EY685167

Overview
NameEY685167
Unique NameEY685167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685167 vs. ExPASy Swiss-Prot
Match: TAOK3_MOUSE (Serine/threonine-protein kinase TAO3 OS=Mus musculus GN=Taok3 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 3
Query:    6 FWMAPEVINNKNKG-YGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDA-QDFIKQCVQVNPNDRPTAAQLLDHPFVKR 290
            +WMAPEVI   ++G Y    DIWSLG T +E+   + P   M  M+AL+ I +   P +      D+ + F+  C+   P +RP A +LL H F++R
Sbjct:  183 YWMAPEVILAMDEGQYDGKVDIWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSREWTDSFRRFVDYCLHKIPQERPAAVELLRHDFIRR 279          
BLAST of EY685167 vs. ExPASy Swiss-Prot
Match: NAK1_SCHPO (Serine/threonine-protein kinase nak1 OS=Schizosaccharomyces pombe GN=nak1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 3
Query:    6 FWMAPEVINNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPDSLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVKR 290
            +WMAPEVI +  + Y + ADIWSLG T  E+ T   P+A  +   A++ I   +PP +  + S   ++FI  C+Q  P  R  +++LL   F+K+
Sbjct:  173 YWMAPEVIRDGQE-YNVMADIWSLGITAYEIATGSPPHAKEDPFRAVYLIAHTAPPRLNGNFSALLKEFIASCLQDVPQRRLDSSELLKSKFIKQ 266          
BLAST of EY685167 vs. ExPASy Swiss-Prot
Match: MINK1_HUMAN (Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11
Identity = 41/98 (41.84%), Postives = 49/98 (50.00%), Query Frame = 3
Query:    6 FWMAPEVI---NNKNKGYGLPADIWSLGCTVLEMLTSQIPYAPMECMAALFKIGRGSPPPIPD-SLSKDAQDFIKQCVQVNPNDRPTAAQLLDHPFVK 287
            +WMAPEVI    N +  Y   +DIWSLG T +EM     P   M  M ALF I R  PP +     SK   DFI  C+      RP   QLL  PF++
Sbjct:  193 YWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFIDFIDTCLIKTYLSRPPTEQLLKFPFIR 290          
The following BLAST results are available for this feature:
BLAST of EY685167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
TAOK3_MOUSE8.887e-1137.11Serine/threonine-protein kinase TAO3 OS=Mus muscul... [more]
NAK1_SCHPO8.887e-1136.84Serine/threonine-protein kinase nak1 OS=Schizosacc... [more]
MINK1_HUMAN8.887e-1141.84Misshapen-like kinase 1 OS=Homo sapiens GN=MINK1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-F02-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685167 ID=EY685167; Name=EY685167; organism=Citrus sinensis; type=EST; length=852bp
CTGCATTCTGGATGGCCCCAGAGGTTATTAATAATAAGAACAAAGGTTAT
GGGCTTCCAGCTGATATATGGAGCCTTGGCTGCACTGTGTTGGAGATGTT
AACCAGTCAAATTCCGTATGCTCCTATGGAATGTATGGCGGCATTGTTCA
AGATTGGAAGGGGTTCACCACCACCTATTCCTGATAGTCTCTCAAAAGAT
GCTCAGGATTTTATCAAGCAATGTGTACAAGTTAATCCAAATGATCGTCC
CACTGCAGCTCAGCTCTTAGACCACCCATTTGTTAAGAGACTACTTGCCA
CAAACTCAGGCTCAGCATCTCCTTATCTAGGTAGACGGTGAGGTACATAT
CAATTGTTACATTACATTTCAGTACTTTTCCTGTTGCTGCGCTCTCCGTA
AGGCTGGAAAGAACAGCTAACACTGTGGGCGTCAGTGCTTCTATTTATAC
ACTGTAACGCCTCCCAGCCGCATCAGGCTCCACCGGGAGATGCACAAATC
CCCCCCCCACGCTCTCGATTGACACCCCACACGCGCCCGGGGGCCCCGCA
GCCCCCCGTACCCAAACATACGGGCCCTACGGGCGACCTGGAAACTCGCT
CTAGGGGAACGACGCAAACCACACTTACCCACAGTACACTCGCCCACGTG
ATTACAAAGTCGATCCCTCGGCACACCCACGTACCCGAGCATGCCCCTGA
ACATGCATACACTGAGCAAAGAACAGCCAACAGCCCGCAGGAGGCGGCTC
GCGCCCCCAACGCCGGCTATGCACCCAGCTAACGCACCTAGGGCGAGTCT
CGACGCTACACACGCCCCTCTCACACACAAACCCGACTCCCACGCAAAGC
CA
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