EY710388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 6.042e-23 Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH-----FLIQP***SPNVGGGWVKVQG*FQIKRD*NW 644 W +A ATFY YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C + +WC GT + VTAT GWCNPP++ F +S + +G+VPV + TP + GGIRF I GH L+ S V WVK G + NW Sbjct: 27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHF-DMSQPAWEAIAVYSSGIVPVRYAR-TPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNW 203
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 2.296e-22 Identity = 61/142 (42.96%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 135 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551 +A ATFY YGNLY+ GYG AALS+ALFN+G CG+CY I C + KWC PG +I +TAT GWCNPP+Q F +S + +AG+VPV K P + GGIRF I+GH Sbjct: 30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHF-DMSQPAWENIAVYQAGIVPVN-YKRVPCQRSGGIRFAISGH 169
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 5.115e-22 Identity = 58/144 (40.28%), Postives = 76/144 (52.78%), Query Frame = 3 Query: 126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 GW ATFY YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C P+WC G + +TAT GWCNPP+ F ++ + + +AG++PV Q+ ++GGIRFT+ G Sbjct: 26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHF-DMAEPAWLQIGIYKAGIIPVLYQQ-VKCWRQGGIRFTMGG 167
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.488e-21 Identity = 58/154 (37.66%), Postives = 78/154 (50.65%), Query Frame = 3 Query: 108 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551 H N G G W A ATFY Y + +GYG T A+ST LF G CG+CYE+KCV+ P C G ++VTAT GWCNPP++ F LS + + +AG+VP++ ++ P K GGIR+TI G+ Sbjct: 31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHF-DLSMPAFLQIAQEKAGIVPISYRR-VPCVKVGGIRYTITGN 182
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 1.488e-21 Identity = 70/180 (38.89%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HF---LIQP***SPNVGGGWVKVQG*FQIKRD*NW 644 W A ATFY YGNLY QGYG + AALS ALFN+G SCG CY I C P+WC GT + VTAT GWCNPP+ F +S + +AG+VPV Q+ ++GG+RFT+ G +F LI S +V W+K I+ NW Sbjct: 28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHF-DMSQPAWEQIGVYQAGIVPVLYQR-VRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNW 205
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 9.646e-21 Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 3 Query: 120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTI--NGHFLI 560 G W A ATFY YGN+Y GYG T ALSTALFN G +CG C+++KCV+ P C G+ +VTAT GWCNPP+ F L+ + + N +AG++PV+ ++ K GGIRF NG++L+ Sbjct: 28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHF-DLTKPAFMKIANWKAGIIPVSYRR-VACKKIGGIRFKFEGNGYWLL 175
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.260e-20 Identity = 71/198 (35.86%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTAT--XXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH-----FLIQP***SPNVGGGWVKV-QG*FQIKRD*NW-VGKPGSKKLGGQNLA 689 W A ATFY YGNLY+ GYGT+TAALST LF +G CG+CY+++CV C G+ I VTAT GWCNPP+ F LS + + + RAG+VPV + + P + GG+RF + G+ + + +VG WVK G ++ NW +LGGQ L+ Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHF-DLSKPAFMRMADWRAGIVPV-MYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALS 231
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 6.253e-20 Identity = 53/143 (37.06%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 123 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551 G W A ATFY YGNL++ GYG +TAALST LFN+G CG C++I C P + +VTAT GWCNPP+ F ++ + L RAG++PV ++ P + GG+RF G+ Sbjct: 35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHF-DMAKPAFMKLAYWRAGIIPVAYRR-VPCQRSGGMRFQFQGN 175
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 9.335e-20 Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNN----RAGVVPVTLQKGTPGGKKGGIRFTING 548 W +A+A++Y +G+L GYG T LSTALF G +CG CYE+KCV+D K+CLPGT I+VTAT G CNPP F +PI +AGV+P+ ++ + GG+RF + G Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHF-----LLPIQSFEKIALWKAGVMPIQYRR-VNCLRDGGVRFAVAG 170 HSP 2 Score: 28.4906 bits (62), Expect = 9.335e-20 Identity = 17/43 (39.53%), Postives = 25/43 (58.14%), Query Frame = 1 Query: 577 LQTLGGAG*KFRADFKSKGTKTGWGNQGQKNWGAKTWQIYNLF 705 + +GGAG K KGT++GW + G +NWG + W I + F Sbjct: 179 ISNVGGAGDV--RSVKIKGTESGWLSMG-RNWG-QIWHINSDF 217
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 1.213e-19 Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNN----RAGVVPVTLQKGTPGGKKGGIRFTING 548 W ARAT+Y YG+L GYG T LS LF G CG+C+E++CV+D +WC+PGT I++TAT G CNPP + F +PI +AG +PV ++ K+G +RFT++G Sbjct: 40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHF-----VLPIEAFEKIAIWKAGNMPVQYRR-INCRKEGSMRFTVDG 178 HSP 2 Score: 26.5646 bits (57), Expect = 1.213e-19 Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 613 ADFKSKGTKTGWGNQGQKNWGAKTWQI 693 A K KG++TGW G +NWG + W I Sbjct: 197 AAVKIKGSRTGWLPMG-RNWG-QNWHI 221 The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bpback to top |