EY710388

Overview
NameEY710388
Unique NameEY710388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 6.042e-23
Identity = 68/179 (37.99%), Postives = 88/179 (49.16%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH-----FLIQP***SPNVGGGWVKVQG*FQIKRD*NW 644
            W +A ATFY              YGN+YS GYGTNT ALS+AL+ +G SCG+CY + C  +  +WC  GT + VTAT              GWCNPP++ F  +S      +    +G+VPV   + TP  + GGIRF I GH      L+     S  V   WVK  G   +    NW
Sbjct:   27 WTSATATFYGGSDASGTMGGSCGYGNMYSAGYGTNTTALSSALYGDGASCGACYLVTCDASATRWCKNGTSVTVTATNYCPPNYSESGDAGGWCNPPRRHF-DMSQPAWEAIAVYSSGIVPVRYAR-TPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNW 203          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.296e-22
Identity = 61/142 (42.96%), Postives = 76/142 (53.52%), Query Frame = 3
Query:  135 NARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            +A ATFY              YGNLY+ GYG   AALS+ALFN+G  CG+CY I C  +  KWC PG  +I +TAT              GWCNPP+Q F  +S      +   +AG+VPV   K  P  + GGIRF I+GH
Sbjct:   30 SAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHF-DMSQPAWENIAVYQAGIVPVN-YKRVPCQRSGGIRFAISGH 169          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 5.115e-22
Identity = 58/144 (40.28%), Postives = 76/144 (52.78%), Query Frame = 3
Query:  126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548
            GW    ATFY              YGNLY+ GYGTNTAALS+ LFN+G SCG CY I C     P+WC  G  + +TAT              GWCNPP+  F  ++    + +   +AG++PV  Q+     ++GGIRFT+ G
Sbjct:   26 GWNKGTATFYGGADASGTMGGACGYGNLYTAGYGTNTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAGAAVTITATNLCPPNWALPSNSGGWCNPPRPHF-DMAEPAWLQIGIYKAGIIPVLYQQ-VKCWRQGGIRFTMGG 167          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.488e-21
Identity = 58/154 (37.66%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  108 HANGG----GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            H N G    G W  A ATFY              Y +   +GYG  T A+ST LF  G  CG+CYE+KCV+ P  C  G   ++VTAT              GWCNPP++ F  LS    + +   +AG+VP++ ++  P  K GGIR+TI G+
Sbjct:   31 HRNHGKFTAGPWKQAHATFYGGRDGSGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHF-DLSMPAFLQIAQEKAGIVPISYRR-VPCVKVGGIRYTITGN 182          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.488e-21
Identity = 70/180 (38.89%), Postives = 88/180 (48.89%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HF---LIQP***SPNVGGGWVKVQG*FQIKRD*NW 644
            W  A ATFY              YGNLY QGYG + AALS ALFN+G SCG CY I C     P+WC  GT + VTAT              GWCNPP+  F  +S      +   +AG+VPV  Q+     ++GG+RFT+ G  +F   LI     S +V   W+K      I+   NW
Sbjct:   28 WSPATATFYGGSDGSGTMGGACGYGNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHF-DMSQPAWEQIGVYQAGIVPVLYQR-VRCWRQGGVRFTVAGLNYFELVLITNVAGSGSVASAWIKGTNTGWIQMSRNW 205          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 9.646e-21
Identity = 59/151 (39.07%), Postives = 80/151 (52.98%), Query Frame = 3
Query:  120 GGGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTI--NGHFLI 560
            G  W  A ATFY              YGN+Y  GYG  T ALSTALFN G +CG C+++KCV+ P  C  G+   +VTAT              GWCNPP+  F  L+    + + N +AG++PV+ ++     K GGIRF    NG++L+
Sbjct:   28 GTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHF-DLTKPAFMKIANWKAGIIPVSYRR-VACKKIGGIRFKFEGNGYWLL 175          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.260e-20
Identity = 71/198 (35.86%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTAT--XXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH-----FLIQP***SPNVGGGWVKV-QG*FQIKRD*NW-VGKPGSKKLGGQNLA 689
            W  A ATFY              YGNLY+ GYGT+TAALST LF +G  CG+CY+++CV     C  G+  I VTAT                GWCNPP+  F  LS    + + + RAG+VPV + +  P  + GG+RF + G+       +     + +VG  WVK   G   ++   NW        +LGGQ L+
Sbjct:   37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHF-DLSKPAFMRMADWRAGIVPV-MYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALS 231          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.253e-20
Identity = 53/143 (37.06%), Postives = 72/143 (50.35%), Query Frame = 3
Query:  123 GGWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551
            G W  A ATFY              YGNL++ GYG +TAALST LFN+G  CG C++I C   P      + +VTAT              GWCNPP+  F  ++    + L   RAG++PV  ++  P  + GG+RF   G+
Sbjct:   35 GPWRYAHATFYGDETGGETMGGACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHF-DMAKPAFMKLAYWRAGIIPVAYRR-VPCQRSGGMRFQFQGN 175          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.335e-20
Identity = 54/145 (37.24%), Postives = 74/145 (51.03%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNN----RAGVVPVTLQKGTPGGKKGGIRFTING 548
            W +A+A++Y              +G+L   GYG  T  LSTALF  G +CG CYE+KCV+D K+CLPGT I+VTAT              G CNPP   F      +PI         +AGV+P+  ++     + GG+RF + G
Sbjct:   33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHF-----LLPIQSFEKIALWKAGVMPIQYRR-VNCLRDGGVRFAVAG 170          

