EY685238

Overview
NameEY685238
Unique NameEY685238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.839e-26
Identity = 64/152 (42.11%), Postives = 81/152 (53.29%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRY--PRKSDATFPLR-PMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            +E +FHLWFDPT +FH Y + W+P  +IF VD +PIR +  P      FP R PM LY S+W+A  WAT  G  K D+   PF   YRN+ + GC  A+G S C     SP  +  L       M  VQ  Y+IY Y  D  R    +P EC
Sbjct:  132 KEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSC--SANSPWFTQKLDSNGQTRMKGVQSKYMIYNYCTDKRRFPRGVPAEC 281          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.285e-25
Identity = 65/158 (41.14%), Postives = 87/158 (55.06%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDAT-----FP-LRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPS-----GSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE+R  LWFDPT+D+H Y++LW+  +L+FFVD VPIR Y + SD       FP  +PMYL+ SIW+A  WAT  G  K D+K  PFV  Y++F + GC    P        + +      +  LS+ Q     WVQR  ++Y Y  D  R  T   EC
Sbjct:  130 REMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVY-KNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQRNLVVYDYCKDSERFPTLPWEC 286          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.678e-25
Identity = 65/155 (41.94%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYP--RKSDATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFK-IAGCTADGPS---GCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE++F LWFDPT DFH Y V W+P  +IF VD +PIR +    K+   +P  +PM +Y S+W+A  WATE GR K D+   PF   YRNF   + C+    S    C P   S   +  L+  Q   M+WVQR ++IY Y  D  R    +P EC
Sbjct:  132 REMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKWVTCEPNSNSWMWT-TLNPAQYGKMMWVQRDFMIYNYCTDFKRFPQGLPKEC 285          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.192e-25
Identity = 61/156 (39.10%), Postives = 85/156 (54.49%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPR---KSDATFPLRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASP----SGSGVLSQQQVAA--MLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDP+ D+H Y +LWS   ++F+VDDVPIR Y     K+ A    +PM +Y ++W+A  WAT  G  K D+   PF   Y++F I GC   GP+ C   P++P     G    S   V A    WV+  +++Y Y  D +R     PEC
Sbjct:  138 REQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFC---PSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPEC 290          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.863e-25
Identity = 63/155 (40.65%), Postives = 82/155 (52.90%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSG-CHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT+D+H Y+VLW+   + FFVDD PIR +    D    +P  +PM LY S+W+A  WAT  GR K D+   PFV  YR F + GC A   +  C    A     P     L   Q   + WV++ + IY Y  D +R     PEC
Sbjct:  134 REQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQD-LDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25
Identity = 65/156 (41.67%), Postives = 82/156 (52.56%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPR-KSDAT-FPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTA-DGPSGCHPPPASPSGSGVLSQQQVAA----MLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE +F LWFDPT DFH Y++LW+P  +IF VD  PIR +   +S  T FP  +PM +Y S+W+A  WAT  G  K D+   PF   YR F    C   +G S C       S    LSQ+  +     M WVQ  Y+IY Y  D  R    +P EC
Sbjct:  128 REQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPREC 283          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.739e-25
Identity = 60/152 (39.47%), Postives = 79/152 (51.97%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            +E +FHLWFDPT +FH Y + W+P  +IF VD +PIR +        P    +PM LY S+W+A  WAT  G  K D+   PF   YRN+ + GC  A+G S C  P  S   +  L       M  VQ  Y++Y Y  D  R    +P EC
Sbjct:  132 KEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSC--PANSSWFTQQLDSNGQTRMKGVQSKYMVYNYCNDKRRFPRGVPVEC 281          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.377e-25
Identity = 61/156 (39.10%), Postives = 80/156 (51.28%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSG---CHPPPA---SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT+ +H Y+VLW+  +++ FVDDVPIR +    D    FP  +PM +Y S+WDA  WAT  G  K D+   PF   Y +F + GC A  P     C+              L   Q   + WV++ Y IY Y  D  R  T  PEC
Sbjct:  134 REQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 65/159 (40.88%), Postives = 85/159 (53.46%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGV---LSQQQVAA----MLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            +E +F LWFDPT +FH Y +LW+P  +IF VD  PIR +         FP  +PM +Y S+W+A  WAT  G  K D+   PF   YR F+   C  ++G S C  P AS  G+     LSQ+  +     M WVQR Y+IY Y  D  R    +P EC
Sbjct:  125 KEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSC--PNASKQGTTTGSWLSQELDSTAQQRMRWVQRNYMIYNYCTDAKRFPQGLPKEC 281          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 8.329e-25
Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNR-DHTEIPEC 441
            +E +FHLWFDPT DFH Y ++W+P  +IF +D +PIR +        P    +PM LY S+W+A  WAT  G  K D+   PF   YRN+ +  C  ++G S C     S   + VL  +    + W QR Y++Y Y  D  R      PEC
Sbjct:  132 KEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSC--SANSSWFTQVLDFKGKNRVKWAQRKYMVYNYCTDKKRFPQGAPPEC 281          
The following BLAST results are available for this feature:
BLAST of EY685238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH17_ARATH9.839e-2642.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH1.285e-2541.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH1.678e-2541.94Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH6_ARATH2.192e-2539.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT2.863e-2540.65Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH23_ARATH3.739e-2541.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH18_ARATH3.739e-2539.47Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC6.377e-2539.10Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH22_ARATH8.329e-2540.88Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH20_ARATH8.329e-2538.16Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-E01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685238 ID=EY685238; Name=EY685238; organism=Citrus sinensis; type=EST; length=854bp
AGAGAATTGAGGTTTCATCTCTGGTTTGATCCAACTCAAGACTTTCATCA
CTATGCTGTGCTATGGTCCCCAAGTGAGCTCATATTCTTCGTGGATGATG
TGCCAATTAGAAGGTATCCAAGAAAGAGCGATGCCACATTTCCCTTAAGA
CCAATGTATCTGTACGGTTCAATATGGGATGCATCATCATGGGCCACCGA
GGAGGGCAGATACAAAGCCGACTATAAGTACCAACCTTTTGTTGGTCAGT
ACAGAAATTTCAAAATAGCAGGTTGCACCGCGGACGGGCCATCCGGGTGC
CACCCACCCCCGGCCTCGCCGTCCGGGTCCGGCGTCCTGAGCCAGCAGCA
AGTTGCCGCAATGCTATGGGTTCAGAGGACCTACCTGATTTATGGCTATT
GGTATGATCCCAATAGAGACCATACCGAAATACCCGAGTGCTAATAATTA
GGGGTAAGGGTACATGGTCCCATTGACGCCTTGATCTGGGGTGCAACGGC
TCGCCGTTTCCGAGCACTAGACGCGGCAATCCACGGGGAAAGCGGGGGGC
GAACCCGGGCACGCAGGGAGGCGCAGGGGCCAGAGGACATCGCGCGCTGC
GGCTCGTGACCGGAGCCACCTCGCAAATAGCATAGTCGGAAGGAGGAGAA
GACCGAATGAACGTGAAACGCGCACAATCACGTCAGCACAACGACCATAG
ACAGCTCCCGGCACCCGCCAGACACGACATCTCCACCAGATGACCGAGAC
ACCTGCGCTCGGCCGACAACGCTGCGCCCGCCGCACGCCCGCGGCATCTC
CTACACCACGTCGAGTCTAAGACGGCCACGCGCACACGGCACGCGTGCCG
GCCC
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