EY685256

Overview
NameEY685256
Unique NameEY685256
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length659
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_YEAST (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Saccharomyces cerevisiae GN=SLC1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 6.951e-25
Identity = 66/179 (36.87%), Postives = 101/179 (56.42%), Query Frame = 3
Query:   27 VIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGE--TLLPFKKGAFQMAIAAGVPIVQVCVS--TYVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDRELQTAPAI 551
            ++IANHQS  D+F+ G + P       KKSLK+VP  G    L+G   +DR    +A  ++    + ++    ++WVFPEGTR++    T+LPFKKGAF +A    +PIV V VS  + +   K   +N G +++R L PI T+ LT D +    +  R+QM D +    +E+  +PAI
Sbjct:   77 IMIANHQSTLDIFMLGRIFPPGCTVTAKKSLKYVPFLGWFMALSGTYFLDRSKRQEAIDTLNKGLENVKKNKRALWVFPEGTRSYTSELTMLPFKKGAFHLAQQGKIPIVPVVVSNTSTLVSPKYGVFNRGCMIVRILKPISTENLTKDKIGEFAEKVRDQMVDTL----KEIGYSPAI 251          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLCB_MOUSE (1-acyl-sn-glycerol-3-phosphate acyltransferase beta OS=Mus musculus GN=Agpat2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.549e-24
Identity = 63/162 (38.89%), Postives = 89/162 (54.94%), Query Frame = 3
Query:   24 CVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVSTYVK--QMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMR 503
            CVII+NHQS  D+     ++P R V I K+ L +    G + +L G   I+R  A  A   M      +   +  +W++PEGTRN    LLPFKKGAF +AI A VPI+ V  S++     +K   + SG I ++ L  +PT GLT  D+  L+ TC + MR
Sbjct:   92 CVIISNHQSILDMMGLMEILPKRCVQIAKRELMFTGPVGLIMYLGGVYFINRQQARTAMSVMADLGDLMVKENLKVWIYPEGTRNDNGDLLPFKKGAFYLAIQAQVPIIPVVYSSFSSFYNVKTKLFTSGTIKVQVLDAVPTNGLTDADVTKLVDTCYQSMR 253          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: YLD2_SCHPO (Uncharacterized acyltransferase C1851.02 OS=Schizosaccharomyces pombe GN=SPAC1851.02 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23
Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 3
Query:   12 KPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFG--ETLLPFKKGAFQMAIAAGVPIVQVCVSTY--VKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMD 524
            K  S V++ NHQS  D+   G         I KKSL++VP+ G    L+  V IDR     A +      + ++  + SIWVF EGTR++     LLP KKGAF +A+ A VPI+ + + TY  +       +N G+ LI+ L PIPT+G T +D+  L+      M + +  +D
Sbjct:   97 KHKSAVLVVNHQSELDILAIGRTFGPNYSVIAKKSLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVFAEGTRSYSLKPCLLPLKKGAFHLAVQAQVPIIPIAIQTYGHLFHPPTKVFNKGEALIKVLDPIPTEGKTAEDVNDLLHETETAMNNALVEID 271          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_LIMDO (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Limnanthes douglasii GN=PLSC PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.270e-18
Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = 3
Query:    9 HKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIV-QVCVSTYVKQMK-LNRWNSGDILIRSLPPIPTKGLTMD 461
            H     + I+NH S  D F    + P  TV + KK + W PL GQL+ LA ++ IDR N   A +SM    + +   + S+ +FPEGTR+    LLPFKKG   +A+ + +PIV  +   T++   K   R     I ++ LPPI T   T+D
Sbjct:   98 HTKKRAIYISNHASPIDAFFVMWLAPIGTVGVAKKEVIWYPLLGQLYTLAHHIRIDRSNPAAAIQSMKEAVRVITEKNLSLIMFPEGTRSRDGRLLPFKKGFVHLALQSHLPIVPMILTGTHLAWRKGTFRVRPVPITVKYLPPINTDDWTVD 250          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_LIMAL (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Limnanthes alba PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.270e-18
Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = 3
Query:    9 HKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIV-QVCVSTYVKQMK-LNRWNSGDILIRSLPPIPTKGLTMD 461
