EY710424

Overview
NameEY710424
Unique NameEY710424
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1026
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_HORVU (Ferredoxin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.396e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGKLVSG +DQSD SFLDD+Q+E G++LTC  YP S+
Sbjct:   27 QAEEEGIDLPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.062e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_DATAR (Ferredoxin OS=Datura arborea PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.062e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FERB_ALOMA (Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.305e-11
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDGSFLDD+Q+  G++LTC+ YP S+
Sbjct:   28 QAEEEGIDLPYSCRAGSCSSCAGKVKNGNVDQSDGSFLDDDQIGEGWVLTCVAYPTSD 85          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FERA_ALOMA (Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 5.305e-11
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+  G VDQSDGSFLDD Q+E G++LTC+ +P S+
Sbjct:   27 QAEEEGIDLPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_SCOJA (Ferredoxin OS=Scopolia japonica PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11
Identity = 28/55 (50.91%), Postives = 41/55 (74.55%), Query Frame = 1
Query:  331 KQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            +Q    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   30 EQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER_ATRBE (Ferredoxin OS=Atropa belladonna PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSD 84          
BLAST of EY710424 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.929e-11
Identity = 28/58 (48.28%), Postives = 42/58 (72.41%), Query Frame = 1
Query:  322 QLRKQESTCPIPAALGACSTCAGKLVSGSVDQSDGSFLDDNQLEAGYLLTCITYPNSN 495
            Q  ++    P     G+CS+CAGK+ +G+VDQSDG+FLDD+Q+  G++LTC+ YP S+
Sbjct:   27 QAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSD 84          
The following BLAST results are available for this feature:
BLAST of EY710424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
FER_HORVU1.396e-1153.45Ferredoxin OS=Hordeum vulgare PE=1 SV=1[more]
FER_SOLNI4.062e-1148.28Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_DATAR4.062e-1148.28Ferredoxin OS=Datura arborea PE=1 SV=1[more]
FERB_ALOMA5.305e-1150.00Ferredoxin-B OS=Alocasia macrorrhiza PE=1 SV=1[more]
FERA_ALOMA5.305e-1150.00Ferredoxin-A OS=Alocasia macrorrhiza PE=1 SV=1[more]
FER_SCOJA6.929e-1148.28Ferredoxin OS=Scopolia japonica PE=1 SV=1[more]
FER_PHYAF6.929e-1150.91Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_LYCCN6.929e-1148.28Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER_ATRBE6.929e-1148.28Ferredoxin OS=Atropa belladonna PE=1 SV=1[more]
FER2_HYONI6.929e-1148.28Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-115-A09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710424 ID=EY710424; Name=EY710424; organism=Citrus sinensis; type=EST; length=1026bp
ATTTCACTTGACCGCCACCCATTAACCCACTCGCCACCTCGCGCGCTCCG
CCGCTCGATCTCTTGCTTTTCTGGGTAAAGATGTCGACTGTGACACTTAG
CGCCCCGTGCATGGTTAAAGCTGCACCCAGAAATCAACTATCAAGGAACT
TAATCAAGAGCCCAACCTCACTTGGATCTGTTAAGGGCATCTCCTAGACC
TTTGGCCTGAAATGCTCTCCCAATTTCCAAGCATCAATGGCTGTCTACAA
GATTAAGCTGATTGGACCTAAGGGTGAAGAGCATGAGTTTGAGGCCCAAG
AAGACCAGTACATCCTCGATGCAACTGAGGAAGCAGGAGTCGACCTGCCC
TATTCCTGCCGCGCTTGGTGCTTGCTCGACGTGTGCTGGGAAATTGGTGT
CTGGTTCAGTTGACCAGTCAGATGGTTCCTTCCTCGATGACAATCAATTG
GAGGCTGGTTATCTGCTGACTTGCATTACATACCCAAATTCAAATTGGAG
TGATTCTTTCTCAAAAGGAATAAGAGCTTTGCTTAATGCCTTTGCTGACA
ATTGGTTTTAAGGTATTTCAAATATAAATCGGGGATTCAGTGCCTTAATA
AGGTTAATAAGGTTTTCACTGGGGCCTTAAATATTTTTTTAAAATTCAAC
CTTTGTATCAGGGGGCAAGGAAATCAGTAAATTTTTTCATTTATATAAAC
AAATAACAGAGCATTTTGGGAATTTAAAAAAATAAAATAAAAGGGGCAGC
CCCTACCTATGAGGAATACCCAGCTATAAATAAAACATAGGCTAGAGGAT
AGAACTGTAGTCTCCTTTGATAGGGGTGTTCAATAAAAAAATTGAAATCT
AGTGGGTGTCATTGGTTTTTTTTAGAAATGTGTTGGGAGATGGTGGGAAA
ACAACCATCAGTATTGTTACCCTCAACATTTTTAATTTTCCCCTTATATC
TAGAATAAACTCCTCTCAACTCTTTTTTCACCTACTTATTGTAGGGTGAT
AATATTAAGTTAAATTAAGAAAAAGA
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