EY710388

Overview
NameEY710388
Unique NameEY710388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.415e-34
Identity = 74/147 (50.34%), Postives = 91/147 (61.90%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTAT              GWCNPP+  F  ++    + +   RAG+VPV+ ++  P  KKGG+RFT+NGH
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHF-DMAEPAFLHIAQYRAGIVPVSFRR-VPCVKKGGVRFTVNGH 162          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.415e-34
Identity = 74/147 (50.34%), Postives = 91/147 (61.90%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            A G GGW +A ATFY              YGNLYSQGYGTNTAALSTALFN+G +CGSCYE++C N    CLPG+I VTAT              GWCNPP+  F  ++    + +   RAG+VPV+ ++  P  KKGG+RFT+NGH
Sbjct:   18 AAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHF-DMAEPAFLHIAQYRAGIVPVSFRR-VPCVKKGGVRFTVNGH 162          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 7.608e-34
Identity = 72/143 (50.35%), Postives = 89/143 (62.24%), Query Frame = 3
Query:  123 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            G W +A ATFY              YGNLYS GYGTNTAALST LFN+G +CGSCYE++C ND +WCLPG++ VTAT              GWCNPP+  F  ++    + +   RAG+VPV+ ++  P  KKGGIRFTINGH
Sbjct:   27 GSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHF-DMAEPAFLQIGVYRAGIVPVSYRR-VPCVKKGGIRFTINGH 167          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA7_ORYSJ (Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 6.441e-33
Identity = 75/150 (50.00%), Postives = 93/150 (62.00%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            A GGG W +A ATFY              YGNLYSQGYG N AALSTALFN+G SCG+C+EIKCVN P  +WC PG  +I++TAT              GWCNPP+  F  L+  + + +   RAG+VPV+ ++  P  KKGG+RFTING
Sbjct:   30 AYGGGEWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNSGQSCGACFEIKCVNQPGWEWCHPGSPSILITATNFCPPNYALPSDNGGWCNPPRPHF-DLAMPMFLHIAEYRAGIVPVSYRR-VPCRKKGGVRFTING 177          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.099e-32
Identity = 75/148 (50.68%), Postives = 91/148 (61.49%), Query Frame = 3
Query:  117 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC---VNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            GGGGW +A ATFY              YGNLYSQGYGTNTAALSTALFNNGLSCG+C+E++C         CLPG+++VTAT              GWCNPP+  F  +S  V   +   +AG+VPV+ ++     KKGGIRFTINGH
Sbjct:   60 GGGGWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHF-DMSQPVFQRIALFKAGIVPVSYRR-VACQKKGGIRFTINGH 205          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 9.300e-32
Identity = 67/148 (45.27%), Postives = 90/148 (60.81%), Query Frame = 3
Query:  108 HANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            +++  GGW    ATFY              YGNL+SQGYG  TAALSTALFN+G  CG+C+E++C +DP+WC+PG+I+V+AT              GWCNPP + F  L+    + +   RAG+VPV  ++  P  K GGIRFTING+
Sbjct:   25 NSDDNGGWERGHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHF-DLAEPAFLQIAQYRAGIVPVAFRR-VPCEKGGGIRFTINGN 170          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.665e-30
Identity = 70/148 (47.30%), Postives = 88/148 (59.46%), Query Frame = 3
Query:  117 GGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND-PKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            G G W    ATFY              YGNLYSQGYGT+TAALSTALFN GLSCGSCYE++C  D  + CLPG  T+ VTAT              GWCNPP++ F  L+    + +  + AG+VPV+ ++     +KGG+RFT+NGH
Sbjct:   24 GLGQWQPGHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHF-DLAEPAFLRIARHAAGIVPVSFRR-VACARKGGVRFTVNGH 169          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.533e-29
