EY685266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_XANC8 (Thymidylate synthase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=thyA PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.104e-41 Identity = 77/142 (54.23%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+V+SAWN +L MAL PCH QFY+ +G+LSCQ+YQRS D+ LGVPFNIASYALLT M+A L GDF+H +GDAH+Y NH EQL + P+P P L++NP+ D+ +F ED + GYDPH I+ +AV Sbjct: 123 PDSRRLVISAWNVGELPQMALMPCHSLFQFYVVDGKLSCQLYQRSGDIFLGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRPLPTLRLNPDVTDLFAFRFEDIAIDGYDPHPAIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_XANAC (Thymidylate synthase OS=Xanthomonas axonopodis pv. citri GN=thyA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41 Identity = 78/142 (54.93%), Postives = 99/142 (69.72%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+V+SAWN +L MAL PCH QFY+ NG+LSCQ+YQRS D+ LGVPFNIASYALLT M+A L GDF+H +GDAH+Y NH EQL + P+ P L++NPE D+ +F ED + GYDPH I+ +AV Sbjct: 123 PDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFEQAREQLTRTPRALPSLRLNPEVTDLFAFRFEDIAIEGYDPHPAIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_LACS1 (Thymidylate synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=thyA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR++++AWNP D+ L ALPPCH QFY+ +G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA L G+F+H +GDAH+Y NH+ + EQLQ+ P P L +NPEKK+I F ED K+ Y H I+ +AV Sbjct: 177 PDSRRMIVTAWNPEDVPLSALPPCHTLFQFYVNDGKLSCQLYQRSADVFLGVPFNIASYALLTHMIARETGLEVGEFVHTLGDAHIYLNHLDQVNEQLQRKPNDAPTLWLNPEKKNIMDFEMEDIKVKNYHSHSAIKAPVAV 318
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_HYPNA (Thymidylate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=thyA PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41 Identity = 76/142 (53.52%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RR+++SAWNP+D+ MALPPCH QF + +G+L+CQ+YQRSAD+ LGVPFNIASYALLT M+A L PG+F+H GDAH+Y NH+ E QL + P+ P + +NP+K D+ + EDF++ GY PH I+ +AV Sbjct: 123 PNSRRLIVSAWNPADVNDMALPPCHCLFQFNVMDGKLNCQLYQRSADVFLGVPFNIASYALLTMMMARATGLQPGEFVHTFGDAHLYLNHLEQAELQLTREPRDLPTIHMNPDKADLFGWEYEDFRVDGYAPHPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: DRTS_LEIAM (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 4.054e-41 Identity = 78/144 (54.17%), Postives = 103/144 (71.53%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYM--ANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PNDRR++ +AWNP L MALPPCH+ AQFY+ ELSC +YQRS DMGLGVPFNIASYALLT +IA L PG+ +H +GDAHVYR+H+ L+ QL+++P FP L E++ ++ + D ++I Y PH I+M+MAV Sbjct: 377 PNDRRLLFTAWNPCALHKMALPPCHLLAQFYVNTEKSELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYRSHIDALKAQLERVPHAFPTLVFKEERQFLEDYELMDMEVIDYVPHPPIKMEMAV 520
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_LACBA (Thymidylate synthase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=thyA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.294e-41 Identity = 77/143 (53.85%), Postives = 102/143 (71.33%), Query Frame = 3 Query: 15 YPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 +P+ RR+++SAWNP+D+ MALPPCH QFY+ +G+LSCQ+YQRSAD+ LGVPFNIASYALLT +IA L GDF+H +GDAH+Y NHV ++ QL + P P L +NP+K I + D K+ GYDP I+ +AV Sbjct: 174 HPDSRRMIVSAWNPADVPSMALPPCHTLFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTSLIAKEVGLEVGDFVHTLGDAHIYSNHVEQIKTQLARTPHAAPQLWLNPDKSSIFDYEMSDIKVTGYDPEPAIKAPVAV 316
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BARQU (Thymidylate synthase OS=Bartonella quintana GN=thyA PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.294e-41 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+ ++ MALPPCH F QFY+A+ +LSCQ+YQRSAD+ LGVPFNIASYALLT MIA V L GDFIH +GDAH+Y NH QL ++P P + INP D+ SF EDF+L+ Y+ I+ +AV Sbjct: 123 PDSRRLIVSAWNPALIEEMALPPCHCFFQFYVADDKLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVSGLKAGDFIHTLGDAHLYSNHFEQARYQLSRIPNALPSMLINPSVTDLFSFKFEDFELLNYEAQPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_LACRD (Thymidylate synthase OS=Lactobacillus reuteri (strain DSM 20016) GN=thyA PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41 Identity = 79/142 (55.63%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP D+ MALPPCH QFY+ +G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIAH C L PG+F+H +GDAH+Y NH+ ++EQL + P P L + E K ID + D KL GY I+ +AV Sbjct: 179 PDSRRMIVSAWNPEDVPSMALPPCHTMFQFYVNDGKLSCQLYQRSADIFLGVPFNIASYALLTHMIAHQCGLEPGEFVHTLGDAHIYLNHLDQVKEQLTRTPHEAPKLILPAEPKPIDQYEMTDIKLEGYTHEPAIKAPVAV 320
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_AGRT5 (Thymidylate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=thyA PE=3 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41 Identity = 76/142 (53.52%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RR ++SAWNP+ + MALPPCH QFY+++G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PGDF+H +GDAH+Y NH + Q+ + PK P +++NP+ K++ F EDF L Y+ I+ +AV Sbjct: 123 PNSRRHIVSAWNPALVDEMALPPCHCLFQFYVSDGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVVGLKPGDFVHTLGDAHIYANHFEQAQLQMTRTPKALPTMRLNPDVKNLFGFKFEDFTLENYEADSSIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_XANOR (Thymidylate synthase OS=Xanthomonas oryzae pv. oryzae GN=thyA PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.540e-40 Identity = 77/142 (54.23%), Postives = 99/142 (69.72%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+V+SAWN +L MAL PCH QFY+ NG+LSCQ+YQRS D+ LGVPFNIASYALLT M+A L GDF+H +GDAH+Y NH +QL + P+ P L++NPE D+ +F ED + GYDPH I+ +AV Sbjct: 123 PDSRRLVISAWNVGELPQMALMPCHSLFQFYVVNGKLSCQLYQRSGDIFLGVPFNIASYALLTHMVAQATGLGVGDFVHTLGDAHLYSNHFDQARKQLTRTPRALPTLRLNPEVTDLFAFRFEDIAIEGYDPHPAIKAPVAV 264 The following BLAST results are available for this feature:
BLAST of EY685266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 405
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685266 ID=EY685266; Name=EY685266; organism=Citrus sinensis; type=EST; length=900bpback to top |