EY685266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_DEIDV (Thymidylate synthase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=thyA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 5.657e-43 Identity = 78/142 (54.93%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWN +++ MALPPCH F QFY+A+G LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+FI GD H+Y NH+ +QL + P+ P++++NP+ +++D F EDF L GYDPH I+ +AV Sbjct: 123 PDSRRLIVSAWNVGEIEQMALPPCHAFFQFYVADGRLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVTGLKPGEFIWTGGDCHLYTNHLEQARKQLTREPRTLPVMRLNPDVRELDGFRFEDFTLEGYDPHPGIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_AGRVS (Thymidylate synthase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=thyA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 7.388e-43 Identity = 81/142 (57.04%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RR ++SAWNP+++ MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L GDFIH +GDAH+Y NH QL + PKP P+++INP+ KD+ F EDF L Y I+ +AV Sbjct: 123 PNSRRHIVSAWNPAEVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVTGLKAGDFIHTLGDAHLYANHFEQARLQLTRQPKPLPVMRINPDVKDVFGFAFEDFSLENYSADPVIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_OCHA4 (Thymidylate synthase OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=thyA PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.649e-43 Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 PN RR+++SAWNP+ + MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT MIA V L PG+FIH +GDAH+Y NH QL ++PK P + INP+ KD+ +F EDF+L GY+ I+ +AV Sbjct: 123 PNSRRLIVSAWNPALVDEMALPPCHCLFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVAGLKPGEFIHTLGDAHIYANHFDQARLQLTRIPKKLPTMWINPDVKDLFAFRFEDFQLEGYEADPTIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_CRYNE (Thymidylate synthase OS=Cryptococcus neoformans GN=TMP1 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 9.649e-43 Identity = 90/153 (58.82%), Postives = 108/153 (70.59%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMA---------NGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKK---DIDSFVAEDFKLIGYDPHQKIEMKMA 440 P DRRI+LSAWNP DL LMALPPCHMF QF+++ +LSC MYQRS D+GLGVPFNIASYALLT MIA + D P +FI +GDAHVYR+HV PL+ QL++ P+ FP LK K+ DID F EDF + GY P KI+MKM+ Sbjct: 164 PTDRRIILSAWNPKDLPLMALPPCHMFCQFFVSLPPADSPGSKPKLSCLMYQRSCDLGLGVPFNIASYALLTHMIALITDTEPHEFILQMGDAHVYRDHVEPLKTQLEREPRDFPKLKWARSKEEIGDIDGFKVEDFVVEGYKPWGKIDMKMS 316
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_PARL1 (Thymidylate synthase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=thyA PE=3 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.260e-42 Identity = 79/142 (55.63%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWN +D+ MALPPCH QFY+A G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+FIH GDAH+Y NH+ ++QL + PK P++ INP+ K + F +DF L GY+ H I +AV Sbjct: 123 PDSRRLIVSAWNVADVDSMALPPCHCLFQFYVAEGKLSCQLYQRSADIFLGVPFNIASYALLTMMVAQVTGLKPGEFIHTFGDAHLYLNHLEQADKQLAREPKKLPVMHINPDVKSLFDFTYDDFTLEGYEAHPHISAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_PSEAE (Thymidylate synthase OS=Pseudomonas aeruginosa GN=thyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.149e-42 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+ + MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+FI GD H+Y NH+ + QL + P P P +K+NPE KD+ F EDF+L+GY+ H I+ +AV Sbjct: 123 PDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_PSEAB (Thymidylate synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=thyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.149e-42 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+ + MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+FI GD H+Y NH+ + QL + P P P +K+NPE KD+ F EDF+L+GY+ H I+ +AV Sbjct: 123 PDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_PSEA8 (Thymidylate synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=thyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.149e-42 Identity = 80/142 (56.34%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++SAWNP+ + MALPPCH QFY+A+G+LSCQ+YQRSAD+ LGVPFNIASYALLT M+A V L PG+FI GD H+Y NH+ + QL + P P P +K+NPE KD+ F EDF+L+GY+ H I+ +AV Sbjct: 123 PDSRRLIVSAWNPALIDEMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVAGLQPGEFIWTGGDCHLYANHLEQADLQLTREPLPLPSMKLNPEVKDLFDFRFEDFELVGYEAHPHIKAPVAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_BRUC2 (Thymidylate synthase OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=thyA PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 2.149e-42 Identity = 81/142 (57.04%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P R +++SAWNP+ + MALPPCH QFY+ANG LSCQ+YQRSAD+ LGVPFNIASYALLT MIA V L PG+FIH +GDAH+Y NH QL + PK P++ INP+ KD+ +F EDF+L GY+ I+ +AV Sbjct: 123 PQSRSLIVSAWNPALVDEMALPPCHCLFQFYVANGRLSCQLYQRSADIFLGVPFNIASYALLTMMIAQVTGLKPGEFIHTLGDAHIYSNHFEQARLQLTRTPKKLPVMHINPDVKDLFAFRFEDFRLDGYEADPTIKAPIAV 264
BLAST of EY685266 vs. ExPASy Swiss-Prot
Match: TYSY_CLOCE (Thymidylate synthase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=thyA PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.807e-42 Identity = 77/142 (54.23%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 18 PNDRRIVLSAWNPSDLKLMALPPCHMFAQFYMANGELSCQMYQRSADMGLGVPFNIASYALLTCMIAHVCDLAPGDFIHVIGDAHVYRNHVRPLEEQLQKLPKPFPILKINPEKKDIDSFVAEDFKLIGYDPHQKIEMKMAV 443 P+ RR+++S+WN +++ MALPPCH F QFY+ NG LSC +YQRSAD+ +GVPFNIASYAL T MIA C L G+F+H +GDAH+Y NHV ++ QL + P+P P + INP+ KD+ F DF L YDPH I+ +AV Sbjct: 123 PDSRRLIVSSWNVGEIEKMALPPCHCFYQFYVVNGTLSCMLYQRSADVFIGVPFNIASYALFTMMIAQSCGLRAGEFVHTLGDAHIYLNHVEQVKLQLSRDPRPLPKMNINPDIKDLFQFKYSDFTLTDYDPHPHIKGAVAV 264 The following BLAST results are available for this feature:
BLAST of EY685266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 405
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685266 ID=EY685266; Name=EY685266; organism=Citrus sinensis; type=EST; length=900bpback to top |