EY710388

Overview
NameEY710388
Unique NameEY710388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.800e-28
Identity = 71/151 (47.02%), Postives = 89/151 (58.94%), Query Frame = 3
Query:  108 HANGG--GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            H  GG  G WINA ATFY              YGNLYSQGYG  TAALSTALF+ GLSCG+C+E+ CVNDP+WC+ G +I+VTAT              G C+PP   F  LS  +   +   ++G++PV + +     + GGIRFTINGH
Sbjct:   29 HHPGGHMGPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTAT--------NFCPPGGACDPPNHHF-DLSQPIYEKIALYKSGIIPV-MYRRVRCKRSGGIRFTINGH 169          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP13_ORYSJ (Expansin-A13 OS=Oryza sativa subsp. japonica GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 2.800e-28
Identity = 67/149 (44.97%), Postives = 84/149 (56.38%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGHFLIQ 563
            GW+ A ATFY              YGNLY+QGYGT TAALSTALFN+GL+CG CY++ C    D  WC PG ++ +TAT              GWCNPP+  F  ++      +   R G++PV  Q+  P  KKGG+RFTINGH   Q
Sbjct:   33 GWVRAHATFYGGADASGTMGGACGYGNLYAQGYGTRTAALSTALFNDGLACGQCYKLVCDRKTDRTWCKPGVSVTITATNFCPPNWDLPSDSGGWCNPPRPHF-DMAQPAWEKIGIYRGGIIPVIYQR-VPCMKKGGVRFTINGHDYFQ 179          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 3.657e-28
Identity = 68/147 (46.26%), Postives = 82/147 (55.78%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            A G  GW +  ATFY              YGNLYS GYGT+TAALSTALFNNG SCG+C+E++C      CL GT+ VTAT              GWCNPP+  F  ++      +   RAGVVPV  ++     K+GGIRFTI GH
Sbjct:   21 AGGDSGWSSGSATFYGGSDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGS-CLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHF-DMAEPAFTRIAQARAGVVPVQYRR-VACAKQGGIRFTITGH 164          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP25_ARATH (Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 6.238e-28
Identity = 74/173 (42.77%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH---FLIQP***SPNVGG-GWVKVQG*FQIKRD 635
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CV+DP+WCLPGTI +TAT               WCNPPQ+ F  LS  + + +   +AGVVPV  ++     + GG++F   G+    +I P     NVGG G +K+    Q+K D
Sbjct:   55 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVHDPQWCLPGTIKITATNFCPPDYSKTEGV--WCNPPQKHF-DLSLPMFLKIAQYKAGVVPVKYRR-ISCARTGGVKFETKGNPYFLMILP----YNVGGAGDIKL---MQVKGD 216          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP23_ARATH (Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 6.238e-28
Identity = 73/173 (42.20%), Postives = 98/173 (56.65%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH---FLIQP***SPNVGG-GWVKVQG*FQIKRD 635
            W +ARATFY              YG+L+ QGYG  TAALSTALFN G +CG+CY+I CVNDP+WCLPG++ +TAT               WCNPPQ+ F  LS  + + +   +AGVVPV  ++     + GG++F   G+    +I P     NVGG G +K+    Q+K D
Sbjct:   48 WYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGV--WCNPPQKHF-DLSLPMFLKIAQYKAGVVPVKYRR-ISCARTGGVKFETKGNPYFLMILP----YNVGGAGDIKL---MQVKGD 209          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP22_ORYSJ (Expansin-A22 OS=Oryza sativa subsp. japonica GN=EXPA22 PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 6.238e-28
Identity = 67/144 (46.53%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            W+ A ATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TAT              GWCNPP+  F  ++      +   RAG++PV  Q+  P  KKGG+RFTINGH
Sbjct:   52 WLKAHATFYGGADASGTMGGACGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCRPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHF-DMAQPAWEKIGIYRAGIIPVIYQR-VPCVKKGGVRFTINGH 193          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 3.096e-27
Identity = 68/148 (45.95%), Postives = 81/148 (54.73%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGHFLIQ 563
            W  A ATFY              YGNLYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TAT              GWCNPP+  F  ++      +    AG++PV  Q+  P  KKGG+RFTINGH   Q
