EY685238

Overview
NameEY685238
Unique NameEY685238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 57/156 (36.54%), Postives = 84/156 (53.85%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFP---LRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASP------SGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDP++DFH YA+ W+   ++F+VD+VPIR Y        P    +PM +Y ++W+A  WAT  G  K ++   PF   Y++F I GC   GP+ C   PA+       S    LS  +  +  WV+  +++Y Y  D +R     PEC
Sbjct:  137 REQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADC---PANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPEC 289          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.088e-24
Identity = 64/161 (39.75%), Postives = 85/161 (52.80%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGVLSQQQVAAML---------WVQRTYLIYGYWYDPNRDHTEI-PEC 441
            RE +F+LWFDPT++FH Y+++W P  +IF VD+VPIR +        P    +PM +Y S+W+A  WAT  G  K D+   PF   YR F  A CT + G S C P   S   +G   + QVA  L         WVQ+ ++IY Y  D  R      PEC
Sbjct:  129 REQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTVSSGSSFCDPKFKSSFTNG---ESQVANELNAYGRRRLRWVQKYFMIYDYCSDLKRFPQGFPPEC 286          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 60/154 (38.96%), Postives = 81/154 (52.60%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTAD-GPSGCHPPPA---SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDP++D+H Y+VLW+  +++FFVDDVPIR +    D    FP  +PM +Y S+W+A  WAT  G  K +++  PFV  YR F + GC A      C               L   Q   + WV++ Y IY Y  D  R     PEC
Sbjct:  134 REQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 53/153 (34.64%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPLRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPS----GCHPPPA--SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE RF LWF+PT+ +H Y +LW+P +++F+VD++PIR Y  ++  ++P +PM +  S+W+   WAT+ GR K ++ Y PF+  +R+F ++GC  DG S     C       +      LS  +      V+  Y+ Y Y  D ++  T   EC
Sbjct:  137 REERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYPSKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.856e-24
Identity = 59/152 (38.82%), Postives = 78/152 (51.32%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCT-ADGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEI-PEC 441
            +E +FHLWFDPT +FH Y + W+P  +IF VD +PIR +        P    +PM LY S+W+A  WAT  G  K D+   PF   YRN+ + GC   +G S C  P  S   +  L       M  VQ  Y++Y Y  D  R    + PEC
Sbjct:  127 KEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVC--PANSQWFTQKLDSNGQTRMKGVQSKYMVYNYCSDKKRFPRGVPPEC 276          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.134e-24
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRK--SDATFP-LRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPSGSGV---LSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE++F+LWFDPT DFH Y VLW+P  +IF VD +PIR +     +   +P  +PM +Y S+W+A  WAT+ G+ K D+   PF   YR+F    C +           + S S +   L+  Q+  + WVQ+ Y+IY Y  D  R    +P EC
Sbjct:  129 REMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWNWVTCNANSNSWMWTTLNSNQLGQLKWVQKDYMIYNYCTDFKRFPQGLPTEC 282          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.399e-24
Identity = 60/160 (37.50%), Postives = 82/160 (51.25%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTA---------DGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNR-DHTEIPEC 441
            RE R +LWFDPT+++H Y++LW+  +++FFVD+VPIR +    D    FP  +PM +Y S+W+A  WAT  G  K D+   PF+  Y+ F I GC A          G      P         L   Q   + WV++ Y IY Y  D  R  H   PEC
Sbjct:  135 REQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRD-----LDAAQWRRLRWVRQKYTIYNYCTDTKRYPHISPPEC 289          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.679e-23
Identity = 59/159 (37.11%), Postives = 78/159 (49.06%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTA---------DGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT  +H Y+VLW+  +++F+VDD PIR +   +D    FP  +PM +Y S+W+A  WAT  G  K D+   PF+  Y+ F I GC A          G      P         L   Q   + WV+  Y IY Y  D  R     PEC
Sbjct:  133 REQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRD-----LDAAQWQKLAWVRNKYTIYNYCTDRKRYSQVPPEC 286          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.499e-23
Identity = 59/154 (38.31%), Postives = 83/154 (53.90%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRK--SDATFP-LRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPSGSGV---LSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE++F+LWFDPT DFH Y VLW+P  +IF VD +PIR +     +   +P  +PM +Y S+W+A  WAT+ G+ K D+   PF   Y++F    C +           + S S +   L+  Q   M WVQ  Y+IY Y  D  R    +P EC
Sbjct:  128 REMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCCSRTSLLNWVTCNANSNSWMWTTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.570e-23
Identity = 55/142 (38.73%), Postives = 74/142 (52.11%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNR 417
            +E +FHLWFDPT +FH Y++LW+P  +I  VDD PIR +         FP  +PM +Y S+W+A  WAT  G  K D+   PF+  YRN KI              P S   +  +     A + WVQ+ Y+IY Y  D  R
Sbjct:  126 KEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKI-----------DSKPNSNWYTQEMDSTSQARLKWVQKNYMIYNYCTDHRR 256          
The following BLAST results are available for this feature:
BLAST of EY685238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH7_ARATH1.088e-2436.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH1.088e-2439.75Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH1.856e-2438.96Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH1.856e-2434.64Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH19_ARATH1.856e-2438.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH4.134e-2438.31Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN5.399e-2437.50Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN2.679e-2337.11Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH3.499e-2338.31Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH4.570e-2338.73Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-E01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685238 ID=EY685238; Name=EY685238; organism=Citrus sinensis; type=EST; length=854bp
AGAGAATTGAGGTTTCATCTCTGGTTTGATCCAACTCAAGACTTTCATCA
CTATGCTGTGCTATGGTCCCCAAGTGAGCTCATATTCTTCGTGGATGATG
TGCCAATTAGAAGGTATCCAAGAAAGAGCGATGCCACATTTCCCTTAAGA
CCAATGTATCTGTACGGTTCAATATGGGATGCATCATCATGGGCCACCGA
GGAGGGCAGATACAAAGCCGACTATAAGTACCAACCTTTTGTTGGTCAGT
ACAGAAATTTCAAAATAGCAGGTTGCACCGCGGACGGGCCATCCGGGTGC
CACCCACCCCCGGCCTCGCCGTCCGGGTCCGGCGTCCTGAGCCAGCAGCA
AGTTGCCGCAATGCTATGGGTTCAGAGGACCTACCTGATTTATGGCTATT
GGTATGATCCCAATAGAGACCATACCGAAATACCCGAGTGCTAATAATTA
GGGGTAAGGGTACATGGTCCCATTGACGCCTTGATCTGGGGTGCAACGGC
TCGCCGTTTCCGAGCACTAGACGCGGCAATCCACGGGGAAAGCGGGGGGC
GAACCCGGGCACGCAGGGAGGCGCAGGGGCCAGAGGACATCGCGCGCTGC
GGCTCGTGACCGGAGCCACCTCGCAAATAGCATAGTCGGAAGGAGGAGAA
GACCGAATGAACGTGAAACGCGCACAATCACGTCAGCACAACGACCATAG
ACAGCTCCCGGCACCCGCCAGACACGACATCTCCACCAGATGACCGAGAC
ACCTGCGCTCGGCCGACAACGCTGCGCCCGCCGCACGCCCGCGGCATCTC
CTACACCACGTCGAGTCTAAGACGGCCACGCGCACACGGCACGCGTGCCG
GCCC
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