 (55.00%), Postives = 24/40 (60.00%), Query Frame = 3 
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            YK  L  P GE    +  E   ILDA EEAG DLP+SCRA
Sbjct:    2 YKTVLKTPSGE-FTLDVPEGTTILDAAEEAGYDLPFSCRA 40
[Close]
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PERBI (Ferredoxin OS=Peridinium bipes PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.918e-17
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 1 
Query:  349 PIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            P     G+CS+CAGK+++GS+DQSD +FLDD+Q   GY LTC+TYP S+
Sbjct:   34 PYSCRAGSCSSCAGKVLTGSIDQSDQAFLDDDQGGDGYCLTCVTYPTSD 82

HSP 2 Score: 44.2838 bits (103), Expect = 1.918e-17
Identity = 21/40 (52.50%), Postives = 27/40 (67.50%), Query Frame = 3 
Query:  246 YKIKLIGPKGEEHEFEAQEDQYILDATEEAGVDLPYSCRA 365
            +K+ L  P G++  FE   D YILD  EE G++LPYSCRA
Sbjct:    1 FKVTLDTPDGKK-SFECPGDSYILDKAEEEGLELPYSCRA 39
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER4_ARATH6.072e-1958.70Probable ferredoxin-4, chloroplastic OS=Arabidopsi... [more]
FER2_PHYES1.064e-1859.18Ferredoxin-2 OS=Phytolacca esculenta PE=1 SV=1[more]
FER_ODOSI1.384e-1857.14Ferredoxin OS=Odontella sinensis GN=petF PE=3 SV=2[more]
FER2_PHYAM2.342e-1855.10Ferredoxin-2 OS=Phytolacca americana PE=1 SV=1[more]
FER2_NOSMU3.047e-1855.10Ferredoxin-2 OS=Nostoc muscorum PE=1 SV=2[more]
FER_BUMFI3.963e-1861.22Ferredoxin OS=Bumilleriopsis filiformis PE=1 SV=1[more]
FER_BRYMA3.963e-1857.14Ferredoxin OS=Bryopsis maxima PE=1 SV=1[more]
FER2_DUNSA8.718e-1853.06Ferredoxin-2 OS=Dunaliella salina PE=1 SV=1[more]
FER1_EQUTE1.134e-1763.27Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1[more]
FER_PERBI1.918e-1757.14Ferredoxin OS=Peridinium bipes PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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