            H     + I+NH S  D F    + P  TV + KK + W PL GQL+ LA ++ IDR N   A +SM    + +   + S+ +FPEGTR+    LLPFKKG   +A+ + +PIV  +   T++   K   R     I ++ LPPI T   T+D
Sbjct:   98 HTKKRAIYISNHASPIDAFFVMWLAPIGTVGVAKKEVIWYPLLGQLYTLAHHIRIDRSNPAAAIQSMKEAVRVITEKNLSLIMFPEGTRSGDGRLLPFKKGFVHLALQSHLPIVPMILTGTHLAWRKGTFRVRPVPITVKYLPPINTDDWTVD 250          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLC1_CAEEL (Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase acl-1 OS=Caenorhabditis elegans GN=acl-1 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.658e-18
Identity = 61/176 (34.66%), Postives = 89/176 (50.57%), Query Frame = 3
Query:    9 HKPSSCVIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIVQVCVST--YVKQMKLNRWNSGDILIRSLPPIPTKGLTMDDMPLLMQTCREQMRDCIEAMDRE 530
            H     +IIANHQS  D+       P   V + K SLK++P F    +L  +V I+R +  KA +++ TT   +      +W++PEGTRN    LLPFKKGAF +A  A +PIV    S+  +       R  SG+ +I  LP + +     D +  L   CR+ M+   E +D E
Sbjct:   83 HDKKPYIIIANHQSALDVLGMSFAWPVDCVVMLKSSLKYLPGFNLCAYLCDSVYINRFSKEKALKTVDTTLHEIVTKKRKVWIYPEGTRNAEPELLPFKKGAFILAKQAKIPIVPCVFSSHKFFYSHAEKRLTSGNCIIDILPEVDSS--KFDSIDDLSAHCRKIMQAHREKLDAE 256          
BLAST of EY685256 vs. ExPASy Swiss-Prot
Match: PLSC_COCNU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cocos nucifera PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.084e-17
Identity = 53/141 (37.59%), Postives = 76/141 (53.90%), Query Frame = 3
Query:   27 VIIANHQSNYDLFVFGTVVPYRTVCIGKKSLKWVPLFGQLFWLAGNVLIDRGNAHKARRSMLTTTQTLQHADTSIWVFPEGTRNFGETLLPFKKGAFQMAIAAGVPIV-QVCVSTYVKQMKLN-RWNSGDILIRSLPPIPT 443
            + I NH S  D+F+   ++P  TV I KK + W PLFGQL+ LA +  IDR N   A  S+    + +   + S+ +FPEGTR+    LLPFKKG   +A+   +PIV  V   T++   K + R     I ++   PI T
Sbjct:  125 IYICNHASLVDIFLIMWLIPKGTVTIAKKEIIWYPLFGQLYVLANHQRIDRSNPSAAIESIKEVARAVVKKNLSLIIFPEGTRSKTGRLLPFKKGFIHIALQTRLPIVPMVLTGTHLAWRKNSLRVRPAPITVKYFSPIKT 265          
The following BLAST results are available for this feature:
BLAST of EY685256 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
PLSC_YEAST6.951e-2536.87Probable 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
PLCB_MOUSE1.549e-2438.891-acyl-sn-glycerol-3-phosphate acyltransferase bet... [more]
YLD2_SCHPO1.712e-2335.43Uncharacterized acyltransferase C1851.02 OS=Schizo... [more]
PLSC_LIMDO1.270e-1836.601-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLSC_LIMAL1.270e-1836.601-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]
PLC1_CAEEL1.658e-1834.66Putative 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
PLSC_COCNU4.084e-1737.591-acyl-sn-glycerol-3-phosphate acyltransferase OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-F12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685256 ID=EY685256; Name=EY685256; organism=Citrus sinensis; type=EST; length=659bp
TCGCTGCGCACAAGCCCAGCAGTTGCGTGATCATCGCCAACCATCAGTCC
AACTATGACCTGTTTGTGTTTGGCACCGTGGTGCCCTACCGCACGGTGTG
TATCGGCAAGAAGAGCCTGAAGTGGGTGCCGTTGTTTGGGCAACTGTTCT
GGCTGGCGGGCAATGTGTTGATTGACCGGGGCAACGCCCACAAGGCGCGG
CGCTCGATGCTGACCACCACACAAACCTTGCAGCATGCAGACACCTCGAT
CTGGGTGTTCCCGGAGGGCACGCGCAACTTCGGCGAAACCCTGCTGCCGT
TCAAGAAAGGCGCGTTCCAGATGGCGATCGCCGCAGGCGTGCCGATTGTG
CAGGTGTGTGTCAGCACTTACGTGAAGCAGATGAAGCTCAACCGCTGGAA
CAGTGGCGATATTCTGATTCGCTCGCTGCCGCCGATTCCTACGAAGGGGC
TGACGATGGATGACATGCCGCTGTTAATGCAGACCTGCCGTGAGCAAATG
CGCGATTGCATCGAGGCGATGGATCGCGAGCTGCAAACTGCGCCTGCAAT
CACGGGTGAACCCCGCCGAATTTGCTGACTCTGATTGGGCAGGGCAGCTA
AGCTGCCTGACAGTTGTCATCTGCCATTCAAGAAGAAGCGATCAGCACTA
ATGGGAGAA
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