EY685154

Overview
NameEY685154
Unique NameEY685154
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY685154 vs. ExPASy Swiss-Prot
Match: PSBO_CHLRE (Oxygen-evolving enhancer protein 1, chloroplastic OS=Chlamydomonas reinhardtii GN=PSBO PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.196e-11
Identity = 36/94 (38.30%), Postives = 53/94 (56.38%), Query Frame = 3 
Query:  258 ATSALVVSGASAEGVPKRLTYDEIQSKTYMEVKGTGTANQCPTIDGGGDSF-AFKPGKYQAKKFCLKPPSLHCQG*ERPKNAPPDFQNTKLMTR 536
            A +A  ++ A   G    LT+DEIQ  TY++VKG+G AN CP ++ G  +    K G Y+ + FC++P S   +   + K    +F  TKLMTR
Sbjct:   34 AAAAAALATAMVAGSANALTFDEIQGLTYLQVKGSGIANTCPVLESGTTNLKELKAGSYKLENFCIEPTSFTVKEESQFKGGETEFVKTKLMTR 127
[Close]
BLAST of EY685154 vs. ExPASy Swiss-Prot
Match: PSBO_EUGGR (Oxygen-evolving enhancer protein 1, chloroplastic OS=Euglena gracilis GN=PSBO PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.456e-11
Identity = 39/101 (38.61%), Postives = 54/101 (53.47%), Query Frame = 3 
Query:  240 IAGFALATSALVVSGASAEGV-PKRLTYDEIQSKTYMEVKGTGTANQCPTI-DGGGDSFAFKPGKYQAKKFCLKPPSLHCQG*ERPKNAPPDFQNTKLMTR 536
            +AG   A  A ++  A A       LTYDE+QS +Y+EVK +G A  CP + DG     + K GKY+   +CL+P S   +     K    +F+ TKLMTR
Sbjct:   71 LAGAGRAMGAALIGAAVAGSANAASLTYDELQSLSYLEVKSSGIAGTCPVLADGVSSKLSLKAGKYEINNWCLEPSSFQVKLPPTEKQQVTEFERTKLMTR 171

HSP 2 Score: 20.7866 bits (42), Expect = 1.456e-11
Identity = 9/25 (36.00%), Postives = 13/25 (52.00%), Query Frame = 1 
Query:  538 LNYTLDEIDGTFEESPDGTLTEEQQ 612
            L YTLD I        DG+ T +++
Sbjct:  172 LTYTLDAISADLNVGGDGSWTIQEK 196
The following BLAST results are available for this feature:
BLAST of EY685154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PSBO_CHLRE1.196e-1138.30Oxygen-evolving enhancer protein 1, chloroplastic ... [more]
PSBO_EUGGR1.456e-1138.61Oxygen-evolving enhancer protein 1, chloroplastic ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-D11-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685154 ID=EY685154; Name=EY685154; organism=Citrus sinensis; type=EST; length=926bp
TACTAGCAAGTAACCCACGAGTGGTAGGGAGCAAGATGGCAGCCTCGTTA
CAAGCCGCAGCTACACTGATGCAACCCACCAAGGTGGGTGTGGTACCCGC
TCGCAGCAGCAGCCTGCAGCTGAGGTCTTCACAGAGCGTTTCGAAGGCTT
TTGGTGTCGACTCAGCTGGTGCTAGGATCTCTTGCACTTTGAATAATGAC
TTGAAGGATTTGGCTCAGAAATGTGTTGATGCTACCAAGATCGCTGGCTT
TGCCCTCGCCACTTCTGCTCTCGTCGTTTCGGGAGCAAGTGCTGAAGGTG
TTCCAAAGAGGCTAACCTATGATGAAATCCAGAGCAAGACATACATGGAA
GTAAAGGGAACCGGAACTGCTAACCAGTGCCCAACCATTGATGGCGGAGG
TGACTCTTTTGCCTTCAAACCTGGCAAATACCAGGCTAAGAAGTTCTGCC
TAAAACCACCTTCCCTTCACTGTCAAGGCTGAGAGCGTCCCAAGAATGCC
CCGCCAGATTTCCAAAACACCAAGCTCATGACCCGCCCTTAACTACACCC
TTGACGAAATTGACGGCACTTTTGAAGAGTCCCCCGATGGAACATTAACG
GAGGAACAACAAGCCCGAAGACGACCAGGCAGACAGACAGCCCACCCGGC
CCACCACCGAGCCCCCCTCCACCCCACGCTCCGCACCCCCGCCAAAAGGG
GCACGGACCTCCAGGCAGGCACCTCAGCCCCACGACGACAACACGCGACC
TCCCGGGACGCGCCCGCGTAAGCCCGCACGACCGTCCCCCGCCCAACCGC
CCCCTACGCCCCGCCCGCGCCAGTCGCCTCCCGCGACCAATGACGCCACA
GGCGCCGTCCGGCAACCACGAATCCCACACCCCACACCACAAACGAAACC
ACACACCCACAAAAAGAGCACAGCAG
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