EY685181

Overview
NameEY685181
Unique NameEY685181
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: HYDA_BACST (D-hydantoinase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.545e-18
Identity = 55/115 (47.83%), Postives = 69/115 (60.00%), Query Frame = 2
Query:   14 LYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFN-STQKAFGIDDFRKIPNGVNGIEERMHL 355
            LYVVHV    A+E+IA+AR  G  V GE     LVLD S+L   +F   AKYV SPP+R   H + L  AL  G LQ +G+D C+F+   QK  G  DF KIPNG   IE+R+ +
Sbjct:  235 LYVVHVSCAQAVEKIAEARNKGLNVWGETCPQYLVLDQSYLEKPNF-EGAKYVWSPPLREKWHQEVLWNALKNGQLQTLGSDQCSFDFKGQKELGRGDFTKIPNGGPIIEDRVSI 348          
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: DPYL5_HUMAN (Dihydropyrimidinase-related protein 5 OS=Homo sapiens GN=DPYSL5 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.451e-17
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2
Query:   11 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLAWD 364
            P+Y+V+V S+ A + IA A+  G+ V+ E   +   L     +H D+  AA YV  PP+R   +    L + LA   L +V +DH  F + QKA G +DF KIP+GV+G+++RM + W+
Sbjct:  242 PIYLVNVSSISAGDVIAAAKMQGKVVLAETTTAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVIWE 360          
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: HYDA_BURPI (D-hydantoinase OS=Burkholderia pickettii GN=hyuA PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 47/121 (38.84%), Postives = 68/121 (56.20%), Query Frame = 2
Query:    2 VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF-NSTQKAFGIDDFRKIPNGVNGIEERMHLAW 361
            VN P+Y+VHV   +++EE+ +A+  G R + E     L L    L   DF   AKYV +PP RA   +  L  AL  G+ + V +DHC++     K  G +DFR IPNG  G+EER+ + +
Sbjct:  229 VNAPIYIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF-EGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVY 348          
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: DPYL5_RAT (Dihydropyrimidinase-related protein 5 OS=Rattus norvegicus GN=Dpysl5 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2
Query:   11 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLAWD 364
            P+Y+V+V S+ A + IA A+  G+ V+ E   +   L     +H D+  AA YV  PP+R   +    L + LA   L +V +DH  F + QKA G +DF KIP+GV+G+++RM + W+
Sbjct:  242 PIYLVNVSSISAGDVIAAAKMQGKVVLAETTNAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVVWE 360          
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: DPYL5_MOUSE (Dihydropyrimidinase-related protein 5 OS=Mus musculus GN=Dpysl5 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.612e-16
Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 2
Query:   11 PLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLAWD 364
            P+Y+V+V S+ A + IA A+  G+ V+ E   +   L     +H D+  AA YV  PP+R   +    L + LA   L +V +DH  F + QKA G +DF KIP+GV+G+++RM + W+
Sbjct:  242 PIYLVNVSSISAGDVIAAAKMQGKVVLAETTNAHATLTGLHYYHQDWSHAAAYVTVPPLRLDTNTSTYLMSLLANDTLNIVASDHRPFTTKQKAMGKEDFTKIPHGVSGVQDRMSVVWE 360          
BLAST of EY685181 vs. ExPASy Swiss-Prot
Match: HYDA_RHIRD (D-hydantoinase OS=Rhizobium radiobacter GN=hyuA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.155e-14
Identity = 44/121 (36.36%), Postives = 66/121 (54.55%), Query Frame = 2
Query:    2 VNTPLYVVHVMSMDAMEEIAKARKAGQRVIGEPVVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAF-NSTQKAFGIDDFRKIPNGVNGIEERMHLAW 361
            VN P+Y+VH+   ++ +E+ +A+  G   + E     L L    L   DF   AKYV +PP R     + L  AL  G+L+ V +DHC++     K  G +DFR IPNG  G+EER+ + +
Sbjct:  229 VNAPIYIVHLTCEESFDELMRAKARGVHALAETCTQYLYLTKDDLERPDF-EGAKYVFTPPPRTKKDQEILWNALRNGVLETVSSDHCSWLFEGHKDRGRNDFRAIPNGAPGVEERLMMVY 348          
The following BLAST results are available for this feature:
BLAST of EY685181 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
HYDA_BACST6.545e-1847.83D-hydantoinase OS=Bacillus stearothermophilus PE=1... [more]
DPYL5_HUMAN9.451e-1737.82Dihydropyrimidinase-related protein 5 OS=Homo sapi... [more]
HYDA_BURPI1.612e-1638.84D-hydantoinase OS=Burkholderia pickettii GN=hyuA P... [more]
DPYL5_RAT1.612e-1637.82Dihydropyrimidinase-related protein 5 OS=Rattus no... [more]
DPYL5_MOUSE1.612e-1637.82Dihydropyrimidinase-related protein 5 OS=Mus muscu... [more]
HYDA_RHIRD1.155e-1436.36D-hydantoinase OS=Rhizobium radiobacter GN=hyuA PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-G10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685181 ID=EY685181; Name=EY685181; organism=Citrus sinensis; type=EST; length=926bp
TGTGAATACACCTCTTTATGTTGTTCATGTCATGAGCATGGATGCAATGG
AAGAAATAGCTAAAGCTCGAAAAGCAGGGCAGAGGGTCATTGGAGAGCCG
GTAGTTTCTGGATTAGTCCTTGATGATTCTTGGCTTTGGCATTCAGATTT
TGTCACTGCTGCAAAGTATGTCATGAGTCCCCCTATTAGAGCATCAGGAC
ACAACAAGGCTCTACAAGCTGCCCTTGCAACTGGGATTTTGCAGCTTGTA
GGAACTGATCATTGTGCCTTTAATTCTACACAAAAGGCTTTTGGTATTGA
TGATTTCCGGAAGATACCAAATGGTGTGAATGGTATCGAAGAGAGGATGC
ATTTGGCCTGGGATCCACATGGTGCGCCCTGCACCCACCGCCTCTGTGGG
GGGGGGGGGGGAAGGAAACCTACAAGTCAATGGCGAAACACACAGGCACC
CTCACCCCCCGCCACACACCTATCAAAACCACGCGCCTGACACCCCGACC
GTGCCCATCGGTCAGCCAACATCTACTAGCGGCCCTCTGCACGGTCCCCC
CCACCCCAACCCCCACCCGTTCAGGCCCCGCCCGTCACGGCCAACTCGCC
AACCCGCGGCACCTTGCCTAGCTACCTGCAAGCGCGGGGAGCGCCCGCAA
CGGGGCCGCCGCACCCGACCCCTCCGGCCCCCGCCGCTCCCCCATGCCTG
GTCGCCGCGACCCCCCGCTCGGCGCCCGCCTGGACCGCCTCGGCCGCGCG
CGCCCGGCACCCGACCGCACACGCGGCAGCCCACCCGACGAAGCGAACAG
CCAACGGCCGACAATACACAGACACAGACCGCACCCCCTCCCCCTGAAAG
ACCCCACACTGCCTGGCAGCAACACCCCCCGCGATCAGTCGGCGAGGCAG
GGTGCGTGTGACGACGCGACAGAACC
back to top