EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 52/155 (33.55%), Postives = 77/155 (49.68%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A ++++   +AI    +  + VN  N DMVGHTGD++A + A +  D  +   ++A+   GG  +VTADHGN E MV     G            T+HT  PVP I + GP         A L  G LA++A T + L     P +
Sbjct:  361 TYDLQPEMSAPDVSDHLVEAI-GAGYDLIVVNYANPDMVGHTGDLKAAMAAVEEVDRGLGRAVEAVTTAGGAMIVTADHGNCETMVDPETGGPH----------TAHTTNPVPVILVNGPA-------GARLHAGRLADLAPTLLQLMQLPQPEE 497          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_OCEIH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Oceanobacillus iheyensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 46/154 (29.87%), Postives = 86/154 (55.84%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M   E+ +   K +     + + +N  N DMVGH+G ++ T+ A +A DE +  +ID I ++GG  ++TADHGN+++++         L+D   + +T+HT  PVP+ +      D+++ R     G LA+++ T ++L   E P +
Sbjct:  368 TYDLKPEMSVYEVTDALLKELDKGEQNAIILNFANPDMVGHSGKLQPTIDAIEAVDECLGKVIDKITELGGHAIITADHGNSDEVM--------TLED---KPMTAHTTNPVPVIV----TKDDIELR---DGGILADLSPTLLDLLNVEKPKE 503          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_LISMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+         L  GG LA+VA T ++L G + P++
Sbjct:  366 TYDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV--------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_LISMF (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+         L  GG LA+VA T ++L G + P++
Sbjct:  366 TYDLQPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV--------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_LISIN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Listeria innocua GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 51/155 (32.90%), Postives = 83/155 (53.55%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + I + +   + +N  N DMVGH+G +E T+ A +A DE +  ++D I + GG  ++ ADHGN+E M      G+P          T+HT  PVP+ +   G+         L  GG LA+VA T ++L G + P++
Sbjct:  366 TYDLKPEMSAYEVTDALVEDIKNDKHDAIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM--STPEGKP---------HTAHTTVPVPVIVTKKGV--------TLREGGRLADVAPTMLDLLGVKKPAE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_FLAJ1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 52/153 (33.99%), Postives = 75/153 (49.02%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPS 469
            T++  P+M A E+A+     +       V +N  N DMVGHTG +EA + AC+A D   K +IDA        +V ADHGN E M+  N  G P          T+HT  PVPI +    L        ++ +G L ++A T + L G + P+
Sbjct:  363 TYDLQPEMSAYELADALVPELNKGEVDFVCLNFANGDMVGHTGIMEAAIKACEAVDACAKKVIDAALANDYTTIVIADHGNCETMI--NPDGSP---------NTAHTTNPVPIILVDKQL-------KNIQDGVLGDIAPTILELMGVQQPN 497          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_BACME (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacillus megaterium GN=gpmI PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.016e-14
Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINL 448
            T++  P+M A E+ +     I   +   + +N  N DMVGH+G +E TV A +  DE +  I+DAI   GG  ++TADHGNA++++     G P         +T+HT  PVP+ +   GL    + R D   G L ++A T + L
Sbjct:  367 TYDLKPEMSAYEVTDALLAEIEGDKQDAILLNFANPDMVGHSGMLEPTVKAIETVDECLGKIVDAILAKGGTAIITADHGNADEVI--TLEGNP---------MTAHTTNPVPVIVTKQGL----ELRED---GILGDLAPTMLTL 494          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_WOLTR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVG-GIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ E+    I S+ F  +  N  N DMVGHTG++EA   A  A D+ +  +++ ++++   + +VTADHGN E M            + N    T+HTL  VP  I  P   +N+K    L +G L+++A T + L G + P +
Sbjct:  354 TYDLQPEMSAFELTEKLVGKIRSQEFTLIVANYANPDMVGHTGNMEAAKKAVLAVDDCLAKVLNTVKEINDAVLIVTADHGNVECM----------FDEKNNTPHTAHTLNKVPFII-YPNSCNNLK----LKDGRLSDIAPTILQLLGIKKPDE 493          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PROMA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 54/160 (33.75%), Postives = 81/160 (50.62%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPI--------AIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAP 466
            T++  P+M A ++ +  ++AI S  +  + +N  N DMVGHTG   AT  A    D+ +  I+D+  K+ G  L+TADHGNAE M  +   GEP          T+HT  PVP+         I G G  + ++ R     GGLA++A T + +     P
Sbjct:  372 TYDLSPEMSAEKLTKSCQEAIESGIYSLIVINYANPDMVGHTGIHAATKKAISTVDKCIGKILDSTGKMSGTLLITADHGNAELM--KGPDGEP---------WTAHTTNPVPVILIEGEKRKISGQG--NQIRLR---EGGGLADIAPTLLEVLSLPKP 515          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_DESAP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulforudis audaxviator (strain MP104C) GN=gpmI PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.327e-14
Identity = 52/154 (33.77%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +     I   ++  + +N  N DMVGHTGD+ A + A +  DE +  +++A+   GG  LV+ DHGNAE M   +  G P         LT+HT  PVP+ I G  +         L  G L +VA T ++L G   P +
Sbjct:  366 TYDLKPEMSAREVTDAFLANI--EKYDIIIMNYANPDMVGHTGDLSAAIKAVETVDECLGRVVEAVLARGGTVLVSGDHGNAEHMC--DAEGCP---------LTAHTCNPVPLLIIGEAVAGR-----SLRPGSLQDVAPTILDLLGLPKPPE 501          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_RHOS11.016e-1433.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_OCEIH1.016e-1429.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMO1.016e-1432.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISMF1.016e-1432.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LISIN1.016e-1432.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FLAJ11.016e-1433.992,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACME1.016e-1434.252,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_WOLTR1.327e-1432.902,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMA1.327e-1433.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESAP1.327e-1433.772,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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