EY685257

Overview
NameEY685257
Unique NameEY685257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length882
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  502 NGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHG---SLFHWGPHTANLSIGIP 762
            NG+  VDC  L+ MP V+FTI G  + + P +Y L+ G GV   C SGF   D+ PP GPLWILG  F G   S+F  G +   L+  +P
Sbjct:  303 NGDYEVDCSVLNEMPTVTFTINGIGYQMTPQQYTLQDGGGV---CSSGFQGLDIPPPAGPLWILGDVFIGQYYSVFDRGNNRVGLAPVVP 389          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_SHEEP (Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 32/74 (43.24%), Postives = 46/74 (62.16%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHG 711
            +P   GE  + C+ +SS+P V+  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILG  F G
Sbjct:  291 VPLIQGEYMIPCEKVSSLPQVTLKLGGKDYTLSPEDYTLKVSQAGTTVCLSGFMGMDIPPPGGPLWILGDVFIG 364          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_RAT (Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  + C+ +SS+P ++F +GG+ ++L P +Y+L+V +     C+SGF   D+ PP GPLWILG  F G  +
Sbjct:  313 VPLIQGEYMIPCEKVSSLPIITFKLGGQNYELHPEKYILKVSQAGKTICLSGFMGMDIPPPSGPLWILGDVFIGCYY 389          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_BOVIN (Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  + C+ +SS+P V+  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILG  F G  +
Sbjct:  296 VPLIQGEYMIPCEKVSSLPEVTVKLGGKDYALSPEDYALKVSQAETTVCLSGFMGMDIPPPGGPLWILGDVFIGRYY 372          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13
Identity = 31/77 (40.26%), Postives = 49/77 (63.64%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  + C+ +S++P+V+  +GGK++ L+  +Y L+V +G    C+SGF   D+ PP GPLWILG  F G  +
Sbjct:  316 VPLIQGEYMIPCEKVSTLPDVTLKLGGKLYKLSSEDYTLKVSQGGKTICLSGFMGMDIPPPGGPLWILGDVFIGCYY 392          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.749e-13
Identity = 30/77 (38.96%), Postives = 45/77 (58.44%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  +DC  + ++P +SF +GGK + L   +YVL+  +G    C+SG    ++ PP GPLWILG  F G  +
Sbjct:  304 IPLIQGEYMIDCKKVPTLPTISFNVGGKTYSLTGEQYVLKESQGGKTICLSGLMGLEIPPPAGPLWILGDVFIGQYY 380          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATEB_XENLA (Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  502 NGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHG---SLFHWGPHTANLSIGIP 762
            NG+  VDC  L+ MP ++FTI G  + + P +Y L+  +GV   C SGF   D++PP GPLWILG  F G   S+F  G +   L+  +P
Sbjct:  303 NGDYEVDCTVLNKMPTMTFTINGIGYQMTPQQYTLQDDDGV---CSSGFQGLDISPPAGPLWILGDVFIGQYYSVFDRGNNRVGLAPVVP 389          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.012e-12
Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  + C+ +S++P ++  +GGK + L+P +Y L+V +     C+SGF   D+ PP GPLWILG  F G  +
Sbjct:  318 VPLIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYY 394          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.945e-12
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1
Query:  490 LPSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            +P   GE  + C+ + S+P+V+ T+GGK + L+   Y L+V +     C+SGF   D+ PP GPLWILG  F G  +
Sbjct:  253 VPLIQGEYMIPCEKVPSLPDVTVTLGGKKYKLSSENYTLKVSQAGQTICLSGFMGMDIPPPGGPLWILGDVFIGRYY 329          
BLAST of EY685257 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.023e-12
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1
Query:  493 PSPNGESAVDCDNLSSMPNVSFTIGGKVFDLAPNEYVLEVGEGVAAQCISGFTAFDVAPPRGPLWILGKCFHGSLF 720
            P   G+  + CD +SS+P V+  +GGK + L   +YV +V       C+SGF+  DV PP GPLWILG  F G  +
Sbjct:  307 PLIKGQYVISCDKISSLPVVTLMLGGKPYQLTGEQYVFKVSAQGETICLSGFSGLDVPPPGGPLWILGDVFIGPYY 382          
The following BLAST results are available for this feature:
BLAST of EY685257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CATEA_XENLA2.663e-1344.44Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
CATD_SHEEP2.663e-1343.24Cathepsin D (Fragment) OS=Ovis aries GN=CTSD PE=1 ... [more]
CATD_RAT2.663e-1340.26Cathepsin D OS=Rattus norvegicus GN=Ctsd PE=1 SV=1[more]
CATD_BOVIN2.663e-1341.56Cathepsin D OS=Bos taurus GN=CTSD PE=1 SV=2[more]
CATD_CANFA3.478e-1340.26Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_CLUHA7.749e-1338.96Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1[more]
CATEB_XENLA1.012e-1242.22Cathepsin E-B OS=Xenopus laevis GN=ctse-B PE=2 SV=... [more]
CATD_HUMAN1.012e-1238.96Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_PIG2.945e-1240.26Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]
CATD_CHICK5.023e-1242.11Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-G01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685257 ID=EY685257; Name=EY685257; organism=Citrus sinensis; type=EST; length=882bp
AAATTTGTCATCTCAGTTTGTAGCTACATTATCTGCTGTTTGGTCATAGC
CCTGCCTCACTTTTATTTTGCTATCAGATTCATATGAATTGCATTTATTT
GTAATTGATACTGCTCTGTGGCAATTTCACTTTTCCAGACCATAATTACA
CAAATTAATCATGCCATTGGAGCTTCTGGTGTCATAAGCCAAGAATGCAA
GACTCTGGTTGACCAATATGGAAAAACCATATTGGAAATGCTGATAGCTG
AGACACAACCACAAAAGATCTGCTCACAGATGGGTCTATGTACTTTTGAT
GGGACTCGAGGTTTTAGCATGGGAATTGAGAGTGTCATAGATAAGAGCTC
AGACAAGTCATCTGATGGTGTGCATGACTCTGCTATGTGCTCTGCTTGTG
AGATGGCGGTCATATGGATGCAGAACAAGCTGAGGAGAAATGAGACAGCA
GATCAAATCTTGAATTATGTGAATCAGCTTTGTGACCGTCTGCCCAGTCC
AAATGGAGAATCAGCTGTTGATTGTGACAATTTATCTTCCATGCCCAATG
TTTCATTTACAATTGGTGGCAAAGTATTTGACCTTGCACCAAATGAGTAT
GTTCTTGAAGTGGGAGAGGGAGTTGCAGCCCAATGCATCAGTGGATTTAC
TGCTTTCGATGTGGCCCCTCCGCGTGGTCCTCTGTGGATTCTGGGAAAAT
GTTTTCATGGGTCGCTATTCCACTGGGGTCCACATACGGCAAATTTGTCT
ATTGGAATTCCCCAAAGCAGCTTTGAACAAAATCCCCTGGGCTTCGCCCA
TTTTCCAAAATTAGCTTGTTGGAAAAATTAATATACCCAGCCATACACAA
CATAATATATGGGGAAAAATGGGGGGGGGGTG
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