EY685151

Overview
NameEY685151
Unique NameEY685151
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length974
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY685151_ssr475 microsatellite EY685151_ssr475:475..489. BLAST: Citrus ESTs to Prunus persica proteins V1
EY685151_ssr504 microsatellite EY685151_ssr504:504..518. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS4_ARATH (Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana GN=GRXS4 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.132e-15
Identity = 45/103 (43.69%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            ++Q++ISE  V+IFS++SCCM H +KTLF   GV+PT+ ELD  EI+    ++   +    SP      P VFIGG  VGG   +++LH+   LVP L  +GA
Sbjct:    3 KLQKMISEKSVVIFSKNSCCMSHTIKTLFIDFGVNPTIYELD--EINRGKEIEQALAQLGCSP----TVPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRVGA 99          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS5_ARATH (Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana GN=GRXS5 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.479e-15
Identity = 46/102 (45.10%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  142 IQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            +Q++ISE  V+IFS++SCCM H +KTLF   GV+PT+ ELD+  I         E A A    +P   P VFIGG  VGG   +++LH+   LVP L   GA
Sbjct:    4 LQKMISEKSVVIFSKNSCCMSHTIKTLFLDFGVNPTIYELDEINIGR-----EIEQALAQLGCSPT-VPVVFIGGQLVGGANQVMSLHLNRSLVPMLKRAGA 99          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC9_ARATH (Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 4.303e-15
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 1
Query:   70 HLDLTPPSSTTNLSIDGEESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            ++  T   S   LS+  + + E R++ ++ E+ VI+  R  CCMCHV++ L   +GV+P V+E+D+       ++   E+            PAV++GG   GGL+ ++A HI G LVP L E+GA
Sbjct:   12 NMTTTVGESLRPLSLKTQGNGE-RVRMVVEENAVIVIGRRGCCMCHVVRRLLLGLGVNPAVLEIDEERED--EVLSELENIGVQGGGGTVKLPAVYVGGRLFGGLDRVMATHISGELVPILKEVGA 134          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRC14_ORYSJ (Putative glutaredoxin-C14 OS=Oryza sativa subsp. japonica GN=GRXC14 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 5.621e-15
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            R+ +L SE  V+IF+ SSCCMCH +  LF  +GV+  V ELD       P     E A         P P VFIGG  VGG   +++LH+GG L+P L   GA
Sbjct:    3 RVMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQD-----PRGKEMERALLKLLGRGPPVPVVFIGGKLVGGTNKIMSLHLGGELIPMLKNAGA 100          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS7_ARATH (Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana GN=GRXS7 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 7.341e-15
Identity = 42/103 (40.78%), Postives = 64/103 (62.14%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            ++Q++ SE  ++IFS++SCCM H +KTLF  +GV+PT+ ELD  EI+    ++   +    SP      P VFIGG  VGG   +++LH+   L+P L  +GA
Sbjct:    3 KLQKMTSEKSLVIFSKNSCCMSHTIKTLFLDLGVNPTIYELD--EINRGKEIEQALAQLGCSP----TVPVVFIGGQLVGGANQVMSLHLNRSLIPMLKRVGA 99          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC7_ARATH (Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 9.587e-15
Identity = 45/103 (43.69%), Postives = 56/103 (54.37%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            RI+ L SE  V+IFS S+CCMCH +K LF  +GV P V ELD H                    +P   P VFIGG  VG ++ ++A HI G LVP L + GA
Sbjct:   31 RIESLASESAVVIFSVSTCCMCHAVKGLFRGMGVSPAVHELDLHPYGGDIQRALIRLLGCSGSSSPGSLPVVFIGGKLVGAMDRVMASHINGSLVPLLKDAGA 133          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC2_ORYSJ (Putative glutaredoxin-C2 OS=Oryza sativa subsp. japonica GN=GRXC2 PE=3 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 1.252e-14
Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = 1
Query:  139 RIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            R+ RL S+  V+IF  S+C MCHV+KTLF+ +GV   V     HE+   P     E A A       P PAVFIGG  VG  + +++LH+ G LVP L E GA
Sbjct:    4 RVARLSSQRAVVIFGASNCFMCHVVKTLFSELGVSWAV-----HEVDKDPNGKDVERALAGMVGRTPPVPAVFIGGKLVGPTDQVMSLHLAGKLVPLLREAGA 101          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXC8_ARATH (Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.635e-14
