EY710388

Overview
NameEY710388
Unique NameEY710388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 1.176e-26
Identity = 68/145 (46.90%), Postives = 82/145 (56.55%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF-*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            W  A ATFY              YG+LYSQGYGT  AALSTALFN+G SCG CY+I C     P+WC PG T+ +TAT              GWCNPP+  F  +  A   I + +  AG++PV  Q+  P  KKGG+RFTINGH
Sbjct:   34 WQKAHATFYGGADASGTMGGGCGYGDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYS--AGIIPVIYQR-VPCIKKGGVRFTINGH 175          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 3.423e-26
Identity = 78/196 (39.80%), Postives = 97/196 (49.49%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGHFLIQP***SPNVGGG------WVKVQG*FQIKRD*NW-VGKPGSKKLGGQNLA 689
            W  A ATFY              YG+LY  GYGT TAALSTALFN G SCG+C+ I C     +WC PGT I VTAT              GWCNPP++ F  +S     T+   RAG+VPV  ++  P  + GGIRF +NGH   +      NVGG       W+K  G   +    NW      + +L GQ L+
Sbjct:   25 WTPAFATFYGGSDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFCPPNYALSGDAGGWCNPPRRHF-DMSQPAWETIAVYRAGIVPVNYRR-VPCQRSGGIRFAVNGHSYFEL-VLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALS 217          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.301e-25
Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GW +  ATFY              YGNLY  GYGTNTAALS+ALFN+G SCG CY+I C +  +P+WCL G T+ +T T              GWCNPP+  F  ++    + +   +AG+VPV  Q+  P  K+GG+RFT+ G
Sbjct:   31 GWSSGTATFYGGSDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHF-DMAEPAWLQIGIYKAGIVPVLYQR-VPCVKQGGVRFTMGG 172          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.943e-25
Identity = 64/149 (42.95%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            A   GGW++  ATFY              YGNLY+QGYG   AALSTALFN G SCG CY I C     P+WC  GT + +TAT              GWCNPP+  F  +S     T+   RAG+VPV  Q+     ++GG+RFT++G
Sbjct:   21 AAAAGGWVSGTATFYGGKDASGTMGGACGYGNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHF-DMSQPAWETIGIYRAGIVPVLYQQ-VKCWRQGGVRFTVSG 167          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 8.431e-25
Identity = 64/144 (44.44%), Postives = 80/144 (55.56%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GW  A ATFY              YG+LYS GYGTNTAALST LFN+G SCG CY I C    D ++C+ GT + +TAT              GWCNPP+Q F  ++    + +     G+VPV  Q+  P  K+GG+RFTING
Sbjct:   33 GWNKAFATFYGGSDASGTMGGACGYGDLYSTGYGTNTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGTSVTITATNLCPPNYALPNDAGGWCNPPRQHF-DMAEPAWLKIGVYVGGIVPVMYQR-VPCAKQGGVRFTING 174          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.204e-24
Identity = 63/142 (44.37%), Postives = 77/142 (54.23%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            W  A ATFY              YGNLY+ GYG N AALS+ALFN+G  CG+CY I C  +   WC PGT I +TAT              GWCNPP++ F  +S     ++   +AG+VPV   K  P  K GGIRFTI+G
Sbjct:   23 WTPATATFYGGSDGAGTMGGACGYGNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHF-DMSQPAWTSIAIYQAGIVPVNF-KRVPCQKSGGIRFTISG 162          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 3.204e-24
Identity = 63/155 (40.65%), Postives = 84/155 (54.19%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC----VNDPKWCLP----GTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            A   G W +A ATFY              YGN Y QGYGT+TAALS  +F +GLSCG+C+E++C      D + CLP     +I+VTAT              GWCNPP   F  LS    + +   ++G+VPV+ ++     +KGG+RFTINGH
Sbjct:   24 AAAAGRWTDAHATFYGGADASGTMGGACGYGNTYGQGYGTDTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHF-DLSQPAFLRIARFQSGIVPVSYRR-VACRRKGGMRFTINGH 176          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.322e-24
