EY685266

Overview
NameEY685266
Unique NameEY685266
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACCR (Thymidylate synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=thyA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP D+  MALPPCH   QFY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L  G+F+H IGDAH+Y NH   +E+QL + P+PFP L +NP+ K +  F  ED  + GYDPH  I+  +AV
Sbjct:  177 PDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACC1 (Thymidylate synthase OS=Bacillus cereus (strain ATCC 10987) GN=thyA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP D+  MALPPCH   QFY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L  G+F+H IGDAH+Y NH   +E+QL + P+PFP L +NP+ K +  F  ED  + GYDPH  I+  +AV
Sbjct:  177 PDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACAN (Thymidylate synthase OS=Bacillus anthracis GN=thyA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP D+  MALPPCH   QFY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L  G+F+H IGDAH+Y NH   +E+QL + P+PFP L +NP+ K +  F  ED  + GYDPH  I+  +AV
Sbjct:  177 PDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACAH (Thymidylate synthase OS=Bacillus thuringiensis (strain Al Hakam) GN=thyA PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 80/142 (56.34%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP D+  MALPPCH   QFY+A+G+LSCQ+YQRS D+ LG+PFNIASY+LLT +IAH C L  G+F+H IGDAH+Y NH   +E+QL + P+PFP L +NP+ K +  F  ED  + GYDPH  I+  +AV
Sbjct:  177 PDSRRLIVSAWNPEDVPSMALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLEVGEFVHTIGDAHIYTNHFEQVEKQLAREPRPFPKLTLNPDVKSVFDFEMEDLTIEGYDPHPAIKAPVAV 318          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: DRTS_TRYCR (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Trypanosoma cruzi PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.543e-45
Identity = 82/142 (57.75%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+DRR++ +AWNPS L  MALPPCH+ AQFY++NGELSC +YQRS DMGLGVPFNIASYALLT +IA    L PG+ +H +GDAHVY NHV P  EQL+++P+ FP L    E++ ++ +   D ++I Y P+  I MKMAV
Sbjct:  380 PDDRRMLFTAWNPSALPRMALPPCHLLAQFYVSNGELSCMLYQRSCDMGLGVPFNIASYALLTILIAKATGLRPGELVHTLGDAHVYSNHVEPCNEQLKRVPRAFPYLVFRREREFLEDYEEGDMEVIDYAPYPPISMKMAV 521          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: DRTS_PLAFK (Bifunctional dihydrofolate reductase-thymidylate synthase OS=Plasmodium falciparum (isolate K1 / Thailand) PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 4.627e-45
Identity = 83/141 (58.87%), Postives = 104/141 (73.76%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMA 440
            P  RRI+L AWN  DL  MALPPCH+  QFY+ +G+LSC MYQRS D+GLGVPFNIASY++ T MIA VC+L P  FIHV+G+AHVY NH+  L+ QL ++P PFP LK+NP+ K+I+ F   DF +  Y  H+KI M MA
Sbjct:  467 PTSRRILLCAWNVKDLDQMALPPCHILCQFYVFDGKLSCIMYQRSCDLGLGVPFNIASYSIFTHMIAQVCNLQPAQFIHVLGNAHVYNNHIDSLKIQLNRIPYPFPTLKLNPDIKNIEDFTISDFTIQNYVHHEKISMDMA 607          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_THIDA (Thymidylate synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=thyA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.044e-45
Identity = 85/142 (59.86%), Postives = 104/142 (73.24%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RRI++SAWN +DL  MAL PCH F QFY+A G LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V  L PGDF+H +GDAH+Y NH+    EQL + P+P P + +NP+  DI  F  EDF L GYDPH  I+  +AV
Sbjct:  123 PDSRRIIVSAWNVADLDRMALAPCHAFFQFYVAEGRLSCQLYQRSADIFLGVPFNIASYALLTLMMAQVTGLKPGDFVHTLGDAHLYVNHLEQAREQLSREPRPLPTMTLNPDVTDIFGFRFEDFTLGGYDPHPAIKAPVAV 264          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_PSEMY (Thymidylate synthase OS=Pseudomonas mendocina (strain ymp) GN=thyA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.044e-45
Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP+ ++ MALPPCH   QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A VCDL PG+FI   GD H+Y NH+   + QL + P P P +K+NPE KD+ +F  EDF+L+GY+ H  I+  +AV
Sbjct:  123 PDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVCDLQPGEFIWTGGDCHLYANHIEQADLQLTRQPLPLPTMKLNPEVKDLLAFRFEDFELVGYEAHPHIKAPVAV 264          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_EXISA (Thymidylate synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=thyA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.044e-45
Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR+++SAWNP  L+ MALPPCH+  QFY+A+G+LSCQ+YQRSAD  LGVPFNIASYALLT M+AHV  L  GDF+H +GDAH+Y NH+  +E QL + P+P P L I  +   I+SF  EDF+++GYDPH  I+ +++V
Sbjct:  123 PDSRRLIVSAWNPGQLEEMALPPCHLLFQFYVADGKLSCQLYQRSADTFLGVPFNIASYALLTHMVAHVTGLEVGDFVHTLGDAHIYHNHLEQVELQLSRDPRPLPKLNIVRDVSSIESFRFEDFEILGYDPHPHIKGEVSV 264          
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BRASB (Thymidylate synthase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=thyA PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 6.044e-45
Identity = 81/142 (57.04%), Postives = 106/142 (74.65%), Query Frame = 3
Query:   18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443
            P+ RR++++AWNP+D++ MALPPCH   QFY+ NG+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V  L PG+F+H  GD H+Y NHV     QL + P+  P + +NP+ KDI +F  EDF L GYDPH  I+ ++AV
Sbjct:  123 PDSRRLIVTAWNPADVEKMALPPCHCLFQFYVVNGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKPGEFVHSFGDVHLYSNHVEQARLQLTRAPRSLPTMTLNPDVKDIFAFRYEDFALAGYDPHPHIKAEVAV 264          
The following BLAST results are available for this feature:
BLAST of EY685266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 405
Match NameE-valueIdentityDescription
TYSY_BACCR3.543e-4556.34Thymidylate synthase OS=Bacillus cereus (strain AT... [more]
TYSY_BACC13.543e-4556.34Thymidylate synthase OS=Bacillus cereus (strain AT... [more]
TYSY_BACAN3.543e-4556.34Thymidylate synthase OS=Bacillus anthracis GN=thyA... [more]
TYSY_BACAH3.543e-4556.34Thymidylate synthase OS=Bacillus thuringiensis (st... [more]
DRTS_TRYCR3.543e-4557.75Bifunctional dihydrofolate reductase-thymidylate s... [more]
DRTS_PLAFK4.627e-4558.87Bifunctional dihydrofolate reductase-thymidylate s... [more]
TYSY_THIDA6.044e-4559.86Thymidylate synthase OS=Thiobacillus denitrificans... [more]
TYSY_PSEMY6.044e-4557.75Thymidylate synthase OS=Pseudomonas mendocina (str... [more]
TYSY_EXISA6.044e-4557.75Thymidylate synthase OS=Exiguobacterium sp. (strai... [more]
TYSY_BRASB6.044e-4557.04Thymidylate synthase OS=Bradyrhizobium sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685266 ID=EY685266; Name=EY685266; organism=Citrus sinensis; type=EST; length=900bp
CCACGCGTCCGGAATATCCAAATGATCGGCGGATTGTACTCTCGGCTTGG
AATCCTTCTGATCTCAAATTGATGGCGCTTCCACCTTGCCACATGTTTGC
TCAGTTCTATATGGCTAATGGGGAGTTATCATGTCAAATGTATCAGCGCT
CTGCTGATATGGGCCTGGGTGTGCCGTTTAACATTGCTTCATATGCCCTC
TTGACATGCATGATTGCTCATGTTTGTGATCTTGCTCCTGGCGATTTCAT
TCATGTCATTGGTGATGCTCATGTTTATCGCAATCATGTCAGGCCCCTGG
AGGAACAACTTCAGAAACTGCCAAAGCCTTTTCCAATTTTGAAGATCAAT
CCTGAGAAGAAAGATATAGATTCTTTTGTAGCAGAGGATTTCAAACTTAT
AGGTTATGATCCACACCAGAAAATAGAAATGAAAATGGCGGTATAGATCT
CTCTTATAGGTTCAGTAACTCACAGACTCTGGTCCCTCCTAGGCAATAAT
TGCCAAGTTTTGAGGCACCGCTACTGGAGGCATGTATTGACGCAGAGTTT
TATACAAATAGCCAATAAGAATCTGATTGTTGGATAAACTTTTAAATAGT
GCCTATGTAGTAAGCGGGAATCCTTTAGTCCACAAGAGTCGGTGGTTCTA
AGGTGATTTAGGATGTTTGTATTTTCTTGCTTTTCACCTTTCCTTTTCCC
TTGTTTACTGAAAACTATCAAAGTATGTACTTCTGCTCAAAGTCTCAAAT
GCTCTTTTTGAAAAAGATTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAGGGGGGCCGCCCTAAAGGAACCAAGTTTCCTACCCCGT
GGCTTGGGAACCAAAAATTCTTTCAAAAAGGGGCCCTAAATTTCAATTCC
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