EY685074

Overview
NameEY685074
Unique NameEY685074
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12501 contig Csv1_Contig12501:1252..1976. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_HELPJ (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Helicobacter pylori J99 GN=gpmI PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11
Identity = 44/129 (34.11%), Postives = 66/129 (51.16%), Query Frame = 2
Query:  101 VNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSL 487
            VN  N DMVGHTG+ EA++ A +A D  +  I+   +++    L+T+DHGN E M           KD N   LT+HT   V   + G G+         + NG L N+A++ + L G +AP+  +  L
Sbjct:  380 VNFANGDMVGHTGNFEASIKAVEAVDACLGEILSLAKELDYAMLLTSDHGNCERM-----------KDENQNPLTNHTAGSVYCFVLGNGV-------KSIKNGALNNIASSVLKLMGIKAPATMDEPL 490          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_UREU1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ureaplasma urealyticum serovar 10 (strain ATCC 33699 / Western) GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 50/160 (31.25%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRF-HQVR-VNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPS 484
            T++  P+M A  I     K I+   F H V  VN  N DMVGH+G+++ T+ A  + D  ++ + D  +K  G+ ++T DHGNAE M+           D N Q++TSH++  V   I      DN           LAN+A T +     + P +   S
Sbjct:  355 TYDLCPQMSASLIT----KTIIDHYFDHDVFIVNYANPDMVGHSGNMKQTIQAILSVDSEIQKLYDFFKKNNGVLMITGDHGNAETMI-----------DANGQIITSHSINDVWFII-----TDNNIVFDQTQKFSLANIAPTILEYLNIKKPIEMAAS 494          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCGE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma genitalium GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.996e-11
Identity = 48/154 (31.17%), Postives = 69/154 (44.81%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSD 472
            T++  P+M    I +   + +    F    +N  N DMVGHTG+ +A + A +A D  +K I+D  +       +TADHGNAE M+           D N   +T HT+ PVP          NV F      G LAN+A T +       P +
Sbjct:  363 TYDLAPEMSCKAITDALLEKL--NNFDFTVLNFANPDMVGHTGNYQACIKALEALDVQIKRIVDFCKANQITMFLTADHGNAEVMI-----------DNNNNPVTKHTINPVPFVC----TDKNVNFN---QTGILANIAPTILEYLNLSKPKE 496          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCMO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma mobile GN=gpmI PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 50/160 (31.25%), Postives = 76/160 (47.50%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYEPSLI 490
            +F   P+M A  I +     +   ++  + +N  N DMVGHTG+++AT+ A +  D     I+ AIEK      +TADHGNAE  +  +++G P          T HT  PV + +    L         L +G LAN+A T ++      P +   SLI
Sbjct:  364 SFADYPEMSAAGITDTLIANL--GKYDVIILNYANPDMVGHTGNLKATIKALEFLDFQYGKILKAIEKTNHTLFITADHGNAE--ITEDENGNP---------ATKHTTSPVMLIVTDKNL--------KLNSGTLANIAPTILDYLKIPKPKNMLDSLI 502          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_UREPA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ureaplasma parvum GN=gpmI PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRF-HQVR-VNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFI 442
            T++  P+M A  I     K I+   F H V  VN  N DMVGH+G+++ T+ A  + D  ++ + D  EK  G+ ++T DHGNAE M+           D   QV+TSH++  V   I      DN           LAN+A T +
Sbjct:  355 TYDLCPQMSAHLIT----KTIIDHYFDHDVFIVNYANPDMVGHSGNMQQTIEAILSVDHEIRKLYDFFEKNNGVLMITGDHGNAEMML-----------DDQKQVITSHSVNDVWFII-----TDNKVILNSTQKFSLANIAPTIL 480          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_UREP2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ureaplasma parvum serovar 3 (strain ATCC 27815 / 27 / NCTC 11736) GN=gpmI PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 2
Query:   11 TFNALPKMKALEIAERAKKAILSRRF-HQVR-VNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFI 442
            T++  P+M A  I     K I+   F H V  VN  N DMVGH+G+++ T+ A  + D  ++ + D  EK  G+ ++T DHGNAE M+           D   QV+TSH++  V   I      DN           LAN+A T +
Sbjct:  355 TYDLCPQMSAHLIT----KTIIDHYFDHDVFIVNYANPDMVGHSGNMQQTIEAILSVDHEIRKLYDFFEKNNGVLMITGDHGNAEMML-----------DDQKQVITSHSVNDVWFII-----TDNKVILNSTQKFSLANIAPTIL 480          
BLAST of EY685074 vs. ExPASy Swiss-Prot
Match: GPMI_MYCH2 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mycoplasma hyopneumoniae (strain 232) GN=gpmI PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.902e-11
Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 2
Query:   26 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKSGEPLLKDGNIQVLTSHTLKPVPIAIGGPGLPDNVKFRADLPNGGLANVAATFINLHGYEAPSDYE 478
            P+M A+EI ++  +  + +++  + +N  N DMVGHTGD++AT+ A +  D  +  I    E+    + +TADHGNAE           L +D N    T HT  PV +      +         L +G LAN+A T ++  G +   D +
Sbjct:  374 PQMSAVEITDKLLE--VGQKYDFIIMNFANPDMVGHTGDLKATIKAVEILDFQIGRICKWAEEKNFDFFITADHGNAE-----------LTEDENGNPSTKHTTFPVMLISSDKTI--------KLKSGKLANIAPTILDYLGLDKHPDMD 503          
The following BLAST results are available for this feature:
BLAST of EY685074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
GPMI_HELPJ1.052e-1134.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_UREU13.059e-1131.252,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCGE3.996e-1131.172,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCMO5.219e-1131.252,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_UREPA8.902e-1133.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_UREP28.902e-1133.562,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_MYCH28.902e-1130.462,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-008-D10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY685074 ID=EY685074; Name=EY685074; organism=Citrus sinensis; type=EST; length=725bp
TTCTGGAATTACTTTCAATGCACTGCCCAAGATGAAGGCTTTGGAGATTG
CTGAGAGGGCAAAGAAGGCCATCCTTAGTCGCAGGTTCCACCAGGTACGT
GTTAACCTACCAAATAGTGACATGGTGGGGCACACGGGAGATATTGAGGC
AACAGTGGTGGCATGCAAGGCTGCTGATGAAGCTGTCAAGATAATCATTG
ATGCAATAGAGAAAGTTGGTGGAATATATCTTGTTACTGCAGATCATGGC
AATGCTGAGGACATGGTCAAGAGGAACAAATCTGGGGAGCCTCTTCTTAA
GGATGGCAATATTCAAGTGCTCACGTCTCACACTCTTAAACCCGTTCCCA
TTGCAATCGGAGGTCCTGGACTGCCAGATAATGTCAAGTTCCGCGCAGAT
CTCCCTAATGGTGGGCTCGCCAATGTAGCAGCAACTTTTATCAATCTCCA
TGGATATGAAGCACCTAGTGACTACGAGCCAAGTCTTATTGAAGTAACTG
ACGACTGAGAAGTAACTGACGACTGGGCGAACAATGGATCGTCGCCTAGA
TTTTATAACTCCGGAGGACTTCCGTTAAAACGTAAAACAATAAATTGAAT
TTTGGGGTCTTGAATTCATTTTGATACGCGTGCTGTTTTTCAGCTTACAT
TTCCATTGCTGTCTGTTGGAGGCAGACAGAACAATATAGCTCCAAATTTA
TTTTTGTTAAAAAAAAAAAAAAAAA
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