EY685163

Overview
NameEY685163
Unique NameEY685163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1005
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2A_HUMAN (Myocyte-specific enhancer factor 2A OS=Homo sapiens GN=MEF2A PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2A_CHICK (Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2A_BOVIN (Myocyte-specific enhancer factor 2A OS=Bos taurus GN=MEF2A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 5.354e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2C_MOUSE (Myocyte-specific enhancer factor 2C OS=Mus musculus GN=Mef2c PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2C_HUMAN (Myocyte-specific enhancer factor 2C OS=Homo sapiens GN=MEF2C PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2C_BOVIN (Myocyte-specific enhancer factor 2C OS=Bos taurus GN=MEF2C PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.992e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   +L++++S++M K L +Y  Y E  +   N
Sbjct:    1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 9.132e-16
Identity = 38/74 (51.35%), Postives = 56/74 (75.68%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTE 342
            M R KI ++KI N+ +RQ TF+KR+NG++KKA ELS+LCD E+A+I+FS   +L+++SS +M K L RY   T+
Sbjct:    3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRYTDNTD 76          
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 9.132e-16
Identity = 39/81 (48.15%), Postives = 60/81 (74.07%), Query Frame = 1
Query:  121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 363
            M R KIQ+ +I +  +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+   RL++++S++M + L +Y  Y+E  +   N
Sbjct:    1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKYTEYSEPHESRTN 81          
The following BLAST results are available for this feature:
BLAST of EY685163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
MEF2A_HUMAN5.354e-1648.15Myocyte-specific enhancer factor 2A OS=Homo sapien... [more]
MEF2A_CHICK5.354e-1648.15Myocyte-specific enhancer factor 2A OS=Gallus gall... [more]
MEF2A_BOVIN5.354e-1648.15Myocyte-specific enhancer factor 2A OS=Bos taurus ... [more]
MEF2C_PONAB6.992e-1648.15Myocyte-specific enhancer factor 2C OS=Pongo abeli... [more]
MEF2C_PIG6.992e-1648.15Myocyte-specific enhancer factor 2C OS=Sus scrofa ... [more]
MEF2C_MOUSE6.992e-1648.15Myocyte-specific enhancer factor 2C OS=Mus musculu... [more]
MEF2C_HUMAN6.992e-1648.15Myocyte-specific enhancer factor 2C OS=Homo sapien... [more]
MEF2C_BOVIN6.992e-1648.15Myocyte-specific enhancer factor 2C OS=Bos taurus ... [more]
SRFC_DICDI9.132e-1651.35Serum factor response C OS=Dictyostelium discoideu... [more]
MEF2B_HUMAN9.132e-1648.15Myocyte-specific enhancer factor 2B OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-E09-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685163 ID=EY685163; Name=EY685163; organism=Citrus sinensis; type=EST; length=1005bp
CTTTCTTCTTGCCTCTCCATTTTTGTAGAATTTTCTGTTTGGTTTCTGGG
TTGAAATTTTTTTATCTAGAAAAATTTCTGCACGAAAATCTGTTGTCCGG
GTACTTCCCAAATACTGGCCATGGTGAGGGGAAAAATTCAGATGAAGAAA
ATAGAGAATGATACAAGCCGGCAAGTGACATTTTCAAAGCGTCGAAATGG
GATGTTGAAGAAGGCTTACGAGCTTTCGGTTCTTTGCGATGCTGAAGTTG
CTGTTATTATCTTCTCACAGAAAGGAAGGCTCTATGAGTTTTCAAGTTCT
GAAATGCAAAAGACGTTAGAACGATACTATAGATACACAGAAGAAAGGCA
AATTGACAGGAATGGAATGGAGCGATACATGCAGCAATTGAAGCATGAGA
TAGCGAATATGATTGAGAAGATCCAGCATATTGAAGTTTCTCACCGGAAG
CTTTTAGGACAGGACCTGCGTTCCCGTACCCACGAGCAACACCGCCACCT
CGACCACCAGCTCGAACCACCCTTGCAGCAGACATCCCCCACCATCGGAC
CCGACTGCTGTTACAAACATGGTGCGCATTTACAAAAAGGGAGGAAAGAC
CGCAGCCAAACACGAACACACCCCATGATCTGCAGTCGAGAAAACGCCAA
ATAGCCCACACCCCACCCCACCCGCACGCACCCCGACTCCTACGCGGCGG
TAACACGGCTTGACGCCTCGCCCCTGACTACACGCCAGTCCACTGATCCC
ACCCCGACAATCGCCTCCCTCAATGCCAACCCCTCCTGAGCACCCACCCA
CCTCCCATCGCATCCCTATTTATCCGCGCGTACCCTCCGCCCAGCACCCC
ACCTCCATACCCTACCCGAGCAAAACCGACCCCCAACCACGCGACGTCCT
GCCGCTAACATTGCCGGACGAAACAACCCCTCCCCCACGACGCGCTACGA
ACCGCCCGAACACACGCCCACCCACCCCGACTACGACACCCGCCGCGCGC
CTGCA
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