EY685155

Overview
NameEY685155
Unique NameEY685155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_LACLS (Elongation factor Tu OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G
Sbjct:   50 IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDG 111          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_LACLM (Elongation factor Tu OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G
Sbjct:   50 IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDG 111          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_LACLA (Elongation factor Tu OS=Lactococcus lactis subsp. lactis GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 32/62 (51.61%), Postives = 44/62 (70.97%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +D    ERERGITI+ A  ++ET K +   IDAPGH D++KNMITG +Q D A+L++ +T G
Sbjct:   50 IDAAPEERERGITINTAHIEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDG 111          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_HELMI (Elongation factor Tu OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 1
Query:   91 AEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +++ K SFK    +D    ERERGITI+ A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +  G
Sbjct:   37 SKVGKASFKKYDEIDAAPEERERGITINTAHVEYETDNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADG 111          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_EUBR3 (Elongation factor Tu OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +DK   ERERGITI  A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +T G
Sbjct:   51 IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 112          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_CLAMS (Elongation factor Tu OS=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / JCM 9667) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G
Sbjct:   53 IDSAPEERQRGITINISHVEYETPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDG 114          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_CLAM3 (Elongation factor Tu OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) GN=tuf PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 31/62 (50.00%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  130 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            +D    ER+RGITI+I+  ++ET K +   +DAPGH D+IKNMITG +Q D A+L++ +T G
Sbjct:   53 IDSAPEERQRGITINISHVEYETPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDG 114          
BLAST of EY685155 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.831e-11
Identity = 39/105 (37.14%), Postives = 56/105 (53.33%), Query Frame = 1
Query:    1 PRVRSTTTGHSIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 315
            P V   T GH  +    +   + +   K   ++  RSF     +D    ERERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G
Sbjct:   11 PHVNVGTIGHIDHGKTTLTAAITKVLSKHNPKIAFRSFDS---IDNAPEERERGITIATAHVEYETANRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG 112          
The following BLAST results are available for this feature:
BLAST of EY685155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
EFTU_LACLS7.831e-1151.61Elongation factor Tu OS=Lactococcus lactis subsp. ... [more]
EFTU_LACLM7.831e-1151.61Elongation factor Tu OS=Lactococcus lactis subsp. ... [more]
EFTU_LACLA7.831e-1151.61Elongation factor Tu OS=Lactococcus lactis subsp. ... [more]
EFTU_HELMI7.831e-1144.00Elongation factor Tu OS=Heliobacterium modesticald... [more]
EFTU_EUBR37.831e-1150.00Elongation factor Tu OS=Eubacterium rectale (strai... [more]
EFTU_CLAMS7.831e-1150.00Elongation factor Tu OS=Clavibacter michiganensis ... [more]
EFTU_CLAM37.831e-1150.00Elongation factor Tu OS=Clavibacter michiganensis ... [more]
EFTU_ACIBL7.831e-1137.14Elongation factor Tu OS=Acidobacteria bacterium (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-D12-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685155 ID=EY685155; Name=EY685155; organism=Citrus sinensis; type=EST; length=930bp
CCACGCGTCCGGTCGACCACCACCGGACACTCTATCTACAAGCTTGGTGG
TATTGACAAGCGTGTGATCGAGAGGTTCGAGAAGGAAGCTGCTGAGATGA
ACAAGAGGTCATTCAAATACGCCTGGGTGCTCGACAAGCTCAAGGCTGAG
CGTGAACGTGGTATTACCATTGATATTGCCTTGTGGAAGTTCGAGACCAC
CAAGTACTACTGCACCGTCATTGATGCTCCCGGACATCGTGACTTTATCA
AGAACATGATTACCGGTACCTCACAGGCTGACTGTGCTGTCCTCATCATT
GACTCTACCACTGGAGGCTTTGAAGCTGGTATCTCCCAGGATGGTCAACA
CTCGTGACCGCTGCTTTGCTTGCTTTAGCCTTGGGCGAGAAGCGCAAGAG
TGCCTGGGGGGGGGGGGGGACACTACCCCACCCCCACGGGGGCGAGCCCA
CGTGCCACCGACCCGCGCGAAAAGACAGAGCCAAGACCGCCAAGGACCGC
CCAGCAGGCAAACAACCACCACCGGGAAGAGCAACAGCACGCAGGACGCG
CGATAACTGCCACGGGGCCGGCCCCGGCCCCCGCCCCCGCGCCGCGCACC
CCGCCCAAGGACCCGAGCCGCGCACACCGACAGACCCGAGGAAGGGACAG
GAGGCAGACCGAAGGCCCAAGACAGACCGAGGGGCGAGCAGAGCGATGAA
ACCGACACCGCAGGCAAGCCACGACGCACGCCGGGCCCACAGACGCGAAG
ACCGCAACAGGCCACCCAAGGAGCGGAGGGCACGCCCCGCCCGCACCCGA
CTCCCTACGGGCGCCGACAAGACGACAAGCCAGCGACGCCACGCCCCCCC
CCACCACCGGCACCCGCCACACCACCCGGCGCCGCCCCAGCCAGCGCCAG
CGCGCCACGCCGCCCACCCCGCCCGAACAG
back to top