EY710380

Overview
NameEY710380
Unique NameEY710380
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:321..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.923e-21
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 396
            Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   76 QFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPG-LQIVDFALFKN-DLATELIAQTTLLDAPQIKKLK 202          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.284e-21
Identity = 59/132 (44.70%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 396
            Q PG+N LGIS  R+D  P G  P H HP ASE+ LV++GT+  GFV SD   NT   K L KGD+ VFPQGL+HFQ N G T A A+ + +S  PG + I D     N  +  + + +   LD   +K L+
Sbjct:   76 QFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD---NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPG-LQILDFALFKN-DLPTELIAQTTFLDAAQIKKLK 202          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL813_ORYSJ (Germin-like protein 8-13 OS=Oryza sativa subsp. japonica GN=Os08g0459700 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 5.596e-21
Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQNKF 405
            Q P +N LGISA R+D  P G  P H HP  SE+  VL+G L  GF++S   +N +  K ++KG +FVFPQGL+HFQ+N G T A A++A +S  PG + I D    AN ++   ++ K   L    V+ L++KF
Sbjct:   85 QYPAVNGLGISASRVDILPGGVVPLHTHPAGSELLYVLDGALVAGFISSS--DNKVYYKEVSKGGMFVFPQGLLHFQYNTGDTTAVAFAAYSSSNPG-LQILDYALFAN-NLPTSYVVKGTFLAEAEVRRLKSKF 215          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GLP1_BRANA (Germin-like protein 1 OS=Brassica napus GN=GER1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 58/132 (43.94%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 396
            Q P LN LGIS  R+D AP G  P H HP ASE+  VL+G++  GF++S    N++  + L  G V VFPQGL+HFQ N GKT AAA    +S  PG + I D    AN +++ + +     L P  VK L+
Sbjct:   74 QFPALNGLGISTARLDLAPKGVIPMHTHPGASEVLFVLDGSITAGFISS---ANSVYVQTLKPGQVMVFPQGLLHFQINAGKTPAAALVTFSSASPG-LQILDFALFAN-TLSTELVSATTFLPPATVKTLK 200          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL31_ARATH (Germin-like protein subfamily 3 member 1 OS=Arabidopsis thaliana GN=GLP1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 9.545e-21
Identity = 60/132 (45.45%), Postives = 75/132 (56.82%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 396
            Q PGLN LG+S  R+D AP G  P H HP ASE+  VL G++  GFV+S    N +  + L  G V VFPQGL+HFQ N GK++A+A    NS  PG + I D    AN       +G  F LD   VK L+
Sbjct:   75 QFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSS---ANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPG-LQILDFALFANSLPTELVVGTTF-LDATTVKKLK 201          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL92_ORYSJ (Putative germin-like protein 9-2 OS=Oryza sativa subsp. japonica GN=Os09g0568600 PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 3.627e-20
Identity = 55/130 (42.31%), Postives = 76/130 (58.46%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD-PKIVK 387
            + P LN   +S   + + P    PPH HPR++E+ LV++G L VGF+ +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S  PG V +  TVFG    I+   L K+F+ D P I+K
Sbjct:   79 EFPALNGQSVSYATLVFPPSTVNPPHTHPRSAELLLVVDGALSVGFIDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAPGVVPVPVTVFGT--GIDDAVLAKSFKTDVPTILK 203          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL93_ORYSJ (Germin-like protein 9-3 OS=Oryza sativa subsp. japonica GN=Os09g0568700 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20
Identity = 54/132 (40.91%), Postives = 77/132 (58.33%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQ 396
            + P LN   +S   + Y P    PPH HPR++E+ L+++G L VGFV +    N L  + L  GD+FVFP+G++HFQFN G   A A SA  S   G V++  TVFG N  I+   L K+F+ D   ++ L+
