EY685266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_RHIL3 (Thymidylate synthase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=thyA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.917e-44 Identity = 81/142 (57.04%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RR ++SAWNP+++ MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNI+SYALLT M+A V L PGDF+H +GDAH+Y NH + QL + PKP P ++I P+ KDI F +DF+LIGY+ I+ +AV Sbjct: 123 PNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNISSYALLTMMVAQVVGLKPGDFVHTLGDAHLYHNHFDQAKLQLARRPKPLPFMRIKPDVKDIFGFTFDDFELIGYEADASIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BREBN (Thymidylate synthase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=thyA PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.917e-44 Identity = 81/142 (57.04%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP++L MALPPCH+ QFY+ANG+LSCQ+YQRS D LGVPFNIASYALLT M+AHV L GDF+H IGDAH+Y NH+ ++ QL + PKP P L +NP+ I F ED +++GY+ H I+ ++AV Sbjct: 123 PDSRRLIVSAWNPAELDKMALPPCHLLFQFYVANGKLSCQLYQRSGDTFLGVPFNIASYALLTHMVAHVTGLEVGDFVHTIGDAHLYLNHIEQVKLQLTREPKPLPKLVLNPDVTSIFDFKYEDIEIVGYESHPHIKGEVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_ASCSU (Thymidylate synthase OS=Ascaris suum PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.917e-44 Identity = 87/142 (61.27%), Postives = 100/142 (70.42%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RRI+L+AWN DL MALPPCH AQF + NGELSCQ+YQRS DMGLGVPFN+ASY LLT MIAHVC L G HV+GDAHVY NH+ L+EQL + P+PFP + ID F AE L GY+P I+M MAV Sbjct: 153 PNSRRIILNAWNVKDLHQMALPPCHTLAQFAVKNGELSCQLYQRSGDMGLGVPFNLASYGLLTHMIAHVCALKTGFLHHVLGDAHVYLNHIDALKEQLSRDPRPFPTVHFEGRIDSIDDFTAESIILNGYNPMAPIKMPMAV 294
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BARHE (Thymidylate synthase OS=Bartonella henselae GN=thyA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.116e-44 Identity = 81/142 (57.04%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+ +K MALPPCH F QFY+A+G+LSCQ+YQRSAD+ LG+PFNIASYALLT MIA V L GDFIH +GDAH+Y NH + QL ++P P ++INP D+ SF EDF+L+ YD I+ +AV Sbjct: 123 PDSRRLIVSAWNPASIKEMALPPCHCFFQFYVADGKLSCQLYQRSADIFLGIPFNIASYALLTMMIAQVSGLKVGDFIHTLGDAHLYSNHFEQAQHQLSRIPNALPFMRINPAVTDLFSFKFEDFELLNYDAQPHIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACHD (Thymidylate synthase OS=Bacillus halodurans GN=thyA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.116e-44 Identity = 77/142 (54.23%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWN ++++ MAL PCH QFY+ +G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA VCDL G+F+H GDAH+Y NH+ ++ QL + P+P P +++NPE + + F +DF+L+GYDPH I+ +++V Sbjct: 123 PDSRRLIVSAWNAAEIEDMALAPCHCLFQFYVQDGKLSCQLYQRSADIFLGVPFNIASYALLTKMIAQVCDLEEGEFVHTFGDAHIYLNHIEQVKLQLTREPRPLPEMRLNPEVRSLFDFTFDDFELVGYDPHPHIKGEVSV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BACFN (Thymidylate synthase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=thyA PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 5.116e-44 Identity = 85/142 (59.86%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RRI++SAWN DL M LPPCH F QFY+ANG LS Q+YQRSAD+ LGVPFNIASYALL M+A V L GDFIH +GDAH+Y NH+ ++ QL + P+P P +KINP+ K+I F EDF+L+ YDPH I K+AV Sbjct: 123 PDSRRIIVSAWNVGDLDHMNLPPCHAFFQFYVANGRLSLQLYQRSADIFLGVPFNIASYALLLQMMAQVTGLQAGDFIHTLGDAHIYLNHLEQVKLQLSREPRPLPQMKINPDVKNIFDFQFEDFELVNYDPHPHIAGKVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_NITHX (Thymidylate synthase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=thyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.682e-44 Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+D+ MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PGDF+H +GDAH+Y NH+ QL + + P + INPE K I +F EDFKL YDPH I+ ++AV Sbjct: 123 PDSRRLIVSAWNPADVDKMALPPCHCLFQFYVADGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKPGDFVHSLGDAHLYLNHLDQARLQLTRPTRSLPTMTINPEVKSIFAFRYEDFKLENYDPHPHIKAEVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_AZOSB (Thymidylate synthase OS=Azoarcus sp. (strain BH72) GN=thyA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.682e-44 Identity = 83/142 (58.45%), Postives = 104/142 (73.24%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR ++SAWNP ++ MALPPCH QFY+A G LSCQ+YQRSAD+ LGVPFNIASYALLT M+A VCDL PGDF+ GD H+Y NH++ EEQLQ+ P P P + +NPE +D+ +F EDF L GY H I+ +AV Sbjct: 123 PDSRRHIVSAWNPGEVGSMALPPCHALFQFYVAGGRLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVCDLEPGDFVWTGGDCHLYLNHLQQAEEQLQRTPYPLPRMILNPEVRDLFAFRFEDFTLEGYTAHPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_RHOPS (Thymidylate synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=thyA PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.727e-44 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR++++AWNP+D+ MALPPCH QFY+A G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA V L PG+FIH +GDAH+Y NH+ QL + P+ P + I+P KD+ F EDF L GYDPH I+ ++AV Sbjct: 123 PDSRRLIVTAWNPADVDRMALPPCHCLFQFYVAGGKLSCQLYQRSADVFLGVPFNIASYALLTMMIAQVTGLKPGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPEMVIDPAVKDVFGFRYEDFTLQGYDPHPHIKAEVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_LACCA (Thymidylate synthase OS=Lactobacillus casei GN=thyA PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 8.727e-44 Identity = 80/143 (55.94%), Postives = 107/143 (74.83%), Query Frame = 3 Query: 15 YPNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 +P RR+++SAWNP D+ MALPPCH QFY+ +G+LS Q+YQRSAD+ LGVPFNIASYALLT ++AH C L G+FIH GDAH+Y NH+ ++EQL + P+P P L++NP+K DI F +D KL+ YDP+ I+ +AV Sbjct: 174 HPYSRRLIVSAWNPEDVPTMALPPCHTLYQFYVNDGKLSLQLYQRSADIFLGVPFNIASYALLTHLVAHECGLEVGEFIHTFGDAHLYVNHLDQIKEQLSRTPRPAPTLQLNPDKHDIFDFDMKDIKLLNYDPYPAIKAPVAV 316 The following BLAST results are available for this feature:
BLAST of EY685266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 405
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685266 ID=EY685266; Name=EY685266; organism=Citrus sinensis; type=EST; length=900bpback to top |