EY685238

Overview
NameEY685238
Unique NameEY685238
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length854
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.570e-23
Identity = 58/156 (37.18%), Postives = 78/156 (50.00%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSG---CHPPPA---SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT+ +H Y+VLW+   ++ FVDDVPIR +    D    FP  +PM +Y S+WDA  WAT  G  K ++   PF   Y +F + GC A  P     C+              L   Q   + WV++ Y +Y Y  D  R     PEC
Sbjct:  135 REQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.796e-23
Identity = 57/169 (33.73%), Postives = 86/169 (50.89%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKS--DATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFK---------IAGCTADGPSGCHPPPASPSGSGVLSQ---------QQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE +F+LWFDPT  FH+Y++LW+PS ++F++D  PIR +         +P  +PM +YGS+W+A  WAT  G  K ++   PFV  + N+          + G T   P  C P  ++ S S   S+              + WVQR +++Y Y  D  R    +P EC
Sbjct:  130 REQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMNYNSENACVWSIVNGTTTTSP--CSPGDSTSSSSSSTSEWFSQRGMDSSSKKVLRWVQRKFMVYNYCKDKKRFSNGLPVEC 296          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.962e-22
Identity = 58/157 (36.94%), Postives = 82/157 (52.23%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGC---TADGPSGCHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT +FH Y++LWS   ++F VD+ PIR      +   P    + M +Y SIW+A  WAT+ G  K D+ + PFV  Y+ F+I  C   T    S C+         P+ S  LS  Q   ++WV+  ++IY Y +D  R      EC
Sbjct:  129 REQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVS-ELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLEC 284          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.869e-22
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYP--RKSDATFPLRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPSGS----------GVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE +F  WFDPT  FH Y +LW+P +++F+VD VPIR +   +KS   +P +PM L  S+W+  +WAT  G+ K ++ Y PF  QY+ F   GC  +G S      A+  GS            LS  +   M  V+  Y+ Y Y  D  R      EC
Sbjct:  134 REQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSN----NANVCGSTRYWWNTRTYSQLSANEQKVMENVRAKYMTYDYCSDRPRYPVPPSEC 288          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 5.053e-22
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSDATFPL---RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPASPSGSGV------LSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE +F+LWFDPT++FH Y+++W P  +IF VD+ PIR +        P    +PM +Y S+W+A  WAT  G  K D+   PF   YRNFK    ++          +S S SG       L       + WVQ+ ++IY Y  D  R    +P EC
Sbjct:  134 REQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEFSS---------KSSISNSGAEYEANELDAYSRRRLRWVQKYFMIYNYCSDLKRFPQGLPAEC 281          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.619e-22
Identity = 57/156 (36.54%), Postives = 86/156 (55.13%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFP-LRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADG-PSGCHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIP-EC 441
            RE R HLWFDP +DFH Y++LW+  +++F VD +PIR Y    +    +P L+PM +  S+W+  SWAT  G  K D+   PFV  + ++KI  C   G  S C+        + +    L++ Q     WV++ +LIY Y  D  R + ++P EC
Sbjct:  139 REERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWFKWVRKYHLIYDYCQDYGRFNNKLPKEC 294          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.920e-21
