EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CELJU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Cellvibrio japonicus (strain Ueda107) GN=gpmI PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14
Identity = 52/155 (33.55%), Postives = 81/155 (52.26%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGG-LANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++  +AI S ++  +  N  N DMVGH+G  +A V A +A D A+  ++ A++KV G  L+TADHGN E+M    ++G+P          T H+  PVP              +  L +GG LA+VA T + L     P +
Sbjct:  368 TYDLQPEMSAPEVTDKLVEAIESGKYDAIICNYANCDMVGHSGLFDAAVKAVEAVDVALGRVLAAVKKVDGEALITADHGNVEEMFD-EETGQP---------HTQHSTLPVPFIFVS-------SRKGKLASGGSLADVAPTILALMDLPQPKE 505          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_SYNY3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Synechocystis sp. (strain PCC 6803) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 54/160 (33.75%), Postives = 82/160 (51.25%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A  + +   +A+    +  V VN  N DMVGHTG ++  + A +  D  +  ++ +  KVGG  L+TADHGNAE M   ++SG P          T+HT  PVP I + G     PG    VK R     G LA++A T +++     P++
Sbjct:  362 TYDKAPQMSAKAVTDAVCRAMEKGIYSLVVVNYANPDMVGHTGKLKEAIQAIETVDLNLGRLLASAAKVGGTVLITADHGNAEYM--SDESGNP---------WTAHTTNPVPFILVEGEGRKIPGHGGEVKLR---EGGKLADIAPTILDILQLPVPAE 507          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PROMM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Prochlorococcus marinus (strain MIT 9313) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 50/152 (32.89%), Postives = 76/152 (50.00%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGG------PGLPDNVKFRADLPNGGLANVAATFINL 448
            T++  P M A  + E    AI S  +  V +N  N DMVGHTG + A   A    D  +  ++D+  ++GG  L+TADHGNAE           L++  + Q  T+HT  PVP+ +         G  ++++ R     GGLA++A T + L
Sbjct:  372 TYDLAPAMAADTLTESCVNAIESGVYSLVVINYANPDMVGHTGVMGAAQEAISTVDRCIGRLLDSTGRMGGTLLITADHGNAE-----------LMQGSDGQAWTAHTTNPVPVILVEGEKRKLAGYGNDIQLR---EGGGLADIAPTLLQL 509          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni GN=gpmI PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+ +  KK I  +    + VN  N DMVGHTGD  AT+ A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNATIKAVEAVDTCLGEILECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQARGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.586e-14
Identity = 50/159 (31.45%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+    K +A   N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQASGVS---KIKA---NMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_NATPD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 55/152 (36.18%), Postives = 73/152 (48.03%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAP 466
            T++  P M A E+ + A   I +     + +N  N DMVGHTGD EA   A +A DE +  +  AI + GG   VTADHGNA+DM      G P          T+HT  PVP     P   D      D   G LA++A T ++  G + P
Sbjct:  358 TYDEQPAMSAPELTDAAIDHIGADAPDVLVLNYANPDMVGHTGDFEAAKAAIEAVDEQLGRLESAIREAGGHLFVTADHGNADDM------GTPEAPH------TAHTTNPVPFVYCTPDGTDGGYTVRD--GGTLADIAPTLLSTIGVDIP 495          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCPE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma penetrans GN=gpmI PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 8.602e-14
Identity = 51/156 (32.69%), Postives = 78/156 (50.00%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYE 478
            T++ +P M A+EI ++  + +   +F  + +N  N+DMVGHTG     V+A +A D  +  I   I+++ G   +TADHGNAE M+           D +   +T HT  PV           +VKF      G L NVA T ++  G E P+D +
Sbjct:  360 TYDEVPAMSAVEITDKLIENL--DKFDVIVLNFANADMVGHTGKYNEAVLAIEALDSQLARIDQKIKELNGTMFITADHGNAEVML-----------DDDNNPVTKHTTNPVIFISNN----KDVKFNKP---GSLGNVAPTILDFMGLEIPADMD 495          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAES (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  +GG  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   + PS+
Sbjct:  361 TYDLKPEMSAYEVKDALLEELDKGDLDLILLNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKIIDMGGHAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVKQPSE 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAEQ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 46/154 (29.87%), Postives = 80/154 (51.95%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  +GG  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   + PS+
Sbjct:  361 TYDLKPEMSAYEVKDALLEELDKGDLDLILLNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKIIDMGGHAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVKQPSE 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni (strain RM1221) GN=gpmI PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.123e-13
Identity = 50/159 (31.45%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  II+  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIIECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_CELJU5.043e-1433.552,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SYNY36.586e-1433.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PROMM6.586e-1432.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJE6.586e-1431.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJD6.586e-1431.452,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_NATPD8.602e-1436.182,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCPE8.602e-1432.692,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAES1.123e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAEQ1.123e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJR1.123e-1331.452,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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