EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_BACFR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++   AI   ++  + VN  N DMVGHTG  EA   A  A D  VK  I+A +  G   ++ ADHGNA+  +  N+ G P          T+H+L PVP       + +N +  A + +G LA+VA T +++     P++
Sbjct:  360 TYDLKPEMSAYEVKDKLVAAINENKYDFIVVNYANGDMVGHTGIYEAIEKAVVAVDACVKDTIEAAKAQGYEAIIIADHGNADHAL--NEDGTP---------NTAHSLNPVPCVY----VTENKE--AKVADGRLADVAPTILHILDMVQPAE 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_BACFN (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gpmI PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.282e-13
Identity = 51/154 (33.12%), Postives = 80/154 (51.95%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+ ++   AI   ++  + VN  N DMVGHTG  EA   A  A D  VK  I+A +  G   ++ ADHGNA+  +  N+ G P          T+H+L PVP       + +N +  A + +G LA+VA T +++     P++
Sbjct:  360 TYDLKPEMSAYEVKDKLVAAINENKYDFIVVNYANGDMVGHTGIYEAIEKAVVAVDACVKDTIEAAKAQGYEAIIIADHGNADHAL--NEDGTP---------NTAHSLNPVPCVY----VTENKE--AKVADGRLADVAPTILHILDMVQPAE 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HELAH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter acinonychis (strain Sheeba) GN=gpmI PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13
Identity = 52/162 (32.10%), Postives = 81/162 (50.00%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRR---FHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A E+      A+L +       + VN  N DMVGHTG+ EA+V A +A D ++  I+   +++    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  352 TYDLKPEMSAKEVT----LAVLEQMRLGTDLIIVNFANGDMVGHTGNFEASVKAVEAVDTSLGEILSLAKELNYAMLLTSDHGNCEHM-----------KDENQNPLTNHTAGSVYCFVLGNGI-------KSIKNGALNNIASSVLKLMGIKAPATMDEPL 491          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HALWD (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Haloquadratum walsbyi (strain DSM 16790) GN=gpmI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 50/154 (32.47%), Postives = 75/154 (48.70%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGP-GLPDNVKFRADLPNGGLANVAATFINLHGYEAPS 469
            T++  P M + E+ + A + I +     + +N  N DMVGHTGD  A + A ++ D  +  +++ I   GG  +VTADHGNA++M     +  P          T+HT  PVPI    P G  D    R     G L ++A T + L   E P+
Sbjct:  357 TYDQQPSMSSNEVTDTAIEQINTTDPDVLILNYANPDMVGHTGDFTAAIEAIESVDTQLDRLLETIYAAGGHVIVTADHGNADNM---GTAANP---------HTAHTTNPVPIVYTRPDGNGDGDTIR---DGGSLCDIAPTVLELLSVEQPA 495          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_DESVH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=gpmI PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.622e-12
Identity = 48/151 (31.79%), Postives = 74/151 (49.01%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEA 463
            T++  P+M A  + +   +      +     N+ N DMVGHTG I A V AC+  D  V+ I DA+   GG  ++TADHGNAE+++  ++SG P          T+H++  VP  +   G     +       G L ++A T + L G  A
Sbjct:  365 TYDLKPEMSAEAVTDTLLEEWAGGGYTLAVCNVANLDMVGHTGVIPAAVRACETVDACVRRIADAVLASGGRLVITADHGNAEELL--DESGNP---------QTAHSMNRVPFTVVEQG-----RVHTFREGGVLGDIAPTILGLWGVPA 499          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_FLAPJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12
Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAP 466
            T++  P+M A E+ E     I       + +N  N DMVGHTG + A + AC+A ++ V+ +I A        +V ADHGN E M+  N  G P          T+HT  PVPI +    L         + +G L ++A T ++L G + P
Sbjct:  363 TYDLQPEMSAYELTEALIPEIEKTEADFICLNFANGDMVGHTGIMSAAIKACQAVNKCVEKVITAALAHNYTTIVIADHGNCETMI--NPDGTP---------NTAHTTNPVPIILVDKEL-------KTIHDGVLGDIAPTILDLMGIKKP 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HALSA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Halobacterium salinarium GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12
Identity = 46/153 (30.07%), Postives = 71/153 (46.41%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPS 469
            T++  P M A  + +    A+       + +N  N DMVGHTGD +A + A +A D  +  ++ A+   G    +TADHGNA+D+      G P          T+HT  PVP     P   D    R     G L ++A T +++ G + P+
Sbjct:  362 TYDEQPAMSAPAVTDTVLDALAGDDPDVLVLNYANPDMVGHTGDFDAAIEAVEAVDRELGRLVPALNDAGAHAFLTADHGNADDL------GTP------ADPHTAHTFNPVPFVSLPPASGDTAAVR---DGGALRDIAPTLLDVLGIDRPT 499          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HELHP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter hepaticus GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 48/159 (30.19%), Postives = 81/159 (50.94%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            T++  P+M A  + +   KA+  + +  V VN  N DMVGHTG++EA + A +A D+ +  I+++ +K      +T+DHGN E+M           KD    +LT+HT+  V       G+ + V   + + NGGL N+A + +       P + +  L
Sbjct:  350 TYDLQPQMNASAVGDAVIKAV-EQGYDFVVVNFANGDMVGHTGNLEAAIKAVEAVDKELGRIVESAQKHHYALFITSDHGNCEEM-----------KDEKGNMLTNHTVGQVWCF----GMIEGV---SKIENGGLNNIAPSVLKAMNLPIPPEMDKPL 489          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_CLOK5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 46/154 (29.87%), Postives = 75/154 (48.70%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M A E+       +   ++  + +N  N DMVGHTG  +A   A +  DE +  I+  I +  G   +TADHGN+E MV  + +G P         +T+HT   VP         ++ + R D   G LA+++ T + + G E P +
Sbjct:  364 TYDLKPEMSAREVTSTVLDRLDQDKYDMIILNFANPDMVGHTGIFQAAKKAIEVVDECLGRIVSKILEKNGTVFITADHGNSEQMVDYS-TGNP---------MTAHTTNSVPFLYVS---KNSTELRKD---GILADISPTILQVMGLEKPKE 501          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_ARCB4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Arcobacter butzleri (strain RM4018) GN=gpmI PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12
Identity = 48/160 (30.00%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 490
            T++  P+M A E+    + A ++     + VN  N DMVGHTG  EA V A +A D  +  I +  +K     ++T+DHGN E           ++KD    +LT+HT+  V   +  P +        ++  G L N+A T + L   E P + +  LI
Sbjct:  351 TYDLKPEMSAPEVGSAVRTA-MNNNIDFIVVNFANGDMVGHTGVFEAAVKAVEAVDFELGQIFELAKKQNYNIILTSDHGNCE-----------MMKDDEGNILTNHTVGDVYCFVYSPKV-------KEVKTGSLNNIAPTVLKLMNLEIPKEMDEPLI 491          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_BACFR7.282e-1333.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_BACFN7.282e-1333.122,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELAH9.511e-1332.102,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALWD1.622e-1232.472,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_DESVH1.622e-1231.792,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_FLAPJ2.119e-1232.242,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HALSA2.767e-1230.072,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_HELHP3.614e-1230.192,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_CLOK53.614e-1229.872,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ARCB43.614e-1230.002,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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