EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MW2) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAS (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MSSA476) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain MRSA252) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain N315) GN=gpmI PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gpmI PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus aureus (strain COL) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L   E P D
Sbjct:  361 TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVEQPED 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 49/159 (30.82%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CAMJ8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.467e-13
Identity = 49/159 (30.82%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+ +  KK I  +    + VN  N DMVGHTGD  A + A +A D  +  I++  +K    +++T+DHGN E M           +D    +LT+HT   V + +   G+   +K      N GL+N+AA+ + +   E P +   +L
Sbjct:  351 TYDEKPQMSAFEVCDAVKKGI-EKGEDFIVVNFANGDMVGHTGDFNAAIKAVEAVDTCLGEIVECAKKHDYAFIITSDHGNCEAM-----------QDEKGNLLTNHTTFDVFVFVQAKGV-SKIK-----DNMGLSNIAASVLKILDLEIPKEMNEAL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_PORPU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Porphyra purpurea GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 49/160 (30.63%), Postives = 81/160 (50.62%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P M A  + +++  AI    +  + +N  N+DM+GHTG ++ T+ + +  D  + ++ DA+ +  G  ++TADHGNAE M+    +             TSHT   VP I I G      G    V+FR    NG LA+VA T +++   + P +
Sbjct:  365 TYDLSPDMSAELVTQKSISAINKGIYSCIVINYANADMLGHTGKLKETIRSIETVDNCIALLFDAVSQSNGTLIITADHGNAECMLTNEGTS-----------CTSHTTNLVPFILIEGEQATISGHGGQVEFR---KNGSLADVAPTILDILNLKKPPE 510          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MOOTA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Moorella thermoacetica (strain ATCC 39073) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 53/156 (33.97%), Postives = 80/156 (51.28%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSR--RFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P M A E+ +    A+L R  ++  + +N  N DMVGHTGD+ A + A +  DE +  I+ A+ +     L+TADHGNAE+M  R   GEP          T+HT   VP       L D+    A L  G L +VA T +++   + P++
Sbjct:  368 TYDQKPSMSAREVTD----AVLERLDKYDFIVLNFANPDMVGHTGDLAAAIAAVETVDECIGRIVQAMAERRAPLLLTADHGNAEEM--REPDGEP---------HTAHTSNLVPFI-----LVDDRYRGASLREGALEDVAPTVLDILHIQQPAE 503          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_STAAW1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAS1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAR1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAN1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAM1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAAC1.467e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJJ1.467e-1330.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CAMJ81.467e-1330.822,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PORPU1.916e-1330.632,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MOOTA1.916e-1333.972,3-bisphosphoglycerate-independent phosphoglycera... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
back to top