Sbjct:   79 EFPALNGQSVSYAVLMYPPATLNPPHTHPRSAELLLLVDGALSVGFVDT---TNKLYTQDLAAGDMFVFPKGMVHFQFNSGNQPAMALSAFGSAAAGLVSVPVTVFGTN--IDDAVLAKSFKTDVPTIQKLK 205          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL814_ORYSJ (Germin-like protein 8-14 OS=Oryza sativa subsp. japonica GN=GER5 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20
Identity = 57/133 (42.86%), Postives = 79/133 (59.40%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLDPKIVKDLQN 399
            Q PG+N LGISA R+D A  G  P H HP ASE+  V +GT+  GF+TS   +NT+  + L  GD+ VFPQGL+H+Q+N G++ A A  A +   PG + I D    AN ++    + K   LD   VK L++
Sbjct:   79 QFPGVNGLGISAARLDIAVGGVVPLHTHPAASELLFVTQGTVAAGFITSS--SNTVYTRTLYAGDIMVFPQGLLHYQYNAGQSAAVALVAFSGPNPG-LQITDYALFAN-NLPSAIVEKVTFLDDAQVKKLKS 207          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL34_ARATH (Germin-like protein subfamily 3 member 4 OS=Arabidopsis thaliana GN=At5g61750 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.187e-20
Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1
Query:    1 QIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAAAYSALNSQFPGEVTIADTVFG 321
            + PGLNTLG+S  R D    G  P H HPR+SE+  V++G ++ GFV +   NN +   VL KGDVFVFP+GL+HF  + G   A A+S  NSQ PG V I + VFG
Sbjct:   81 EFPGLNTLGLSVSRTDLERDGSVPFHSHPRSSEMLFVVKGVVFAGFVDT---NNKIFQTVLQKGDVFVFPKGLLHFCLSGGFEPATAFSFYNSQNPGVVNIGE-VFG 183          
BLAST of EY710380 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.080e-20
Identity = 50/124 (40.32%), Postives = 79/124 (63.71%), Query Frame = 1
Query:    4 IPGLNTLGISAFRIDYAPYGQRPPHIHPRASEIFLVLEGTLYVGFVTSDQLNNTLIAKVLNKGDVFVFPQGLIHFQFNIGKTNAA-AYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFQLD 372
            +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  +  + L+ G+ FVFP+GLIHF +NI   ++A A S L+SQ PG   ++ + F + P    + L  A+ ++
Sbjct:   84 LPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDIN 204          
The following BLAST results are available for this feature:
BLAST of EY710380 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
AB19B_PRUPE1.923e-2144.70Auxin-binding protein ABP19b OS=Prunus persica GN=... [more]
AB19A_PRUPE4.284e-2144.70Auxin-binding protein ABP19a OS=Prunus persica GN=... [more]
GL813_ORYSJ5.596e-2142.96Germin-like protein 8-13 OS=Oryza sativa subsp. ja... [more]
GLP1_BRANA9.545e-2143.94Germin-like protein 1 OS=Brassica napus GN=GER1 PE... [more]
GL31_ARATH9.545e-2145.45Germin-like protein subfamily 3 member 1 OS=Arabid... [more]
GL92_ORYSJ3.627e-2042.31Putative germin-like protein 9-2 OS=Oryza sativa s... [more]
GL93_ORYSJ4.737e-2040.91Germin-like protein 9-3 OS=Oryza sativa subsp. jap... [more]
GL814_ORYSJ6.187e-2042.86Germin-like protein 8-14 OS=Oryza sativa subsp. ja... [more]
GL34_ARATH6.187e-2049.53Germin-like protein subfamily 3 member 4 OS=Arabid... [more]
GL11_ARATH8.080e-2040.32Germin-like protein subfamily 1 member 1 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-107-C07-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710380 ID=EY710380; Name=EY710380; organism=Citrus sinensis; type=EST; length=629bp
CAAATTCCAGGACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTA
TGCACCATATGGCCAAAGGCCACCTCACATTCACCCCCGTGCCAGCGAAA
TCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTTTTGTGACATCAGAC
CAACTGAATAACACACTCATCGCAAAAGTTCTAAATAAGGGAGATGTTTT
TGTGTTTCCACAAGGTTTGATTCACTTCCAATTCAACATTGGAAAAACAA
ATGCAGCTGCCTATTCTGCTCTAAACAGCCAATTCCCGGGTGAAGTTACC
ATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATCAATCCCGATTTTCT
TGGCAAGGCATTCCAGTTGGACCCAAAGATAGTGAAAGATCTTCAAAATA
AGTTCATTAATGGCAATTAGGAGAAGGAATTAATGAGCTTTAATATAAAT
GGCCTCTTCACTAGTGGCTGTATTACTTTATCTCCAGATTATCATATCTT
AATTAATGTAATAAAAGAGGTCTCTCATGAACCTCTCTCCAGGCTGACTG
TGGCCATGTAATAAACATAATTGTTATTGTTTTTATTTNAAANAAAAAAA
AAAAAAATAAAAGACAAATACAAAAAAAG
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