EY685255

Overview
NameEY685255
Unique NameEY685255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY685255 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 70/254 (27.56%), Postives = 108/254 (42.52%), Query Frame = 1 
Query:  112 IQNALKKDI--GLAAGLIRIHFHDCFVQGCDG-SVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKKTCPTSDSNNTTVFDIRSPNVFDNKYYVDLMNRQGL----------LTSDQDLYPDKKTKELVPNFAVGPSLFFSKF 834
            +QN ++K +  G AAG++R+ FHD      D  S  + GS + +  RP     K++LK +   +A+V  +  + VS AD++++A  ++V++ GGP   + LGR DS        LP    + + +   F+ K F+ +E VALSG HT+G                    K F +                     P VFDN YY  L+ +             L SD  L  D +    V  +A     FF  F
Sbjct:  101 MQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELERPENIGLKKSLKVL--AKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIG-------------------SKGFGD---------------------PTVFDNAYYKILLEKPWTSTSKMTSMVGLPSDHALVQDDECLRWVKRYAEDQDKFFEDF 312
The following BLAST results are available for this feature:
BLAST of EY685255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
APX6_ARATH5.136e-1227.56Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-F11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685255 ID=EY685255; Name=EY685255; organism=Citrus sinensis; type=EST; length=895bp
CTTTTGCTTGCTTCTTTCACTGAGGCACAAAAGCCCCCAGTAGCGAAAGG
TCTCTCATGGACTTTTTATGACCAGAGCTGTCCCAAGCTTGAATCCATTG
TCAGAAAACAGATCCAAAATGCCCTGAAAAAAGATATCGGCCTAGCTGCT
GGCTTGATTCGCATCCATTTCCACGATTGCTTCGTTCAGGGATGTGATGG
ATCAGTGTTGCTAGAGGGATCAACTAGTGAGCAAAATGCACGTCCAAACC
TAAGCTTAAGGAAAGAGGCTTTAAAATTTGTAGACGATCTTCGTGCTCGT
GTTCACAAGGAGTGTGGCAGAGTTGTTTCTTGTGCTGATATTCTTGCCCT
TGCTGCTCGCGATTCTGTTGCCTTGTCTGGAGGGCCGAATTACGACCTAC
CATTGGGAAGGCGAGACAGCAAAACATTCGCAACAGTGGTAAATCTGCCA
TCACCGTTCAGCAACACCACCGTGATCCTCAACGATTTCCGAGAAAAAAC
CTTCAACGCCAGGGAAACCGTGGCCCTCTCCGGCGGGCACACCGTTGGGC
TAGCTCACTGCCCTGCATTCACCAATCGCCTCTATCCCAAACAAGACCCC
ACACTGGACAAAACATTCGCCAACAATCTCAAAAAGACATGCCCCACTTC
GGATTCCAACAACACCACCGTCTTCGACATCCGGTCCCCGAACGTGTTCG
ACAACAAGTACTACGTTGACTTGATGAACCGACAGGGGTTGCTGACCTCG
GACCAGGATCTTTACCCGGACAAAAAAACCAAGGAGCTTGTCCCGAACTT
TGCTGTGGGACCATCCCTCTTTTTTTCCAAATTTTGGCCATTTCAAAGAA
AAAAAATGTCCCATTTGAATGGGGCTCCCCGGGGAAAAAAGGGGA
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