Identity = 81/195 (41.54%), Postives = 104/195 (53.33%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HFLIQP***SPNVGGG----WVKVQG*FQIKRD*NWVGKPGSKKLGGQNLANI 695
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TAT               WCNPPQ+ F  LS  + + +   +AGVVPV  ++  P  K GG++F   G  +FL+       NVGG     +V+V+G        N  G    KK  GQN   I
Sbjct:   52 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHF-DLSLAMFLKIAKYKAGVVPVRYRR-IPCSKTGGVKFETKGNPYFLMVL---IYNVGGAGDIKYVQVKG--------NKTGWITMKKNWGQNWTTI 231          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 7.369e-29
Identity = 81/188 (43.09%), Postives = 103/188 (54.79%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HFLIQP***SPNVGG-GWVKVQG*FQIKRD*NWVGKPGSKKLGGQN 683
            W +ARATFY              YGNL+ QGYG  TAALSTALFN+G +CG+CYEI C  DP+WCLPG++ +TAT               WCNPPQ+ F  LS  + + +   +AGVVPV  ++  P  K GG++F   G  +FL+       NVGG G +K     Q+K   N  G    KK  GQN
Sbjct:   58 WYDARATFYGDIHGGDTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDL--WCNPPQKHF-DLSLAMFLKIAKYKAGVVPVRYRR-IPCSKTGGVKFETKGNPYFLMVL---IYNVGGAGDIKY---VQVKE--NKTGWITMKKNWGQN 233          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.642e-28
Identity = 68/147 (46.26%), Postives = 86/147 (58.50%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HFLI 560
            GW + RATFY              YG+L+ QGYG  TAALSTALFNNG  CG+CYEI C + P+WCLPG+I +TAT               WCNPPQ+ F  LS  + + +   +AGVVPV  ++  P  K GG++F I G  HFL+
Sbjct:   89 GWGHGRATFYGDINGGETQQGACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITAT--NFCPPDFTKPNDNWCNPPQKHF-DLSQPMFLKIAKYKAGVVPVKFRR-VPCAKIGGVKFEIKGNPHFLM 231          
The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA4_ORYSJ3.415e-3450.34Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI3.415e-3450.34Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA2_ORYSJ7.608e-3450.35Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA7_ORYSJ6.441e-3350.00Expansin-A7 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA5_ORYSJ1.099e-3250.68Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA2_ARATH9.300e-3245.27Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 ... [more]
EXPA6_ORYSJ6.665e-3047.30Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP22_ARATH2.533e-2941.54Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=... [more]
EXP26_ARATH7.369e-2943.09Putative expansin-A26 OS=Arabidopsis thaliana GN=E... [more]
EXP24_ARATH1.642e-2846.26Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGCTTTCTCTACTCTGCTTCTGGGCTTCCAATTTCTCCAAG
AAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTTTCCTTGCATTGGTGTC
CTCCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCGTGCCACTT
TCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTTGTGGCTAT
GGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCCTTGAGCAC
GGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGAGATTAAGT
GTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGGTCACAGCT
ACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCATGCGGTTG
GTGCAATCCTCCGCAGCAACAATTTTGATCTCTCTCAGCCTGTGTTCCAA
TAACATTGCTCAATAACAGAGCTGGAGTTGTCCCTGTAACTTTACAAAAA
GGTACCCCTGGCGGAAAAAAGGGAGGCATCAGGTTCACAATCAATGGCCA
TTTCCTAATTCAACCATAATGATGATCTCCAAACGTTGGGGGGGGCTGGG
TGAAAGTTCAGGGCTGATTTCAAATCAAAAGGGACTAAAACTGGGTGGGG
AAACCAGGGTCAAAAAAATTGGGGGGCCAAAACTTGGCAAATATATAACC
TTTTTCTCCTTGGGGCCAAAACTTGGACCTTTTTAAGGTCCAACAAACAG
AGGAGGGGGCCGCCCGTGGGACTATCAAAAAAAGTATTCCCACAAAGAAA
ACAAGGATAATATGGGATCGAAATTTTAACACGGGCTAGACCATATTTTC
CTTTATAATAACAGCAAAAAAAACACTATAAAAAAAGATTGAGGGGATTA
AATACATCATGAATTTTTAAAGCGTCCACAAAAATTATTGTAGGAGAAAG
AAAAAAAGAGAGAAGAAATAAATTAAAGGGAAAAAAAAAGTAAATTGATA
TATTTAAACCCCACATAAAAAGAAGGAG
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