HSP 2 Score: 28.4906 bits (62), Expect = 9.335e-20
Identity = 17/43 (39.53%), Postives = 25/43 (58.14%), Query Frame = 1
Query:  577 LQTLGGAG*KFRADFKSKGTKTGWGNQGQKNWGAKTWQIYNLF 705
            +  +GGAG       K KGT++GW + G +NWG + W I + F
Sbjct:  179 ISNVGGAGDV--RSVKIKGTESGWLSMG-RNWG-QIWHINSDF 217          
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.213e-19
Identity = 52/145 (35.86%), Postives = 73/145 (50.34%), Query Frame = 3
Query:  129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNN----RAGVVPVTLQKGTPGGKKGGIRFTING 548
            W  ARAT+Y              YG+L   GYG  T  LS  LF  G  CG+C+E++CV+D +WC+PGT I++TAT              G CNPP + F      +PI         +AG +PV  ++     K+G +RFT++G
Sbjct:   40 WRPARATYYAATNPRDAVGGACGYGDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHF-----VLPIEAFEKIAIWKAGNMPVQYRR-INCRKEGSMRFTVDG 178          

HSP 2 Score: 26.5646 bits (57), Expect = 1.213e-19
Identity = 13/27 (48.15%), Postives = 17/27 (62.96%), Query Frame = 1
Query:  613 ADFKSKGTKTGWGNQGQKNWGAKTWQI 693
            A  K KG++TGW   G +NWG + W I
Sbjct:  197 AAVKIKGSRTGWLPMG-RNWG-QNWHI 221          
The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
EXPA9_ORYSJ6.042e-2337.99Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA3_ORYSJ2.296e-2242.96Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXP25_ORYSJ5.115e-2240.28Expansin-A25 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP32_ORYSJ1.488e-2137.66Expansin-A32 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP31_ORYSJ1.488e-2138.89Expansin-A31 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP18_ARATH9.646e-2139.07Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=... [more]
EXP30_ORYSJ1.260e-2035.86Putative expansin-A30 OS=Oryza sativa subsp. japon... [more]
EXPA7_ARATH6.253e-2037.06Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 ... [more]
EXP10_ORYSJ9.335e-2037.24Expansin-A10 OS=Oryza sativa subsp. japonica GN=EX... [more]
EXP13_ARATH1.213e-1935.86Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-D09-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGCTTTCTCTACTCTGCTTCTGGGCTTCCAATTTCTCCAAG
AAAATGTATTTTGCTGGGTTTTTCTCGTTGGGTTTCCTTGCATTGGTGTC
CTCCGTTCATGCTAATGGAGGCGGTGGGTGGATCAATGCTCGTGCCACTT
TCTATGGTGGTGGCGATGCTTCAGGGACTATGGGTGGGGCTTGTGGCTAT
GGGAATCTGTATAGCCAGGGTTATGGAACGAACACTGCAGCCTTGAGCAC
GGCTTTGTTCAACAACGGTTTGAGCTGTGGGTCTTGCTATGAGATTAAGT
GTGTTAATGACCCCAAATGGTGCTTGCCCGGCACCATTATGGTCACAGCT
ACCAATTTTTGCCCACCGAACAACGCCCTCCCCAACAATGCATGCGGTTG
GTGCAATCCTCCGCAGCAACAATTTTGATCTCTCTCAGCCTGTGTTCCAA
TAACATTGCTCAATAACAGAGCTGGAGTTGTCCCTGTAACTTTACAAAAA
GGTACCCCTGGCGGAAAAAAGGGAGGCATCAGGTTCACAATCAATGGCCA
TTTCCTAATTCAACCATAATGATGATCTCCAAACGTTGGGGGGGGCTGGG
TGAAAGTTCAGGGCTGATTTCAAATCAAAAGGGACTAAAACTGGGTGGGG
AAACCAGGGTCAAAAAAATTGGGGGGCCAAAACTTGGCAAATATATAACC
TTTTTCTCCTTGGGGCCAAAACTTGGACCTTTTTAAGGTCCAACAAACAG
AGGAGGGGGCCGCCCGTGGGACTATCAAAAAAAGTATTCCCACAAAGAAA
ACAAGGATAATATGGGATCGAAATTTTAACACGGGCTAGACCATATTTTC
CTTTATAATAACAGCAAAAAAAACACTATAAAAAAAGATTGAGGGGATTA
AATACATCATGAATTTTTAAAGCGTCCACAAAAATTATTGTAGGAGAAAG
AAAAAAAGAGAGAAGAAATAAATTAAAGGGAAAAAAAAAGTAAATTGATA
TATTTAAACCCCACATAAAAAGAAGGAG
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