EY710388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 5.293e-19 Identity = 58/143 (40.56%), Postives = 68/143 (47.55%), Query Frame = 3 Query: 126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 GW+ ATFY YGNLY QGYG N AALST LFNNG SCG CY I C D P C GT +T T GWCN + F +S + AG+VP+ Q+ + GG+RFTI G Sbjct: 22 GWLQGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLPYGGWCNTTRPHF-DMSQPAWENIGIYSAGIVPILYQQ-VKCWRSGGVRFTITG 161
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18 Identity = 55/142 (38.73%), Postives = 75/142 (52.82%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551 W +ARA +Y YG+L GYG TAALSTALFN+G SCG+CYEI C +P+ CL G+I +TAT WC P + F LS + I + +A +VPV ++ P K GG++F + G+ Sbjct: 45 WYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITAT-------DLCPPGSAWCYLPNKHF-DLSLPMFIKIAQVKAKMVPVRYRR-VPCAKTGGVKFEVKGN 177
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.627e-18 Identity = 58/143 (40.56%), Postives = 69/143 (48.25%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGTIMVTATXXXXXXXXXXXXXXGWCNPPQQQF-*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 W+ ATFY YGNLY QGYG N AALST LFN+G SCG CY I C P WC G +T T GWCN + F S A I + N AG++P+ Q+ + GG+RFTING Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLPYGGWCNATRPHFDMSQPAWENIGIYN--AGIIPILYQQ-VKCWRYGGVRFTING 161
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.693e-18 Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 198 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 YG+L YG TA +S ALF G +CG CYE++CVN WCL G T++VTAT GWCN P++ F +S + + +A +VPV ++ + GG+RFTI G Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHF-EMSEAAFLRVAKAKADIVPVQFRR-VSCDRAGGMRFTITG 173 HSP 2 Score: 26.9498 bits (58), Expect = 3.693e-18 Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 1 Query: 613 ADFKSKGTKTGWGNQGQKNWGAKTWQ 690 A K KG++TGW G +NWG + WQ Sbjct: 192 AAVKVKGSRTGWIPMG-RNWG-QNWQ 215
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.481e-18 Identity = 54/144 (37.50%), Postives = 70/144 (48.61%), Query Frame = 3 Query: 126 GWINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 GWI A AT+Y Y N Y G+G +TAALS LF +G SCG CY+++C DPKWCL G + VTAT GWCN P+ F S G+VPV ++ ++GG+RFT+ G Sbjct: 26 GWIRAHATYYGVNDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTAT-----NFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRR-VGCKRRGGVRFTMRG 163
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 1.220e-15 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 3 Query: 222 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTINGH 551 Y T TAALST LF +G CG CYE++CV P WC PG ++++T T GWCNPP+ F ++ + L AG+VPV ++ P + GG+RF + G+ Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHF-DMAPPSFLKLAQRVAGIVPVQYRR-VPCQRTGGVRFCLQGN 193
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.594e-15 Identity = 56/143 (39.16%), Postives = 66/143 (46.15%), Query Frame = 3 Query: 129 WINARATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING 548 W+ ATFY YGNLY Q YG N AALST LFN+G SCG CY I C P WC G I VT T GWCN + F +S + AG+VP+ Q+ + GG+RF ING Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGT-----------NYGGWCNATRPYF-DMSQPAWENIGIYSAGIVPILYQQ-VKCWRYGGVRFIING 152
BLAST of EY710388 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 3.550e-15 Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = 3 Query: 198 YGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATXXXXXXXXXXXXXXGWCNPPQQQF*SLSACVPITLLNNRAGVVPVTLQKGTPGGKKGGIRFTING--HF 554 YG+L + +A LS LFN G SCG+C E++CVN +WCL G +++VTAT GWCN P++ LS + RA ++P+ ++ G++GG+RF+++G HF Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHL-ELSHAAFTGIAETRAEMIPIQYRR-VKCGRRGGLRFSLSGSSHF 173 The following BLAST results are available for this feature:
BLAST of EY710388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >EY710388 ID=EY710388; Name=EY710388; organism=Citrus sinensis; type=EST; length=1028bpback to top |