EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_FRAP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=gpmI PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++   AI + ++  +  N  NSDMVGHTG+ EA + A +  D+ +  + DAI +  G   +TADHGNA DM+   K+ +P          T+HT   VP    G     + K +  L +G L+++A T +N+     P +
Sbjct:  363 TYDLQPEMSAPEVTDKLVDAINNGKYDCIVCNYANSDMVGHTGNYEAAMQAIEYLDKCLARLKDAILEHDGNMFITADHGNA-DMMVNPKTQKP---------HTAHTTNLVPFVYVG-----HKKAQVALEHGKLSDIAPTILNVMNIAQPQE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STRCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Streptomyces coelicolor GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 49/128 (38.28%), Postives = 65/128 (50.78%), Query Frame = 2
Query:   95 VRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLP------NGGLANVAATFINLHGYE 460
            V  NL N D+VGHTG++ ATV AC+A D AV  I+ A    G   +   DHGNAE M K+         DG+++    HT  PVP+ I        V  R D P         LA+VA T ++L G++
Sbjct:  388 VIANLANIDVVGHTGNLAATVTACEATDAAVDQILQAARNSGRWVVAVGDHGNAERMTKQ-------APDGSVRPYGGHTTNPVPLVI--------VPNRTDTPAPTLPGTATLADVAPTILHLLGHK 500          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_GEOSL (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Geobacter sulfurreducens GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.503e-13
Identity = 54/154 (35.06%), Postives = 80/154 (51.95%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A  + +   K I       V VN  N+DMVGHTG ++A V A +  DE V  +   + + GG  ++TADHGNAE MV  +++G P          T+HT + VP+      L D+ +  A L  G LA++A T + L G   P +
Sbjct:  365 TYDQKPEMSAPLVTDALLKRIDEGVDDVVVVNFANADMVGHTGILDAAVRAIETVDECVGRVAATVLEKGGALIITADHGNAEMMV--DETGGP---------HTAHTNERVPLI-----LVDDSRKGARLRPGTLADIAPTMLGLLGIPQPPE 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_TRIEI (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Trichodesmium erythraeum (strain IMS101) GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   14 FNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVP-IAIGG-----PGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            ++  P+M A ++ E A  A+  + +  + +N  N DMVGHTG ++A V A +  D  +  ++  I KVGG  ++ ADHGNAE M           +DGN    T+HT   VP I I G     PG    V  R    NG LA++A T + +     P++
Sbjct:  363 YDEAPEMSAEDLTEVAIAAVKKQIYSLIVINYANPDMVGHTGAMDAAVNAVQTVDHCLGKLLQGISKVGGTAIIIADHGNAEYMWD---------EDGN--PWTAHTTNLVPFILIEGEVSKIPGHGTKVPLR---ENGCLADIAPTILEILNLPQPAE 507          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_STAHJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 46/154 (29.87%), Postives = 78/154 (50.65%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +   + +       + +N  N DMVGH+G +E T+ A +A DE +  ++D I  + G  ++TADHGN++ ++  +            Q +T+HT  PVP+ +   G    V  R     G L ++A T ++L     PSD
Sbjct:  361 TYDLKPEMSAYEVKDALLEELDKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLGEVVDKILDMNGYAIITADHGNSDQVLTDDD-----------QPMTTHTTNPVPVIVTKEG----VTLR---ETGRLGDLAPTLLDLLNVGQPSD 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CLOTE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium tetani GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.269e-13
Identity = 47/154 (30.52%), Postives = 76/154 (49.35%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ +     I S ++  + +N  N DMVGHTG  +A   A +  D+ V  I D I +  G   +TADHGN+E M+  + +G+P         +T+HT   VP       +  + K +     G LA++A T +   G + P +
Sbjct:  364 TYDLKPEMSAFEVKDEVINRIESNKYDMIILNFANPDMVGHTGVFDAAKTAIEVVDKCVGEISDKILEKEGTVFITADHGNSEQMIDYS-TGKP---------MTAHTTNEVPFVY----VSKDAKDKRLKSEGILADIAPTMLTEMGVKIPEE 503          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCGA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma gallisepticum GN=gpmI PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13
Identity = 55/159 (34.59%), Postives = 76/159 (47.80%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPS--DYEP 481
            T++  P+M A  I ++  K     ++    +N  N DMVGHTG+ EAT+   +A D  +  ++   +K       TADHGNAE+M+           D N Q +T HT   VP +I  P    NVKF      G LANVA T +     + P   D EP
Sbjct:  362 TYDLAPEMSAAAIVDQLLKVYT--KYDLTVLNFANPDMVGHTGNYEATLKGLEALDHEIGRLLADAKKNNITVFFTADHGNAEEMI-----------DENNQKVTKHTTNVVPFSITDP----NVKFTK--KEGILANVAPTILKYLEIQIPEEMDQEP 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HELPH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori (strain HPAG1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.576e-13
Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+     +  +      + VN  N DMVGHTG+ EA+V A +A D  +  I+   +K+    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  351 TYDLKPEMSAKEVTLAVLEQ-MKLGTDLIIVNFANGDMVGHTGNFEASVKAVEAVDACLGEILSLAKKLDYAMLLTSDHGNCEHM-----------KDENQNPLTNHTAGSVYCFVLGDGV-------RSIKNGALNNIASSVLKLMGLKAPATMDEPL 490          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_WOLSU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Wolinella succinogenes GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+AE A  + + + +  + VN  N DMVGHTG+ EA + A ++ D  +  +++  +K G   ++T+DHGN E+M           +D    +LT+HT+  V   I   G+        ++  GGL  VA T + + G   P + +  L
Sbjct:  352 TYDLKPEMSAPEVAE-ATLSGMRQGYDFIVVNFANGDMVGHTGNTEAAISAVESVDRELGRLLEEAKKSGYAVILTSDHGNCEEM-----------RDERGSMLTNHTVGEVWCFILAQGV-------TEIREGGLNQVAPTVLKIMGLPTPKEMDSPL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HELPY (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 51/159 (32.08%), Postives = 78/159 (49.06%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+     +  +      + VN  N DMVGHTG+ EA+V A +A D  +  I+   +K+    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  351 TYDLKPEMSAKEVTLAVLEQ-MKLGTDLIIVNFANGDMVGHTGNFEASVKAVEAVDACLGEILSLAKKLDYAMLLTSDHGNCERM-----------KDENQNPLTNHTAGSVYCFVLGDGV-------KSIKNGALNNIASSVLKLMGLKAPATMDEPL 490          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_FRAP21.916e-1332.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STRCO2.503e-1338.282,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_GEOSL2.503e-1335.062,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_TRIEI3.269e-1333.962,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_STAHJ3.269e-1329.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOTE3.269e-1330.522,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCGA4.269e-1334.592,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELPH5.576e-1332.082,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_WOLSU7.282e-1330.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELPY7.282e-1332.082,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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