Sbjct:   39 WQKAHATFYGGADASGTMGGACGYGNLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWNLPSDNGGWCNPPRPHF-DMAQPAWEKIGVYSAGIIPVIYQR-VPCVKKGGLRFTINGHDYFQ 184          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP17_ARATH (Putative expansin-A17 OS=Arabidopsis thaliana GN=EXPA17 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 4.043e-27
Identity = 71/168 (42.26%), Postives = 90/168 (53.57%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGHFLIQP***SPNVGGG-----WVK 605
            GW+ A ATFY              YGNLY+ GY TNTAALSTALFN+G SCG CY+I C     P+WCL G +I +TAT              GWCNPP+  F  ++    +T+   +AG+VP+ L K     + GG+RFTING    +    S   GGG     W+K
Sbjct:   27 GWLQAHATFYGGSDASGTMGGACGYGNLYTDGYKTNTAALSTALFNDGKSCGGCYQILCDATKVPQWCLKGKSITITATNFCPPNFAQASDNGGWCNPPRPHF-DMAQPAFLTIAKYKAGIVPI-LYKKVGCRRSGGMRFTINGRNYFELVLISNVAGGGEISKVWIK 192          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 5.281e-27
Identity = 67/144 (46.53%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            W+ A ATFY              Y +LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ VTAT              GWCNPP+  F  ++      +   RAG++PV  Q+  P  KKGG+RFTINGH
Sbjct:   50 WLKAHATFYGGADASGTMGGACGYVDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTVTATNFCPPNWNLPSDNGGWCNPPRPHF-DMAQPAWEKIGIYRAGIIPVMYQR-VPCVKKGGVRFTINGH 191          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.831e-27
Identity = 62/142 (43.66%), Postives = 81/142 (57.04%), Query Frame = 3
Query:  132 INARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            ++  ATFY              YGNLYS GYGTNTAALS+ALFN+G +CG CY+I C  ++ KWC  GT + +TAT              GWCNPP+Q F  ++      +   R G+VPV  Q+     +KGG+RFTING+
Sbjct:   25 LSGTATFYGGSDASGTMGGACGYGNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHF-DMAQPAWEQIGVYRGGIVPVNFQR-VSCTRKGGVRFTINGN 164          

HSP 2 Score: 29.261 bits (64), Expect = 5.831e-27
Identity = 14/24 (58.33%), Postives = 15/24 (62.50%), Query Frame = 1
Query:  628 KGTKTGWGNQGQKNWGAKTWQIYN 699
            KGTKTGW     +NWGA  WQ  N
Sbjct:  187 KGTKTGWVTM-SRNWGA-NWQANN 208          
The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA5_ARATH2.800e-2847.02Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP13_ORYSJ2.800e-2844.97Expansin-A13 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ORYSJ3.657e-2846.26Expansin-A11 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP25_ARATH6.238e-2842.77Expansin-A25 OS=Arabidopsis thaliana GN=EXPA25 PE=... [more]
EXP23_ARATH6.238e-2842.20Expansin-A23 OS=Arabidopsis thaliana GN=EXPA23 PE=... [more]
EXP22_ORYSJ6.238e-2846.53Expansin-A22 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP23_ORYSJ3.096e-2745.95Expansin-A23 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP17_ARATH4.043e-2742.26Putative expansin-A17 OS=Arabidopsis thaliana GN=E... [more]
EXP24_ORYSJ5.281e-2746.53Expansin-A24 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP12_ORYSJ5.831e-2743.66Expansin-A12 OS=Oryza sativa subsp. japonica GN=EX... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGCTTTCTCTACTCTGCTTCTGGGCTTCCAATTTCTCCAAG
AAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTTTCCTTGCATTGGTGTC
CTCCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCGTGCCACTT
TCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTTGTGGCTAT
GGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCCTTGAGCAC
GGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGAGATTAAGT
GTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGGTCACAGCT
ACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCATGCGGTTG
GTGCAATCCTCCGCAGCAACAATTTTGATCTCTCTCAGCCTGTGTTCCAA
TAACATTGCTCAATAACAGAGCTGGAGTTGTCCCTGTAACTTTACAAAAA
GGTACCCCTGGCGGAAAAAAGGGAGGCATCAGGTTCACAATCAATGGCCA
TTTCCTAATTCAACCATAATGATGATCTCCAAACGTTGGGGGGGGCTGGG
TGAAAGTTCAGGGCTGATTTCAAATCAAAAGGGACTAAAACTGGGTGGGG
AAACCAGGGTCAAAAAAATTGGGGGGCCAAAACTTGGCAAATATATAACC
TTTTTCTCCTTGGGGCCAAAACTTGGACCTTTTTAAGGTCCAACAAACAG
AGGAGGGGGCCGCCCGTGGGACTATCAAAAAAAGTATTCCCACAAAGAAA
ACAAGGATAATATGGGATCGAAATTTTAACACGGGCTAGACCATATTTTC
CTTTATAATAACAGCAAAAAAAACACTATAAAAAAAGATTGAGGGGATTA
AATACATCATGAATTTTTAAAGCGTCCACAAAAATTATTGTAGGAGAAAG
AAAAAAAGAGAGAAGAAATAAATTAAAGGGAAAAAAAAAGTAAATTGATA
TATTTAAACCCCACATAAAAAGAAGGAG
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