Identity = 61/149 (40.94%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  111 ANGGGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            A    GW    ATFY              YGNLY+QGYGT TAALSTALF++G SCG CY + C    DP+WC  G ++ VTAT              GWCNPP+  F  ++      +   R G+VPV  ++  P  ++GG+RFT+ G
Sbjct:   28 AFAASGWSKGTATFYGGSDASGTMGGACGYGNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHF-DMAQPAWERIGVYRGGIVPVAFRR-VPCRRRGGVRFTVAG 174          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.077e-23
Identity = 63/144 (43.75%), Postives = 77/144 (53.47%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            G  N  ATFY              YG+LYS GYGT TAALSTALFN+G SCG CY I C    D +WCL G ++++TAT              GWCNPP + F  ++      +   R G+VPV  Q+     KKGG+RF ING
Sbjct:   25 GLTNGHATFYGGSDASGTMGGACGYGDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHF-DMAQPAWEKIGIYRGGIVPVVFQR-VSCYKKGGVRFRING 166          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 4.626e-23
Identity = 64/147 (43.54%), Postives = 78/147 (53.06%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HF 554
            WI A ATFY              YGNLY QGYG   AALSTALFN+G +CG CY I C  D   +WC P G + VTAT              GWCNPP++ F  +S      +   RAG+VPV L +     ++GG+RFT+ G  HF
Sbjct:   27 WIPATATFYGGNDGSGTMGGACGYGNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHF-DMSQPAWERIGVYRAGIVPV-LYRRVRCWRRGGVRFTVGGFDHF 171          
The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXP14_ORYSJ1.176e-2646.90Expansin-A14 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA8_ORYSJ3.423e-2639.80Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP15_ORYSJ1.301e-2543.06Expansin-A15 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP28_ORYSJ4.943e-2542.95Expansin-A28 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXPA1_ORYSJ8.431e-2544.44Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP33_ORYSJ3.204e-2444.37Expansin-A33 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP21_ORYSJ3.204e-2440.65Expansin-A21 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP29_ORYSJ9.322e-2440.94Expansin-A29 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP11_ARATH2.077e-2343.75Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=... [more]
EXP27_ORYSJ4.626e-2343.54Putative expansin-A27 OS=Oryza sativa subsp. japon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGCTTTCTCTACTCTGCTTCTGGGCTTCCAATTTCTCCAAG
AAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTTTCCTTGCATTGGTGTC
CTCCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCGTGCCACTT
TCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTTGTGGCTAT
GGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCCTTGAGCAC
GGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGAGATTAAGT
GTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGGTCACAGCT
ACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCATGCGGTTG
GTGCAATCCTCCGCAGCAACAATTTTGATCTCTCTCAGCCTGTGTTCCAA
TAACATTGCTCAATAACAGAGCTGGAGTTGTCCCTGTAACTTTACAAAAA
GGTACCCCTGGCGGAAAAAAGGGAGGCATCAGGTTCACAATCAATGGCCA
TTTCCTAATTCAACCATAATGATGATCTCCAAACGTTGGGGGGGGCTGGG
TGAAAGTTCAGGGCTGATTTCAAATCAAAAGGGACTAAAACTGGGTGGGG
AAACCAGGGTCAAAAAAATTGGGGGGCCAAAACTTGGCAAATATATAACC
TTTTTCTCCTTGGGGCCAAAACTTGGACCTTTTTAAGGTCCAACAAACAG
AGGAGGGGGCCGCCCGTGGGACTATCAAAAAAAGTATTCCCACAAAGAAA
ACAAGGATAATATGGGATCGAAATTTTAACACGGGCTAGACCATATTTTC
CTTTATAATAACAGCAAAAAAAACACTATAAAAAAAGATTGAGGGGATTA
AATACATCATGAATTTTTAAAGCGTCCACAAAAATTATTGTAGGAGAAAG
AAAAAAAGAGAGAAGAAATAAATTAAAGGGAAAAAAAAAGTAAATTGATA
TATTTAAACCCCACATAAAAAGAAGGAG
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