Identity = 50/144 (34.72%), Postives = 77/144 (53.47%), Query Frame = 1
Query:   22 YREEMQGLRRYPNDVVHLDLTPPSSTTNLSIDGEESSEARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELD--DHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            Y+ E +G   Y N+   ++        N+++   E+  A+I+ + +E+ V+IFS S+CCMCH +K LF  +GV P V ELD   + +     +       +    +P   P VFIGG  VG +E ++A HI G LVP L + GA
Sbjct:    3 YKTETRGSLSYNNNSKVMN--------NMNVFPSETL-AKIESMAAENAVVIFSVSTCCMCHAIKRLFRGMGVSPAVHELDLLPYGVEIHRALLRLLGCSSGGATSPGALPVVFIGGKMVGAMERVMASHINGSLVPLLKDAGA 137          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS2_ARATH (Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana GN=GRXS2 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.758e-14
Identity = 43/102 (42.16%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  142 IQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDHDESAHADSPRNPAPAPAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            I +++ E PV+I+S+SSCCM H +KTL    G +P V ELD  EIS    ++        SP      P VFIGG  VGG   +++LH+ G L+P L   GA
Sbjct:    4 ITKMVMERPVVIYSKSSCCMSHTIKTLLCDFGANPAVYELD--EISRGREIEQALLRLGCSP----AVPGVFIGGELVGGANEVMSLHLNGSLIPMLKRAGA 99          
BLAST of EY685151 vs. ExPASy Swiss-Prot
Match: GRXS3_ORYSJ (Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. japonica GN=GRXS3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.214e-14
Identity = 46/117 (39.32%), Postives = 63/117 (53.85%), Query Frame = 1
Query:  133 EARIQRLISEHPVIIFSRSSCCMCHVMKTLFATIGVHPTVIELDDHEISALPLVDH-----------DESAHADSPRNPAPA-PAVFIGGTCVGGLESLVALHIGGHLVPKLVEIGA 447
            E  ++R + E PV++  R  CCM HV + L    G +P V+E+ D +     LVD            D++A  D     A A PAVFIGG  VGGL+ L+A+H+ G LVP L + GA
Sbjct:   18 EREVRRAVEEKPVVVVGRRGCCMAHVARRLLLGQGANPAVLEVGD-DADPAALVDAALQARRRKDGGDKAAAGDGGGGAAVAFPAVFIGGRLVGGLDRLMAMHMAGELVPVLKQAGA 133          
The following BLAST results are available for this feature:
BLAST of EY685151 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GRXS4_ARATH1.132e-1543.69Monothiol glutaredoxin-S4 OS=Arabidopsis thaliana ... [more]
GRXS5_ARATH1.479e-1545.10Monothiol glutaredoxin-S5 OS=Arabidopsis thaliana ... [more]
GRXC9_ARATH4.303e-1534.13Glutaredoxin-C9 OS=Arabidopsis thaliana GN=GRXC9 P... [more]
GRC14_ORYSJ5.621e-1542.72Putative glutaredoxin-C14 OS=Oryza sativa subsp. j... [more]
GRXS7_ARATH7.341e-1540.78Monothiol glutaredoxin-S7 OS=Arabidopsis thaliana ... [more]
GRXC7_ARATH9.587e-1543.69Glutaredoxin-C7 OS=Arabidopsis thaliana GN=GRXC7 P... [more]
GRXC2_ORYSJ1.252e-1444.66Putative glutaredoxin-C2 OS=Oryza sativa subsp. ja... [more]
GRXC8_ARATH1.635e-1434.72Glutaredoxin-C8 OS=Arabidopsis thaliana GN=GRXC8 P... [more]
GRXS2_ARATH4.758e-1442.16Monothiol glutaredoxin-S2 OS=Arabidopsis thaliana ... [more]
GRXS3_ORYSJ6.214e-1439.32Monothiol glutaredoxin-S3 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-010-D07-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685151 ID=EY685151; Name=EY685151; organism=Citrus sinensis; type=EST; length=974bp
CAAGAATCTGTTTCTACTTTCTATAGAGAGGAGATGCAAGGCCTAAGGCG
TTACCCAAACGACGTCGTCCACCTCGACCTCACCCCTCCCTCGTCAACCA
CTAACTTGTCCATCGACGGTGAAGAATCCTCGGAGGCAAGAATCCAACGC
CTGATATCCGAGCACCCGGTGATAATATTCAGCCGGTCGTCTTGCTGCAT
GTGCCACGTCATGAAAACGCTCTTCGCCACCATCGGGGTGCACCCTACCG
TCATCGAGCTCGATGATCACGAGATCTCAGCCCTCCCTCTTGTTGACCAT
GATGAGAGCGCTCACGCCGACTCCCCTCGTAATCCGGCGCCGGCGCCCGC
AGTCTTCATCGGCGGCACGTGCGTCGGTGGCCTCGAGTCCCTCGTCGCCC
TCCACATCGGCGGCCACCTCGTGCCCAAGCTTGTAGAAATTGGCGCTCTC
TGGGTATGATAATTATTAGTTACTTTATTATTATTATTACTATAATATAT
CAAAATAATAATAATAATAAATCTATTATTACTACTATTATTATTAGTAG
AATTAGAAAGGCACCCAATTCTGATTCTTATATATGTTATGTTAATTACT
TAGTTTGGGTTCTTAATTACTCCAGTGTTCTTTTAGGGTCTCTCTTTTCT
TATTGGAAGTGAACTTAAACTTTAGGAGATCAAAGGGAAAACAAAAAAAA
AAAAAAACTAAACCTTCTTTCCCTTTGGATGAATTGAGGAGGGGGCGGTT
AAAGAGAGTATGAGTTTGGAATACCTCGGAGAAAGGGCACAGCATACACG
CTATACATGCAACGCCCTAAATCCCAGCCCGACGGCCAGCCTGTTATCCT
AACCCTCCAGGATGGCGGGCGCCCCGTATCTCCCCAAAAACCAACAACAA
GCTCCAACAAACATATACAACACCAAGAATAAACACCAAAAAAAAAACAT
GCATGAACGTAACGAACACATAAC
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