EY685163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.380e-18 Identity = 52/133 (39.10%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLE 516 M RGKIQ+K+IEN T+RQVT+SKRRNG+ KKA+EL+VLCDA V++I+FS +L+E+ S + K + Y+ + + ER MQ+ K + ++E +++ ++ LG+ L ++ R L+ ++E Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYER-MQETKRK---LLETNRNLRTQIKQRLGECLDELDIQELRRLEDEME 129
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 5.720e-18 Identity = 47/133 (35.34%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 127 RGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPL 525 R +I +++I+N +RQVTFSKRR G+ KKA ELS+LCDAEV +++FS G+L++F+S+ M++ ++RY +++ Q + A + E++ + R++ G++L EQ + L+ LE L Sbjct: 22 RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSMEQIIDRYNSHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLNVEQLQELEKSLESGL 154
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 9.757e-18 Identity = 49/142 (34.51%), Postives = 90/142 (63.38%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEE-RQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQTSPT 543 M R + ++K+IE+ +RQVTFSKRR G+ KKA ELSVLCDA+VA+I+FS G+L F+SS M + +++Y ++ + ++ ++ ++ K+ A++ E++ + R++ G++L + ++ + L+ LE L + T Sbjct: 1 MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASSSMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKY--AHLNEQLAEASLRLRQMRGEELEGLSIDELQQLEKNLEAGLHRVMLT 140
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.174e-17 Identity = 48/139 (34.53%), Postives = 90/139 (64.75%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF--SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 M RGKI++K+IEN T+RQVT+SKRR G++KKA EL+VLCDA+VA+I+FS G+ +EF S++++ +RY ++ I + + ++ ++++ + +++ R+ +G+DL ++ R L+ ++ L++ Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRY-----QQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKE 134
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 3.708e-17 Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEV----SHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQTSPTIG 549 M R KIQ+ +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIFS +LY+++S++M + L +Y Y E + N N+IEK V S L RT ++ +D + + +Q+ IG Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHESLTN-------------KNIIEKENKNGVMSPDSPEAETDYTLTPRTEAKYNKIDEEFQNMMQRNQMAIG 134
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 3.708e-17 Identity = 49/120 (40.83%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGM--ERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRS 474 M RGKI++K+IEN T+RQVTFSKRR G+LKKA E+ VLCDAEV V+IFS G+L ++ + + R E+ Q + + + + L EI + ++ ++++ R + G+DL S Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNS 120
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.324e-17 Identity = 49/139 (35.25%), Postives = 88/139 (63.31%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF--SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQ 531 M RGKI++K+IEN +R VTFSKRRNG++KKA E++VLCDA+VA+IIF+ G++ ++ S ++ L++Y + + ++ D + L +EI + ++ +++ R L G+D++S + ++H +E L + Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAK-----HENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDK 134
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.260e-17 Identity = 53/139 (38.13%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSE-MQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQQT 534 M R K+++K+IEN +SRQVTFSKRRNG+++KA +LSVLCDA VA+++ S G+LY FSS + + K L+ RY ++ D ++ + L N + +E+ KL+G ++++ + + L+ LE L T Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILD---RYGKQHADDLKALDHQSKAL-----NYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALSVT 131
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 8.260e-17 Identity = 49/136 (36.03%), Postives = 85/136 (62.50%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIQHIEVSHRKLLGQDLRSRTHEQHRHLDHQLEPPLQ 528 M RGKIQ+K+IEN T+RQVT+SKRRNG+ KKA+ELSVLCDA+V++I+ S +L+E+ S T + + +Y + +D + ++++ + + E +++ R+ +G+ L +EQ +L ++ L+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEY-ISPTTATKQLFDQYQKAVGVDL--WSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNLIEDMDNSLK 133
BLAST of EY685163 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.840e-16 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1 Query: 121 MVRGKIQMKKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYT 339 M RGKIQ+K+IEN RQVTF KRR G+LKKA ELSVLCDAE+ V+IFS +G+L+E ++ M+ +++Y + T Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCT 74 The following BLAST results are available for this feature:
BLAST of EY685163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >EY685163 ID=EY685163; Name=EY685163; organism=Citrus sinensis; type=EST; length=1005bpback to top |