EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ANASP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Anabaena sp. (strain PCC 7120) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 55/152 (36.18%), Postives = 81/152 (53.29%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINL 448
            T++  P M A  + + A  AI    +  + +N  N DMVGHTG IE T+ A +  D  +  +++ + K GG  ++TADHGNAE M         L + GN    T+HT  PVP I + G     PG   NV+ R+D   G LA++A T +++
Sbjct:  362 TYDKAPAMSATAVTDTAIAAIQKGIYSLIVINYANPDMVGHTGQIEPTIKAIETVDRCLGRLLEGVSKAGGTTIITADHGNAEYM---------LDEAGN--SWTAHTTNPVPLILVEGEKVKIPGYGTNVELRSD---GKLADIAPTILDI 499          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ACIBL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Acidobacteria bacterium (strain Ellin345) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 50/155 (32.26%), Postives = 78/155 (50.32%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADL-PNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A  IA+  + A+    F  + VN  N+DMVGH+G I  T+ A +  D  +  + + + K GG  L+TADHGNAE M+     G            T+HT  PVP       + ++ K R  L P+G L +++ T + + G   P +
Sbjct:  384 TYDLKPEMSANGIADVIEHAVEKGAFDVIVVNFANADMVGHSGKIPPTITAVETVDSCLGRVYNVVRKKGGAMLITADHGNAEQMIDPETGGPQ----------TAHTTNPVPFIF----VAEDAKKRFSLRPDGALQDISPTMMGILGIPQPKE 524          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SYNP6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAP 466
            T++  PKM A  + + A  AI    +  V +N  N DMVGHTG + ATV A +  D  +  ++ AI + GG  L+TADHGNAE M   N  GEP          T+HT   VP I + G     PG    +  R D   G L+++A T + L G   P
Sbjct:  362 TYDRAPKMSAQAVTDAAIAAIDKGIYSLVVINYANPDMVGHTGKMGATVEAIETVDRCLGRLVSAINRAGGTALITADHGNAEYMWDEN--GEP---------WTAHTTNLVPFIVVEGERRKLPGFGTEIPLRED---GRLSDIAPTILQLLGLPQP 505          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SYNE7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus elongatus (strain PCC 7942) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 59/158 (37.34%), Postives = 79/158 (50.00%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAP 466
            T++  PKM A  + + A  AI    +  V +N  N DMVGHTG + ATV A +  D  +  ++ AI + GG  L+TADHGNAE M   N  GEP          T+HT   VP I + G     PG    +  R D   G L+++A T + L G   P
Sbjct:  362 TYDRAPKMSAQAVTDAAIAAIDKGIYSLVVINYANPDMVGHTGKMGATVEAIETVDRCLGRLVSAINRAGGTALITADHGNAEYMWDEN--GEP---------WTAHTTNLVPFIVVEGERRKLPGFGTEIPLRED---GRLSDIAPTILQLLGLPQP 505          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_BACP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus pumilus (strain SAFR-032) GN=gpmI PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +     I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++DAI   GG  ++TADHGNA+ ++   + G+P          T+HT  PVP+ +   G        A L  GG LA+++ T ++L G E P +
Sbjct:  367 TYDLKPEMSAYEVKDALVADINADKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDECLGAVVDAILAKGGHAIITADHGNADVLI--TEEGKP---------HTAHTTNPVPVIVTKKG--------ATLREGGILADLSPTLLDLLGVEKPKE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ONYPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Onion yellows phytoplasma GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.388e-16
Identity = 54/154 (35.06%), Postives = 79/154 (51.30%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M ALEI   AK AILS ++  + +N  N DMVGHTG ++AT+ A +  D  +K +++AI  V G   + ADHGNAE M   +  G P          T+HT   VP  +    +         L  G L +VA T ++L   + P +
Sbjct:  367 TYDLKPEMSALEITTHAKTAILSGKYDTLILNFANPDMVGHTGFLDATIKAIQTVDSCLKEVLNAIFAVKGKACIVADHGNAEQMT--DNQGNP---------HTAHTTNLVPFIVTDKNVV--------LKPGSLCDVAPTMLDLLEIKKPQE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SYNPX (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechococcus sp. (strain WH8102) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAPS 469
            T++  P M A ++ +    AI    +  + +N  N DMVGHTG ++A   A    D  +  ++DA+ + GG  L+TADHGNAE           L++  + Q  T+HT  PVP I + G     PG  +++  R D   GGLA++A T + +   E P+
Sbjct:  372 TYDLSPAMSADQLTDSCIDAIDQGTYSLIVINYANPDMVGHTGVMDAATEAIATVDRCIGRLLDAVGRRGGTMLITADHGNAE-----------LMQGPDGQAWTAHTTNPVPCILVEGEQRKLPGHGNDISLRED---GGLADIAPTLLQILNLEQPA 516          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CYAP8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cyanothece sp. (strain PCC 8801) GN=gpmI PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.037e-16
Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAI---GGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P M A  + + A  AI    +  V +N  N DMVGHTG++EA + A +  D  +  ++ +I K+GG  L+TADHGNAE MV  N  G P          T+H+  PVP+ I    G  +P +        NG LA++A T + +     P +
Sbjct:  362 TYDQAPAMSAETVTDTACNAIEKGIYSLVVINYANPDMVGHTGNLEAAIQAIETVDNCLGRLLTSISKMGGTVLITADHGNAELMVDEN--GNP---------WTAHSTNPVPLIIVEGEGRKIPGHGGAVDLADNGRLADIAPTILEILQLPKPEE 507          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PROMP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+      AI + ++  V +N  N DMVGHTG++ A + A +  D  +  I++A  ++GG  L+TADHGNAE M  +   GEP          T+HT+  VP I I G     P + + +  R    N GLA++A T + L     P +
Sbjct:  373 TYDMAPEMSAEELTISCSNAIKTGQYSFVVINFANPDMVGHTGNMAAAIKAIETVDRCIGKIVNATGEMGGSILITADHGNAELM--KGPDGEP---------WTAHTINKVPLIFIEGEKRKIPNMGNEIYLR---ENAGLADIAPTLLQLLNLPIPKE 518          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_EHRCJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ehrlichia canis (strain Jake) GN=gpmI PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 51/156 (32.69%), Postives = 80/156 (51.28%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDM--VKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T+N  P+M A ++ +   + I  +++  + VN  N+DMVGHTG+I+AT  A    D+ +  I++ I+    + ++T+DHGNAE+M  VK N               T+HTL PVP  I       N   +  L NG L +VA T + +     P +
Sbjct:  354 TYNLTPEMSAEKVTDTIIEKIKLQKYSLIIVNYANADMVGHTGNIDATKQAITTIDQCLSKILNCIQNTNYVLVITSDHGNAEEMFDVKNN------------MPYTAHTLNPVPFII------CNYNKKIRLKNGRLCDVAPTILEILNLAKPKE 491          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_ANASP3.159e-1636.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ACIBL3.159e-1632.262,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNP64.125e-1637.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNE74.125e-1637.342,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACP24.125e-1633.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ONYPE5.388e-1635.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNPX7.037e-1633.332,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CYAP87.037e-1634.392,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMP9.190e-1634.382,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_EHRCJ9.190e-1632.692,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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