Identity = 55/154 (35.71%), Postives = 81/154 (52.60%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYP--RKSDATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDPT+ +H Y+VLW+  +++F VD++PIR +   ++    FP  +PM +Y S+W+A  WAT  G  K D+   PFV +Y+ F + GC A   S             +    L   Q   + WV++ + IY Y  D  R     PEC
Sbjct:  134 REQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.278e-21
Identity = 55/154 (35.71%), Postives = 79/154 (51.30%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDP++ +H Y+VLW+  +++FFVD++PIR +    D    FP  +PM LY S+W+A  WAT  G  K ++   PF+  YR F I GC A   +             +    L  +Q   + WV+  + IY Y  D  R      EC
Sbjct:  136 REQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPL-RPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPA----SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE R +LWFDP++ +H Y++LW+  +++FFVD++PIR +    D    FP  +PM LY S+W+A  WAT  G  K ++   PFV  Y+ F I GC A   +                  L  +Q   + WV+  + IY Y  D  R      EC
Sbjct:  137 REQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
BLAST of EY685238 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.773e-20
Identity = 47/152 (30.92%), Postives = 80/152 (52.63%), Query Frame = 1
Query:    1 RELRFHLWFDPTQDFHHYAVLWSPSELIFFVDDVPIRRYPRKSD--ATFPLRPMYLYGSIWDASSWATEEGRYKADYKYQPFVGQYRNFKIAGCTADGPSGCHPPPA---SPSGSGVLSQQQVAAMLWVQRTYLIYGYWYDPNRDHTEIPEC 441
            RE +  LWFDP++DFH YA+LW+P +++ +VD++P+R +   +     +P +PM +  S+W+  +WAT+ G+ K ++   PF   ++ F  +GC  +         A   +      LS  +  A   V++ Y+ Y Y  D  R H    EC
Sbjct:  140 REQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWNGENWATDGGKSKINWSLAPFKANFQGFNNSGCFTNAEKNACGSSAYWWNTGSYSKLSDSEQKAYTNVRQKYMNYDYCSDKVRFHVPPSEC 291          
The following BLAST results are available for this feature:
BLAST of EY685238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH1_SOLLC4.570e-2337.18Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH21_ARATH7.796e-2333.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH9_ARATH2.962e-2236.94Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH2_ARATH3.869e-2236.48Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN5.053e-2236.31Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH10_ARATH8.619e-2236.54Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN1.920e-2135.71Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB4.278e-2135.71Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH4_ARATH9.530e-2135.06Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH2.773e-2030.92Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-011-E01-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685238 ID=EY685238; Name=EY685238; organism=Citrus sinensis; type=EST; length=854bp
AGAGAATTGAGGTTTCATCTCTGGTTTGATCCAACTCAAGACTTTCATCA
CTATGCTGTGCTATGGTCCCCAAGTGAGCTCATATTCTTCGTGGATGATG
TGCCAATTAGAAGGTATCCAAGAAAGAGCGATGCCACATTTCCCTTAAGA
CCAATGTATCTGTACGGTTCAATATGGGATGCATCATCATGGGCCACCGA
GGAGGGCAGATACAAAGCCGACTATAAGTACCAACCTTTTGTTGGTCAGT
ACAGAAATTTCAAAATAGCAGGTTGCACCGCGGACGGGCCATCCGGGTGC
CACCCACCCCCGGCCTCGCCGTCCGGGTCCGGCGTCCTGAGCCAGCAGCA
AGTTGCCGCAATGCTATGGGTTCAGAGGACCTACCTGATTTATGGCTATT
GGTATGATCCCAATAGAGACCATACCGAAATACCCGAGTGCTAATAATTA
GGGGTAAGGGTACATGGTCCCATTGACGCCTTGATCTGGGGTGCAACGGC
TCGCCGTTTCCGAGCACTAGACGCGGCAATCCACGGGGAAAGCGGGGGGC
GAACCCGGGCACGCAGGGAGGCGCAGGGGCCAGAGGACATCGCGCGCTGC
GGCTCGTGACCGGAGCCACCTCGCAAATAGCATAGTCGGAAGGAGGAGAA
GACCGAATGAACGTGAAACGCGCACAATCACGTCAGCACAACGACCATAG
ACAGCTCCCGGCACCCGCCAGACACGACATCTCCACCAGATGACCGAGAC
ACCTGCGCTCGGCCGACAACGCTGCGCCCGCCGCACGCCCGCGGCATCTC
CTACACCACGTCGAGTCTAAGACGGCCACGCGCACACGGCACGCGTGCCG
GCCC
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